genewise output Score 19.29 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000074_2.0 154 FVLYLLLWVVL---FSFILSHWEKYNTGILFLPWGYD F+L+ LL V + ++S +K + G++F P G D FILFHLLICVCPHHLTDVVSPRQKQDAGVIFFPVGQD BADN01047755.1 872 tattcctatgtccctagggtcacacggggattcggcg ttttatttgtgcaatcattccgaaaacgttttctgaa ccatttaccgttccgttcacaggaatcttatcagagt // >BADN01047755.1.pep FILFHLLICVCPHHLTDVVSPRQKQDAGVIFFPVGQD // >BADN01047755.1.[872:982].sp TTCATCTTATTTCATCTTTTAATCTGCGTGTGTCCTCACCACTTGACTGATGTCGTATCC CCAAGGCAGAAACAAGATGCCGGTGTTATATTTTTCCCAGTGGGACAGGAT // BADN01047755.1 GeneWise match 872 982 21.29 + . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 872 982 0.00 + 0 BADN01047755.1-genewise-prediction-1 // genewise output Score 555.06 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000074_2.0 1 MAGYEYVSPEQLAGFDKYK YSAVDTN MA YEYV+ +QLAGFDKYK YSAVD+N MALYEYVTQDQLAGFDKYK YSAVDSN BADN01047755.1 -7887 agctgtgacgccggtgataGTAATAG Intron 1 CAGtagggta tctaaatcaaatcgtaaaa<0-----[7830 : 4619]-0>agctaca gtttatctgcgcgcccacg ccagcgc SPP00000074_2.0 27 PLSLYVMHPFWNTIVK VFPTWLAPNL PLS+YVMHPFWN +VK +PTWLAPNL PLSVYVMHPFWNFVVK FLPTWLAPNL BADN01047755.1 -4597 cctgtgaccttatggaGTGAGAA Intron 2 CAGtccatcgcac ctctattactgattta<0-----[4549 : 4009]-0>ttccgtccat cgtcccgctcgctggg tagaggtatc SPP00000074_2.0 53 ITFSGFLLVVFNFLLMAYFDPDFYAS ITF+GF+ +V+NFL++A++D DF AS ITFTGFMFLVLNFLMLAFYDFDFNAS A:A[gct] BADN01047755.1 -3978 aatagtatcgtatcatgttgtgtagtGGTATGTC Intron 3 tctcgttttttattttctaatatacc <1-----[3899 : 3077] cacactgctgacctggctccttctca SPP00000074_2.0 79 PGHKHVPDWVWIVVGILNFVAYTL GH+HVP WVW+ GI NF+AYTL AGHEHVPSWVWVAAGIFNFLAYTL BADN01047755.1 -3079 CAGCTggcgcgcatgtggggatattgtac -1> cgaaatcggtgtccgttattcact aatacgttgcgttagtcccgctac SPP00000074_2.0 104 GVDGKQARRTNSSTPLGELFDHG GVDGKQARRTNSSTPLGELFDHG D:D[gac] GVDGKQARRTNSSTPLGELFDHG BADN01047755.1 -3002 GGTGAGTT Intron 4 TAGACggggacgccaattaccggctgcg <1-----[3001 : 1174]-1> gtagaacggcacccctgattaag ttttagagcccccgaagggtccg SPP00000074_2.0 128 LDSWSCVYFVVTVYSIFGRGSTGVSVFVLYLLLWVVLFSFILSHWEKYN LDSW+C++FV TVYSIFGRG +GV V LY +LWVVLFSFILSHWEKYN LDSWACIFFVATVYSIFGRGESGVGVATLYYILWVVLFSFILSHWEKYN BADN01047755.1 -1102 cgatgtattggagttatgcggagggggacttactggctttactctgata taggcgttttcctacttgggaggtgtcctaattgttttctttcagaaaa