T-COFFEE, Version_10.00.r1552 (2013-04-30 12:41:06 - Revision 1552 - Build 376)
Cedric Notredame
CPU TIME:0 sec.
SCORE=99
*
BAD AVG GOOD
*
gi|398920009|gb : 99
SPP00000888_2.0 : 99
SPP00001597_2.0 : 99
SPP00000036_1.0 : 99
cons : 99
gi|398920009|gb ---------------------------------
SPP00000888_2.0 ---------------------------------
SPP00001597_2.0 ---------------------------------
SPP00000036_1.0 MGHVHRLVSGKRRMHLTSRPVASTHSPLILDMC
cons
gi|398920009|gb ---------------------------------
SPP00000888_2.0 ---------------------------------
SPP00001597_2.0 ---------------------------------
SPP00000036_1.0 PHLNNGPMTGCGRAGDPISHARGGVGGRGERLP
cons
gi|398920009|gb ---------------------------------
SPP00000888_2.0 ---------------------------------
SPP00001597_2.0 --------------------PASSPRRPPASRF
SPP00000036_1.0 RGFARVVRVASEGSVRRPSGPVPAP-QPPAFRF
cons
gi|398920009|gb ---PGRARSSRPPAARSPG--------CPPAPG
SPP00000888_2.0 ---------------------------------
SPP00001597_2.0 LSRPGSARSDNKALEKPPSPPPPPRAQTSPGLG
SPP00000036_1.0 VSRPGRARSESETLERSPP--------QSPGPG
cons
gi|398920009|gb PAPPHPCRRTPCGPRCSRCCPXXRRARLSSPGA
SPP00000888_2.0 ---------------------------------
SPP00001597_2.0 KVGVLPNRRLGAVRGGLMSSPPGRRARLASPGT
SPP00000036_1.0 KAGDAPNRRSGHVRGARVLSPPGRRARLSSPGP
cons
gi|398920009|gb GRSSAEAREELRRRLLGLIEGSRVMIFSKSYCP
SPP00000888_2.0 ---------------------------------
SPP00001597_2.0 SRPSSEAREELRRRLRDLIEGNRVMIFSKSYCP
SPP00000036_1.0 SRS-SEAREELRRHLVGLIERSRVVIFSKSYCP
cons
gi|398920009|gb HSARVKELFSSLGVECNILELDQIDDGASVQEV
SPP00000888_2.0 ---QVKELFSSLGVECHILELDQVDDGASVQEV
SPP00001597_2.0 HSTRVKELFSSLGVVYNILELDQVDDGASVQEV
SPP00000036_1.0 HSTRVKELFSSLGVECNVLELDQVDDGARVQEV
cons :********** ::*****:**** ****
gi|398920009|gb LSEITSQRTVPNIFVNKVHMGGCDRTFQAYQSG
SPP00000888_2.0 LSEITNQRTVPNIFVNKVHMGGCEQTFQAHQSG
SPP00001597_2.0 LTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNG
SPP00000036_1.0 LSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSG
cons *:**:.*:***********:***::****:*.*
gi|398920009|gb LLQKLLQGDSAYDYDLIVIGGGSGGLACAQEAA
SPP00000888_2.0 VLEKLLQGDSAYDYDLIVIGGGSGGLACAQEAA
SPP00001597_2.0 LLQKLLQDDSAHDYDLIIIGGGSGGLSCAKEAA
SPP00000036_1.0 LLQKLLQEDLAYDYDLIIIGGGSGGLSCAKEAA
cons :*:**** * *:*****:********:**:***
gi|398920009|gb ILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCI
SPP00000888_2.0 VLGKKVMVLDFVLPSPQGTSWGLGGTCVNVGCI
SPP00001597_2.0 NLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCI
SPP00000036_1.0 ILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCI
cons ***********:******:*************
gi|398920009|gb PKKLMHQAALLGQALVDSRKFGWEYNQQVKHNW
SPP00000888_2.0 PKKLMHQAALLGQALIDSRKFGWEYNQQVKHNW
SPP00001597_2.0 PKKLMHQAALLGHALQDAKKYGWEYNQQVKHNW
SPP00000036_1.0 PKKLMHQAALLGQALCDSRKFGWEYNQQVRHNW
cons ************:** *::*:********:***
gi|398920009|gb ETMTEAIQNHIGSLNWGYRLSLREKAVAYVNSY
SPP00000888_2.0 ETMTEAIQNHIGSLNWGYRLSLREKAVAYVNSY
SPP00001597_2.0 EAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF
SPP00000036_1.0 ETMTKAIQNHISSLNWGYRLSLREKAVAYVNSY
