T-COFFEE, Version_10.00.r1552 (2013-04-30 12:41:06 - Revision 1552 - Build 376)
Cedric Notredame
CPU TIME:0 sec.
SCORE=84
*
BAD AVG GOOD
*
gi|398923423|gb : 86
SPP00000862_2.0 : 84
SPP00001557_2.0 : 83
SPP00000054_2.0 : 86
cons : 84
gi|398923423|gb MASEGPREPAGEGLKLSADVKPFVPKFAGLRVA
SPP00000862_2.0 -----------KNVKLSAEVEPFIPQKKNPDTF
SPP00001557_2.0 -----------KNVKLSAEVEPFVPQKKNLDAF
SPP00000054_2.0 MASEGPREPESEGIKLSADVKPFVPRFAGLNVA
cons :.:****:*:**:*: . .
gi|398923423|gb WS-----------ESSEARVFPSCAATYYPCVQ
SPP00000862_2.0 MIPMALPNENGNVSGVEPTPIPSYLITCYPFVQ
SPP00001557_2.0 VLPMALPSDNGSVSGVEPTPIPSYLITCYPFVQ
SPP00000054_2.0 WL-----------ESSEACVFPSSAATYYPFVQ
cons .. *. :** * ** **
gi|398923423|gb GLPVPEQ-KFYTEDMAFGASTFPPQ--YLSSEL
SPP00000862_2.0 ENQSNRQFPLYNNDIRWQQPNPNPAGPYLAYPI
SPP00001557_2.0 ENQSNRQFPLYNNDIRWQQPSPSPTGPYLAYPI
SPP00000054_2.0 EPPVTEQ-KIYTEDMAFGASTFPPQ--YLSSEI
cons .* :*.:*: : .. * **: :
gi|398923423|gb -ALHPYTYPPYTLEST-QNVCPVPASQYD---Y
SPP00000862_2.0 ISAQ----PPVSTEYTYYQLMPAPCAQVMGFYH
SPP00001557_2.0 ISAQ----PPVSTEYTYYQLMPAPCAQVMGFYH
SPP00000054_2.0 -TLHPYAYSPYTLDST-QNVYSVPGSQYL---Y
cons : : .* : : * :: ..* :* :
gi|398923423|gb SQPNCY-------------------------QG
SPP00000862_2.0 PFPTPYSNTFQAANAVNTITTECTERPNQLGQV
SPP00001557_2.0 PFPTPYSSTFQAANTVNAISTECTERPNQLGQA
SPP00000054_2.0 NQPSCY-------------------------RG
cons *. * :
gi|398923423|gb FQRM--RPRNEH---VCPPPQDTKALFKVSTFL
SPP00000862_2.0 FPLSSHRSRNSNRGPVVPKQQLLQQHIKSKRPL
SPP00001557_2.0 FPLSSHRSRNGNRGPVVPKPQLLQQHIKNKRPQ
SPP00000054_2.0 FQTV--KHRNEN---TCPLPQEMKALFKKKTYD
cons * : ** : . * * : :* .
gi|398923423|gb QKKTYDEQKFDSKKVGGTMSSDIKSFKGPH---
SPP00000862_2.0 VKNVATQKE--------------TNAAGPDNRS
SPP00001557_2.0 VKNVATQKE--------------TSATGPDSRS
SPP00000054_2.0 EKKTYDQQKFDSERADGTISSEIKSARGSH---
cons *:. ::: .. *..
gi|398923423|gb RVSIHADSSLKSDGYHKRTDRKSRIVEKSGSAS
SPP00000862_2.0 KIVLLVDAS-------QQ---------------
SPP00001557_2.0 KIVLLVDAS-------QQ---------------
SPP00000054_2.0 HLSIYAENSLKSDGYHKRTDRKSRIIAKNVSTS
cons :: : .: * ::
gi|398923423|gb KPEFEFTRLDFPELQGPENREISETQKQPTWGP
SPP00000862_2.0 --------TDFPSD--IANKSLSESSATMLWK-
SPP00001557_2.0 --------TDFPSD--IANKSLSESTATMLWK-
SPP00000054_2.0 KPEFEFTTLDFPELQGAE-NNMSEIQKQPKWGP
cons ***. ..:** *
gi|398923423|gb LCPASTDISLLREVGKPAAVV------------
SPP00000862_2.0 ---------------------SKGRRRRASHPT
SPP00001557_2.0 ---------------------AKGRRRRASHPA
SPP00000054_2.0 VHSVSTDISLLREVVKPAAVLSKGEIVVKNNP-
cons
gi|398923423|gb ---------------------SEEL-SWTPMGY
SPP00000862_2.0 AESSSEQGASEADIDSDSGYCSPKHSNNQPAAG
SPP00001557_2.0 VESSSEQGASEADIDSDSGYCSPKH-NNQSAPG
SPP00000054_2.0 ------NESVTANAATNSPSCTREL-SWTPMGY
cons : : . .
