genewise output Score 244.83 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000137_2.0 5 AGQRDYDLLVVGGGSGGLACAKE AG+ DYDL+V+GGGSGGLAC+KE AGKYDYDLVVIGGGSGGLACSKE A:A[gct] BADN01034111.1 1694 ggatgtgcggagggtggcgttagGGTGAGAT Intron 1 CAGCT cgaaaaattttgggcggtcgcaa <1-----[1764 : 1862]-1> aggtctcggttctgaagtctcaa SPP00000137_2.0 29 AQLGRKVAVVDYVEPSPQ TRWGL AQLG+KVAV+DYVEPS + T+WG+ AQLGQKVAVLDYVEPSVK G:G[ggc] TKWGI BADN01034111.1 1865 gctgcagggtgtggctgaGGTAAGAT Intron 2 CAGGCaatga catgaatcttaataccta <1-----[1920 : 2042]-1> caggt aggagatttattggatta cggtt SPP00000137_2.0 53 GGTCVNVGCIPKKLMHQAALLGGLIQDAPNYGWEVAQPVPHD GGTCVNVGCIPKKLMHQAALLG ++DA YGW+++ P+ HD GGTCVNVGCIPKKLMHQAALLGAAVKDAKKYGWQISGPICHD BADN01034111.1 2060 ggatgaggtacaacaccggccggggaggaatgtcatgcatcg ggcgtatggtcaattaaccttgcctaacaaaggatcgctgaa tcgttttccttggcgtgttatctacattggtcggcagacctc SPP00000137_2.0 95 RKMAEAVQNHVKSLNWGHRVQLQ MAEAVQNHV+SLNWGHRVQLQ W:W[tgg] ATMAEAVQNHVRSLNWGHRVQLQ BADN01034111.1 2186 TGGTAGGTC Intron 3 CAGGgaaggggcacgctcatgccgccc <2-----[2188 : 3050]-2> cctcactaaatgctaggagtata ccgagttacccgtccgtcatgcg SPP00000137_2.0 119 D KVKYFNIKASFVDEHTVCGVAK D KVKY+NIK S++DEHTV G+ K D R:K[aag] KVKYLNIKGSLLDEHTVKGLTK BADN01034111.1 3121 gAAGTAAGTG Intron 4 CAGGagatcaaagactggcagagcaa a <2-----[3126 : 4672]-2> ataatataggttaaactagtca c ggatgccaacggtacccaaaca SPP00000137_2.0 143 GGKE ILLSADHIIIATGGRPRYPTHI GKE +L+A +I+IATGGRP+YPT++ AGKE TILTAKNIVIATGGRPKYPTNV BADN01034111.1 4740 ggagGTGGGCA Intron 5 CAGaacagaaagagaggccatcaag cgaa<0-----[4752 : 5276]-0>cttccaatttccgggcaaccat agag gcgtcgttgttgtagggccata // Making a A in phase 1 intron Making a G in phase 1 intron Making a W in phase 2 intron Making a K in phase 2 intron >BADN01034111.1.pep AGKYDYDLVVIGGGSGGLACSKEAAQLGQKVAVLDYVEPSVKGTKWGIGGTCVNVGCIPK KLMHQAALLGAAVKDAKKYGWQISGPICHDWATMAEAVQNHVRSLNWGHRVQLQDKKVKY LNIKGSLLDEHTVKGLTKAGKETILTAKNIVIATGGRPKYPTNV // >BADN01034111.1.[1694:5342].sp GCAGGGAAGTATGACTATGACCTGGTGGTTATTGGCGGTGGGTCAGGAGGGCTTGCCTGT TCCAAAGAAGCTGCACAGTTGGGACAGAAAGTTGCTGTTTTAGATTATGTGGAGCCATCT GTTAAAGGCACCAAGTGGGGTATTGGTGGCACGTGTGTTAATGTTGGCTGCATTCCTAAG AAGCTCATGCATCAGGCTGCTCTACTTGGCGCTGCAGTCAAAGATGCTAAGAAGTATGGC TGGCAGATCTCAGGGCCAATCTGCCATGACTGGGCCACCATGGCAGAGGCTGTTCAAAAC CACGTCCGGTCTCTCAACTGGGGTCACCGAGTTCAGCTCCAGGACAAGAAGGTGAAATAT CTGAACATCAAAGGAAGCCTGTTGGATGAACACACCGTCAAAGGACTAACCAAAGCAGGG AAAGAGACGATCCTGACTGCCAAGAATATTGTGATTGCTACGGGTGGACGGCCGAAGTAC CCCACAAATGTA // BADN01034111.1 GeneWise match 1694 5342 244.83 + . BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise cds 1694 1763 0.00 + 0 BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise intron 1764 1862 0.00 + . BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise cds 1863 1919 0.00 + 2 BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise intron 1920 2042 0.00 + . BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise cds 2043 2187 0.00 + 2 BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise intron 2188 3050 0.00 + . BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise cds 3051 3125 0.00 + 1 BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise intron 3126 4672 0.00 + . BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise cds 4673 4751 0.00 + 1 BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise intron 4752 5276 0.00 + . BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise cds 5277 5342 0.00 + 0 BADN01034111.1-genewise-prediction-1 // genewise output Score 14.02 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000137_2.0 209 GIGLDTTIM G+GLD +M GLGLDLPVM BADN01034111.1 -2206 gcgtgccga gtgtatctt attacaacg // >BADN01034111.1.pep GLGLDLPVM // >BADN01034111.1.[2206:2178].sp GGACTTGGTTTAGACCTACCAGTCATG // BADN01034111.1 GeneWise match 2206 2180 14.02 - . BADN01034111.1-genewise-prediction-1 BADN01034111.1 GeneWise cds 2206 2180 0.00 - 0 BADN01034111.1-genewise-prediction-1 //