T-COFFEE, Version_10.00.r1552 (2013-04-30 12:41:06 - Revision 1552 - Build 376)
Cedric Notredame
CPU TIME:0 sec.
SCORE=87
*
BAD AVG GOOD
*
gi|398923877|gb : 72
SPP00000891_2.0 : 87
SPP00001600_2.0 : 89
SPP00000146_2.0 : 89
cons : 87
gi|398923877|gb ---------------------------------
SPP00000891_2.0 ------------YVDENFTARALASTGETRISV
SPP00001600_2.0 ---------------------------------
SPP00000146_2.0 MAASLWMGDLEPYMDENFISRAFATMGETVMSV
cons
gi|398923877|gb ---------------------------------
SPP00000891_2.0 KITQNSLTGLPAGCCFVECTDLATAGKCLHKIN
SPP00001600_2.0 ---------IPAGYCFVEFADLATAEKCLHKIN
SPP00000146_2.0 KIIRNRLTGIPAGYCFVEFADLATAEKCLHKIN
cons
gi|398923877|gb ---------------------------PMASLY
SPP00000891_2.0 GKHHLRATPAKCFKVNYATCRKXPNNSPEYCLF
SPP00001600_2.0 GKPLPGATPAKRFKLNYATYGKQPDNSPEYSLF
SPP00000146_2.0 GKPLPGATPAKRFKLNYATYGKQPDNSPEYSLF
cons * .*:
gi|398923877|gb VGDLHSDVTEAMLYEKFSPAGPVLS-IRVMLE-
SPP00000891_2.0 WG-LIQDVDDGKLLEFFIYICRSCQESKVVLDE
SPP00001600_2.0 VGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP
SPP00000146_2.0 VGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ
cons * * ** :. * * * :*:*:
gi|398923877|gb ------DGRSKGFGFVCFSSPEEATKAVTEMNG
SPP00000891_2.0 GYGCIICFMSKSNSFWKFTNEQEQKQTLTKCQE
SPP00001600_2.0 ------TGVSKGYGFVKFTDELEQKRALTECQG
SPP00000146_2.0 ------TGVSKGYGFVKFTDELEQKRALTECQG
cons **. .* *:. * .:::*: :
gi|398923877|gb RI-VGSKPLYVALAQRKEERHHGGDLRHCVQGL
SPP00000891_2.0 AVGRGSKQALLSIAIPNVSHVELVEYS------
SPP00001600_2.0 AVGLGCKPVRLSVAIPKASRVKPVEYS------
SPP00000146_2.0 AVGLGSKPVRLSVAIPKASRVKPVEYS------
cons : *.* :::* : .: . :
gi|398923877|gb PMTFHQCIVQLLALLHELLVGFSHIQLRHRVFQ
SPP00000891_2.0 -----------------QMCSYSYNQYY-----
SPP00001600_2.0 -----------------QMYSYSYNQYY-----
SPP00000146_2.0 -----------------QMYSYSYNQYY-----
cons : .:*: *
gi|398923877|gb CIISNFFICLHGALGIAILGITVAVAACVLVIA
SPP00000891_2.0 ---------------------------------
SPP00001600_2.0 ---------------------------------
SPP00000146_2.0 ---------------------------------
cons
gi|398923877|gb PLGIVVLVLLVILVVAVTVHLTIFHWLHTTRFR
SPP00000891_2.0 -----------------------------QQYQ
SPP00001600_2.0 -----------------------------QQYQ
SPP00000146_2.0 -----------------------------QQYQ
cons :::
gi|398923877|gb DCHAQPHWFRPSYCSLALRQGSLLFFICE--FH
SPP00000891_2.0 NYHSWWGH--------DQSTGSHSNSSSQCGHT
SPP00001600_2.0 NYYAQWGY--------DQNTGSYSYSYPQYGYT
SPP00000146_2.0 NYYAQWGY--------DQNTGSYSYSYPQYGYT
cons : :: ** : .
gi|398923877|gb KTIALRYSCLV-----QNNLASPTGGVDFDE--
SPP00000891_2.0 QSTMQTYSSAPTHMKKLHSIDDPVPQLGVTEAN
SPP00001600_2.0 QSTMQTYEEVG-----DDALEDPAPQLDVTEAN
SPP00000146_2.0 QSTMQTYEEVG-----DDALEDPMPQLDVTEAN
cons :: *. . : .* :.. *
gi|398923877|gb -EFIEHAIVHIWGQVPHKEGVLRAVIWLFPISG
SPP00000891_2.0 KEFIE----------------------------
SPP00001600_2.0 KEFME----------------------------
SPP00000146_2.0 KEFME----------------------------
cons **:*
gi|398923877|gb IVQFKTFCRCGSWKGFPINFMQTLLSCGQICEF
SPP00000891_2.0 ----------------------------QTEEL
SPP00001600_2.0 ----------------------------QSEEL
SPP00000146_2.0 ----------------------------QSEEL
cons * *:
gi|398923877|gb YKAVA--SWDPSEAVSDNFNAHHGLPHGGKGSG
SPP00000891_2.0 YDALMDCHRQT----------------------
SPP00001600_2.0 YDALMDCHWQPLDTVSSEIPA------------
SPP00000146_2.0 YDALMDCHWQPLDTVSSEIPA------------
cons *.*: :.
gi|398923877|gb DEVLIHVGLQVAHPQAGRH
SPP00000891_2.0 -----------------LY
SPP00001600_2.0 ----------------MMX
SPP00000146_2.0 ----------------MMX
cons