gi|398923423|gb VVRQTLSAELSPAPKNVTSTINLKTLASAADPK
SPP00000862_2.0 ALRNPDSSTMSVCNIALICGVNWSNVTCQATQK
SPP00001557_2.0 ALRDPASGTMNVRYLSVSSGVNWPKVTCQATQK
SPP00000054_2.0 VVRQTLSTELSAAPKNVTSMINLKTIASSADPK
cons .:*:. * :. : . :* .::. * *
gi|398923423|gb NARMSSSEVLSSDPSYK-EKHVAHHTKKSK-AS
SPP00000862_2.0 KPWMEKNQTFSRGGRQTEQRNNSQVGFRCRGHS
SPP00001557_2.0 RPWMEKNQAFSRGGRQTEQRNNLQVGFRCRGHS
SPP00000054_2.0 NVSIPSSEALSSDPSYNKEKHIIHPTQKSK-AS
cons . : ..:.:* . . ::: : :.: *
gi|398923423|gb QGGDPEQNEASRKSKKKKEKSKSKYEVLTVQEP
SPP00000862_2.0 TSSERRQNLQKRQDNKQLNPSQS-HRGNPNSES
SPP00001557_2.0 TSSERRQNLQKRQDNKHLNSTQS-HRSDPNSES
SPP00000054_2.0 QGSDLEQNEASRKNKKKKEKSTSKYEVLTVQEP
cons ..: .** .*:.:*: : : * :. . .*.
gi|398923423|gb PRIEDA---------------------------
SPP00000862_2.0 LYFE---------------------------LD
SPP00001557_2.0 LYFEDEDGFQELSENGNSKDENIQQKLSSKVLD
SPP00000054_2.0 PRIEDA---------------------------
cons :*
gi|398923423|gb ---------------------------EEFPNL
SPP00000862_2.0 DLPENSPINIVQTPIPITTSVPKRAKSQKKKAL
SPP00001557_2.0 DLPENSPINIVQTPIPITTSVPKRAKSQKKKAL
SPP00000054_2.0 ---------------------------EEFPNL
cons :: *
gi|398923423|gb AVASERRDRVESPKFQSKQQPQNNFKNSGKKSQ
SPP00000862_2.0 AAALATAQEYSEISMEQKKLQVHFMYNS-WKKN
SPP00001557_2.0 AAALATAQEYSEISMEQKKLQEALSKAAGKKTK
SPP00000054_2.0 AVASERRDRIETPKFQSKQQPQDNFKNNVKKSQ
cons *.* :. . .::.*: *.:
gi|398923423|gb TPVQLDLGGMLTALEKKQHSQNAKQP--SKPVV
SPP00000862_2.0 KPCAAELEDMLAALENTQ-AMKARQITNTRPLS
SPP00001557_2.0 TPVQLDLGDMLAALEKQQQAMKARQITNTRPLA
SPP00000054_2.0 LPVQLDLGGMLTALEKKQHSQHAKQS--SKPVV
cons * :* .**:***: * : :*:* ::*:
gi|398923423|gb FSVGAVPVL-SKEATSGKKGHRFSEVKTPHNPL
SPP00000862_2.0 CTVVTAASFHTKDSTNRKPLTKSQPCLTSFNSL
SPP00001557_2.0 HPVVTTATFHTKD-SNRKTLAKSQPCVTSFNSL
SPP00000054_2.0 VSVGAVPVL-SKECASGERGRRMSQMKTPHNPL
cons .* :.. : :*: :. : : . *..*.*
gi|398923423|gb DSSAPLMKKGKQREVPKAKKPTSLKKIILKERQ
SPP00000862_2.0 DITSSKAKKGKEKEIAKLKRPTALKKVILKERE
SPP00001557_2.0 DITSSKAKKGKEKEIAKLKRPTALKKVILKERE
SPP00000054_2.0 DSSAPLMKKGKQREIPKAKKPTSLKKIILKERQ
cons * ::. ****::*:.* *:**:***:*****:
gi|398923423|gb ERKQQRL-QENAMS---------PAFASDGAQD
SPP00000862_2.0 EKKG-RLTVDHNLLGSEEPVEMHLDFIDDLPQE
SPP00001557_2.0 EKKG-RLIVEHSVLGAEEPTETHLDLTNDLPQE
SPP00000054_2.0 ERKQ-RL-QENAVS---------PAFTSDDTQD
cons *:* ** :: : : .* .*:
gi|398923423|gb AESGGDDWALEQVDPS-APEEMEEAVSSTPVVE
SPP00000862_2.0 IVSQEDTGLSMPSDTSLSPASQNSPYCMTPVSQ
SPP00001557_2.0 TVSQEDAGLSMPSDASLSPASQNSPYCMTPVSQ
SPP00000054_2.0 GESGGDDQFPEQAELS-GPEGM-DELISTPSVE
cons * * : * .* . ** :
gi|398923423|gb S-KSEEPLGAELQKEVEACHLAPGSAACPRIHS
SPP00000862_2.0 GSPASSGIGSPM-----------ASSTITKIHS
SPP00001557_2.0 GSPASSGIGSPM-----------ASSTITKIHS
SPP00000054_2.0 D-KSEEPPGTELQRDTEASHLAPNHTTFPKIHS
cons . :.. *: : :: .:***
gi|398923423|gb RRFRDYCSQILSKEVDACVTDLLKELVRFQDRM
SPP00000862_2.0 KRFREYCNQVLCKEIDECVTLLLQELVSFQERI
