
genewise output
Score 163.29 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00001576_2.0   39 RVYGRHAAALSQALQLEAPELPVQVNPSKPRRGSFEVTLLRSDNS     
                     RVYGR+AAALSQAL+LEAPELPV+VNP+KPRRGSFEVTLLR D S     
                     RVYGRNAAALSQALRLEAPELPVKVNPAKPRRGSFEVTLLRPDGS     
gi|398921812|gb50216 cgtgcagggcacgcccggcgccgagacgaccagatggaccccgga     
                     gtaggaccctgactgtaccatctataccacggggtatcttgcagg     
                     cccgcccgcgcgggcggccggagggctcgcggcccgggggccccc     


SPP00001576_2.0   84                           VELWTGIKKGPPRKLKFPEPQEV 
                                               VELWTGIKKGPPRKLKFPEPQEV 
                               R:S[agt]        VELWTGIKKGPPRKLKFPEPQEV 
gi|398921812|gb50351 AGTGAGTG  Intron 1   CAGGTggctagaaagcccacatcgccgg 
                      <1-----[50352:50490]-1>  tatgcgtaagccgatatcacaat 
                                               ggcgtgcgggcacacgctgtagg 


SPP00001576_2.0  108 VEELKKYLS                                         
                     VEELKKYLS                                         
                     VEELKKYLS                                         
gi|398921812|gb50562 gggcaatct                                         
                     taataaatc                                         
                     ggggggctg                                         


//
Making a S in phase 1 intron
>gi|398921812|gb|JH767791.1|:subseq(1259566,100588).pep
RVYGRNAAALSQALRLEAPELPVKVNPAKPRRGSFEVTLLRPDGSSVELWTGIKKGPPRK
LKFPEPQEVVEELKKYLS
//
