genewise output Score 168.45 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000114_2.0 85 FLQEANVTLIVIGQSSYHHIE PFCKL FLQ++ ++L+VIGQS++HHIE PFC L FLQDSGISLVVIGQSAHHHIE PFCSL BADN01089330.1 542 ttcgtgaatggagctgcccagGTACTGT Intron 1 TAGctttc ttaacgtgttttgaccaaata<0-----[605 : 696]-0>ctgct tggttctcgtgttgtttttag accgg SPP00000114_2.0 111 TGYSHEIYVDPEREIYKRLGMKRGEEIASS TGY HEI+VDPER IY++LGMKR E++ S TGYPHEIFVDPERCIYQKLGMKREEKFTDS BADN01089330.1 712 agtccgatggcgatatcacgaaaggatagt cgacaatttacaggtaaatgtagaaatcac ggtttaatgcgggcttagtggaaagataca SPP00000114_2.0 141 GQSPHIKSNLLSGSLQSLWRAVT SPH+KS + G ++S+WRA+T -:A[gcc] HPSPHVKSGVFMGQMKSIWRAMT BADN01089330.1 802 GGTAACGC Intron 2 AAGCCccaccgatggtagcaaaatagaa <1-----[803 : 895]-1> acgcatacgtttgatagtggctc catatggttctgcaggtaggcgt SPP00000114_2.0 164 GPLFDFQGDPAQQGGTLILGP NN P FDFQGD QQGG +I GP + SPAFDFQGDLHQQGGAIIAGP G:G[ggc] SR BADN01089330.1 967 acgtgtcggccccgggaaggcGGTGAGCC Intron 3 CAGGCtc gcctatagataaaggcttcgc <1-----[1031 : 1126]-1> cg ttacccgttgtgatacctaaa ta SPP00000114_2.0 188 IHFIHRDRNRLDHKPINSVLQLVGVQH-VNFTNRPSVIHV +HF H D NRLDH PIN +LQL GVQ +F+++P +IHV VHFSHFDMNRLDHMPINWLLQLAGVQQTLDFSDKPKIIHV BADN01089330.1 1135 gcttctgaaccgcacaatccccgggccacgtagacaaacg tatcatatagtaatctagttatcgtaactatgaacattat cttatccgccgccgcttgcggccatagtgccttgagcctg // Making a A in phase 1 intron Making a G in phase 1 intron >BADN01089330.1.pep FLQDSGISLVVIGQSAHHHIEPFCSLTGYPHEIFVDPERCIYQKLGMKREEKFTDSAHPS PHVKSGVFMGQMKSIWRAMTSPAFDFQGDLHQQGGAIIAGPGSRVHFSHFDMNRLDHMPI NWLLQLAGVQQTLDFSDKPKIIHV // >BADN01089330.1.[542:1254].sp TTTTTGCAGGATTCTGGCATTAGCTTGGTTGTGATTGGTCAGTCTGCTCATCATCATATA GAGCCATTCTGCTCGCTGACGGGGTATCCTCATGAAATATTTGTGGACCCGGAGAGGTGC ATTTATCAAAAGCTTGGGATGAAAAGAGAAGAGAAATTTACAGACTCAGCCCACCCAAGT CCACATGTGAAGTCTGGTGTCTTTATGGGCCAAATGAAGAGTATATGGAGGGCCATGACT AGTCCTGCATTCGACTTCCAGGGTGATCTGCATCAGCAAGGTGGAGCCATCATTGCAGGA CCAGGCTCTCGAGTCCATTTTTCACATTTCGACATGAACCGCCTGGACCACATGCCCATT AATTGGCTCCTGCAGCTCGCCGGAGTTCAACAGACTCTGGACTTCAGTGATAAGCCAAAG ATCATCCATGTG // BADN01089330.1 GeneWise match 542 1254 168.45 + . BADN01089330.1-genewise-prediction-1 BADN01089330.1 GeneWise cds 542 604 0.00 + 0 BADN01089330.1-genewise-prediction-1 BADN01089330.1 GeneWise intron 605 696 0.00 + . BADN01089330.1-genewise-prediction-1 BADN01089330.1 GeneWise cds 697 802 0.00 + 0 BADN01089330.1-genewise-prediction-1 BADN01089330.1 GeneWise intron 803 895 0.00 + . BADN01089330.1-genewise-prediction-1 BADN01089330.1 GeneWise cds 896 1030 0.00 + 2 BADN01089330.1-genewise-prediction-1 BADN01089330.1 GeneWise intron 1031 1126 0.00 + . BADN01089330.1-genewise-prediction-1 BADN01089330.1 GeneWise cds 1127 1254 0.00 + 2 BADN01089330.1-genewise-prediction-1 // genewise output Score 15.34 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000114_2.0 168 DFQGDPAQQGGTL D+ D + GGTL DYDSDVGRSGGTL BADN01089330.1 -1320 gtgagggcaggac aaagatgggggct ttcttggacacag // >BADN01089330.1.pep DYDSDVGRSGGTL // >BADN01089330.1.[1320:1280].sp GATTATGACAGTGATGTGGGGCGAAGCGGAGGCACACTG // BADN01089330.1 GeneWise match 1320 1282 15.34 - . BADN01089330.1-genewise-prediction-1 BADN01089330.1 GeneWise cds 1320 1282 0.00 - 0 BADN01089330.1-genewise-prediction-1 //