cons *:**:***.**.*******::****.*:****:
gi|398920009|gb GEFVEHHKIKATNRKGQETCYTAAKFVIATGER
SPP00000888_2.0 GEFVEHHKIKATNRKGQETCYTAAKFVIATGER
SPP00001597_2.0 GEFVDLHKIKATNKKGQETFYTASKFVIATGER
SPP00000036_1.0 GEFVEHHKIKATNKKGQETYYTAAQFVIATGER
cons ****: *******:***** ***::********
gi|398920009|gb PRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVG
SPP00000888_2.0 PRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVG
SPP00001597_2.0 PRYLGIQGDKEYCITSDDLFSLPYCPGCTLVVG
SPP00000036_1.0 PRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVG
cons *************************** *****
gi|398920009|gb ASYVALECAGFLAGVGLDVTVMVRSILLRGFDQ
SPP00000888_2.0 ASYVALECAGFLAGLGLDVTVMVRSILLRGFDQ
SPP00001597_2.0 ASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQ
SPP00000036_1.0 ASYVALECAGFLAGFGLDVTVMVRSILLRGFDQ
cons ****.*********.**********:*******
gi|398920009|gb EMAEKVGSYMEQHGVKFLRKFVPVMVQQLEKGS
SPP00000888_2.0 EMAEKVGSYMEQHGVKFLRKFVPVMIQQLEKGS
SPP00001597_2.0 EMAEKVGSYLEQQGVKFQRKFTPILVQQLEKGL
SPP00000036_1.0 EMAEKVGSYMEQHGVKFLRKFIPVMVQQLEKGS
cons *********:**:**** *** *:::******
gi|398920009|gb PGKLKVVAKSTEGPETIEGVYNTVLLAIGRDSC
SPP00000888_2.0 PGKLRVVAESTEGPGAVEGVYNTVLLAIGRDSC
SPP00001597_2.0 PGKLKVVAKSTEGPETVEGIYNTVLLAIGRDSC
SPP00000036_1.0 PGKLKVLAKSTEGTETIEGVYNTVLLAIGRDSC
cons ****:*:*:****. ::**:*************
gi|398920009|gb TKKIGLEKIGVKINEKSGKVPVNDVEQTNVPYV
SPP00000888_2.0 TRKIGLEKIGVKINEKSGKIPVNDVEQTNVPYV
SPP00001597_2.0 TRKIGLEKIGVKINEKNGKIPVNDVEQTNVPHV
SPP00000036_1.0 TRKIGLEKIGVKINEKSGKIPVNDVEQTNVPYV
cons *:**************.**:***********:*
gi|398920009|gb YAIGDVLEGKLELTPVAIQAGKLLARRLFGGRL
SPP00000888_2.0 YAIGDILEGKLELTPVAIQAGKLLARRLFGGRL
SPP00001597_2.0 YAIGDILDGKPELTPVAIQAGKLLARRLFGVSL
SPP00000036_1.0 YAVGDILEDKPELTPVAIQSGKLLAQRLFGASL
cons **:**:*:.* ********:*****:**** *
gi|398920009|gb EK----CDYINVPTTVFTPLEYGCCGLSEEKAI
SPP00000888_2.0 EKASFLCDYINVPTTVFTPLEYGCCGLSEEKAI
SPP00001597_2.0 EK----CDYINIPTTVFTPLEYGCCGLSEEKAI
SPP00000036_1.0 EK----CDYINVPTTVFTPLEYGCCGLSEEKAI
cons ** *****:*********************
gi|398920009|gb EVYKKENLEVYHTLFWPLEWTVAGRDNNTCYAK
SPP00000888_2.0 EVHKKENLEVYHTLFWPLEWTVAGRDNNTCYAK
SPP00001597_2.0 EMYKKENLEVYHTLFWPLEWTVAGRDNNTCYAK
SPP00000036_1.0 EVYKKENLEIYHTLFWPLEWTVAGRENNTCYAK
cons *::******:***************:*******
gi|398920009|gb IICNKFDNDRVIGFHILGPNAGEVTQGFAAAMK
SPP00000888_2.0 IICNKFDNERVVGFHILGPNAGEVTQGFAAAMK
SPP00001597_2.0 IICNKFDNERVVGFHLLGPNAGEITQGFAAAMK
SPP00000036_1.0 IICNKFDHDRVIGFHILGPNAGEVTQGFAAAMK
cons *******::**:***:*******:*********
gi|398920009|gb CGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGL
SPP00000888_2.0 CGLTKQLLDDTIGIHPTCGEVFTTLEITKASGL
SPP00001597_2.0 CGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGL
SPP00000036_1.0 CGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGL
cons *****************************:***
gi|398920009|gb DITQEGC--G
SPP00000888_2.0 DITQKGCXGX
SPP00001597_2.0 DITQKGC-XG
SPP00000036_1.0 DITQKGCXGX
cons ****:**