------- SECIS element -- id:1 -- grade:A ----
 Chromosome = gi|385726810|gb|JH655918.1|:subseq_3991284,150074_ Strand = + Positions = 52135 - 52210
 Found by:  Infernal (score=38.39) Covels (score=37.49)
 Stem2 length = 11   Apical loop length = 18   Insertion in stem2 = 0, 0
 Free Energy = -20.67

         ..(((((((.......(((((((((((((((..................)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcC---cuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ..((([(((---....{[[{(((((((((((..................)))))))))))}]]}..--....)))])))..
 target  CACAGACGC---UUCAUGAUGGGAAGGACUGAAAUGUCUCAUGGACGCCUGGUCUUUCCCUGAUGU--UCUUGCGGCUGCC
                         ****           ^^^                          ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = gi|385726810|gb|JH655918.1|:subseq_3991284,150074_ Strand = - Positions = 132226 - 132154
 Found by:  Infernal (score=12.52) Covels (score=11.41)
 Stem2 length = 10   Apical loop length = 10   Insertion in stem2 = 1, 0
 Free Energy = -12.1

         ..(((((((.......((((((((((((.(((...............)))))))))))))))...........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggc-ccuAAAcCcuuuuuggggcgggccaggcCuGAUGuu--u-uuucaugaccggc
         ((([{((((---(...{[[{(((({(((.(((........-----..))))))}))))}]]}.......-..)))))}])))
 target  UCCACUCCC---UAUAUGAUUUUUCAAGUUGGUCACCUUC-----CCUCACUUUGAGAUGAUGAUGGUA-CCAGGGAAGGGA
                         ****               ^^                     ****