SPP00001557_2.0 KRFREYCNQVLSKEIDECVTLLLQELVSFQERI
SPP00000054_2.0 RRFRDYCSQMLSKEVDACVTDLLKELVRFQDRM
cons :***:**.*:*.**:* *** **:*** **:*:
gi|398923423|gb YQKDPVKARTKRRLVLGLREVLKHLKLRKLKCI
SPP00000862_2.0 YQKDPVRAKARRRLVMGLREVTKHMKLNKIKCV
SPP00001557_2.0 YQKDPVRAKARRRLVMGLREVTKHMKLNKIKCV
SPP00000054_2.0 YQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCV
cons ******:*:::****:***** **:**.*:**:
gi|398923423|gb IISPNCEKIQSKGGLDDTLHTIIDYACEQNIPC
SPP00000862_2.0 IISPNCEKIQSKGGLDEALYNVIAMAREQEIPF
SPP00001557_2.0 IISPNCEKIQSKGGLDEALYNVIAMAREQEIPF
SPP00000054_2.0 IISPNCEKIQSKGGLDDTLHTIIDYACEQNIPF
cons ****************::*:.:* * **:**
gi|398923423|gb VFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQ
SPP00000862_2.0 VFALGRKALGRCVNKLVPVSVVGIFNYFGAESL
SPP00001557_2.0 VFALGRKALGRCVNKLVPVSVVGIFNYFGAESL
SPP00000054_2.0 VFALNRKALGRSLNKAVPVSVVGIFSYDGAQDQ
cons ****.******.:** *********.* **:.
gi|398923423|gb FHKMVELTMAARQAYRTMLENVHQELVGEPGPQ
SPP00000862_2.0 FNKLVALTEEARRAYKDMVAALEQEQAEEASKN
SPP00001557_2.0 FNRLVELTEEARKAYKDMVAATEQEQAEEALRS
SPP00000054_2.0 FHKMVELTVAARQAYKTMLENVQQELVGEPRPQ
cons *:::* ** **:**: *: .** . *. .
gi|398923423|gb APAGPPTQG-----------PGCSAEDGPLAPA
SPP00000862_2.0 VKKGPHHMGHSRNPSAASAISFCSVISEPISEV
SPP00001557_2.0 VKTVPHHMGHSRNPSAASAISFCSVISEPISEV
SPP00000054_2.0 APPSLPTQG-----------PSCPAEDGPPALK
cons . * . *.. . * :
gi|398923423|gb GKEEPHYIEIWRRHLEAY---------------
SPP00000862_2.0 N--EKEYETNWRNMVETSDGLETSENEREISCK
SPP00001557_2.0 N--EKEYETNWRSMVETSDGLEPSEMEKAAPCT
SPP00000054_2.0 EKEEPHYIEIWKKHLEAY---------------
cons * .* *: :*:
gi|398923423|gb ---------------------------------
SPP00000862_2.0 HSTSEKPSKAPFDTAPVGKQPSLVAAGSATSAT
SPP00001557_2.0 HSPPEKPSRLALDTSLVGKQLPL-AAGSITSAP
SPP00000054_2.0 ---------------------------------
cons
gi|398923423|gb --------------------------------G
SPP00000862_2.0 NPGKATVSEKEEVKPDDLEWASQQSTETGSLDG
SPP00001557_2.0 SQGKPT-GDKDELKPDDLEWASQQSTETGSLDG
SPP00000054_2.0 --------------------------------S
cons .
gi|398923423|gb RCALELEESLEASTSQM----------------
SPP00000862_2.0 SCRDLLNSSITSTTSTLVPGMLEEEDDEEEEEE
SPP00001557_2.0 SCRDLLNSSITSTTSTLVPGMLEEEEDEEE-EE
SPP00000054_2.0 GCTLELEESLEASTSQM----------------
cons * *:.*: ::** :
gi|398923423|gb -----------------------------RALN
SPP00000862_2.0 EDYTHEPISVEVQLNSRIESWVSETQRTMETLQ
SPP00001557_2.0 EDYSHEPTAEEVQLNSRIESWVSETQRTMETLQ
SPP00000054_2.0 -----------------------------MNLN
cons *:
gi|398923423|gb ---------------------------------
SPP00000862_2.0 LGKTLNGSEEDNAEPSGEEEAEAPEVLEPRMDS
SPP00001557_2.0 L--------------------------------
SPP00000054_2.0 L--------------------------------
cons
gi|398923423|gb ---------------------L
SPP00000862_2.0 ETWTTDHHANQEQQKPSSCSSL
SPP00001557_2.0 ---------------------G
SPP00000054_2.0 ---------------------X
cons