gccgctcctgcccccatgccgccgtgcggtcccgggtccccgccgaatc SPP00000074_2.0 177 TGILFLPWGYDISQV TISFVYIVTAV TGILFLPWGYDISQV TIS+VY+VTAV TGILFLPWGYDISQV TISLVYLVTAV BADN01047755.1 -955 agattcctgtgaacgGTGAGGA Intron 5 CAGaatcgttgagg cgttttcggaatgat<0-----[910 : 816]-0>ctcttattcct cccgtgtgaccctag cccttcgcttg SPP00000074_2.0 203 VGVEAWYEPFLFNFLYRDLFTAMII VGVE WY+P L++FLYRDLFT MII VGVETWYQPVLLHFLYRDLFTFMII G:A[gcc] BADN01047755.1 -782 ggggattccgctctctagctataaaGGTGAGCT Intron 6 tgtacgaactttattagattctttt <1-----[706 : 627] ccgaggcgggggccttactcccgcc SPP00000074_2.0 228 CALCVTLPMSLLNFF SYK C+ VTLPMSL N + +++ CSFTVTLPMSLYNVL R:K[aag] AHR BADN01047755.1 -629 CAGCCtttagatcaactagcAAGTAAGTC Intron 7 CAGGgcc -1> gctctctctgtaatt <2-----[577 : 487]-2> cag tcctgcacgcccccg tcc SPP00000074_2.0 248 NNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPSDILELHPRVFYFMV +NTLK +S+YEA++P +SP LLF+LST W+++SPS+ILEL PR+FY+MV SNTLKHSSLYEAFLPFLSPVLLFVLSTIWVVYSPSNILELQPRIFYLMV BADN01047755.1 -476 aaacacaattggtcctctcgcctgttaatggttctaacgcccaattcag gactaaggtaacttcttccttttttcctgttacccattatacgttattt tctgacccgcaccgtcttcccttcgcctggtctatcccgggcgccccgg SPP00000074_2.0 297 GTAFANST CQLIVCQMSSTRCPTLNW GTAFAN T C+LIVCQMS+TRC L+W GTAFANVT CKLIVCQMSNTRCQPLSW BADN01047755.1 -329 gagtgagaGTGAGTC Intron 8 CAGtacagtcaaaactcccat gcctcatc<0-----[305 : 189]-0>gatttgatgacggactgg gacctccg tggtgcggtcatcgggcg SPP00000074_2.0 323 LLVPLFLVVLVVNLGVASYVESILLYTLTTAFTLAHIHYGVRVVK LL+P+ VVL+ GV + E++LLY T A LAHIHYGV VV+ LLLPMTPVVLLAVTGVVAN-ETLLLYLWTAAVILAHIHYGVSVVR BADN01047755.1 -134 ctccaacggttggagggga gactctctagggacgcactggtgga tttctccttttctcgttca actttatgccctttcataagtcttg gggtgaggggatgtggccc gaaggtggactcaagcacccaagaa // Making a A in phase 1 intron Making a D in phase 1 intron Making a A in phase 1 intron Making a K in phase 2 intron >BADN01047755.1.pep MALYEYVTQDQLAGFDKYKYSAVDSNPLSVYVMHPFWNFVVKFLPTWLAPNLITFTGFMF LVLNFLMLAFYDFDFNASAAGHEHVPSWVWVAAGIFNFLAYTLDGVDGKQARRTNSSTPL GELFDHGLDSWACIFFVATVYSIFGRGESGVGVATLYYILWVVLFSFILSHWEKYNTGIL FLPWGYDISQVTISLVYLVTAVVGVETWYQPVLLHFLYRDLFTFMIIACSFTVTLPMSLY NVLKAHRSNTLKHSSLYEAFLPFLSPVLLFVLSTIWVVYSPSNILELQPRIFYLMVGTAF ANVTCKLIVCQMSNTRCQPLSWLLLPMTPVVLLAVTGVVANETLLLYLWTAAVILAHIHY GVSVVR // >BADN01047755.1.[7887:1].sp ATGGCTCTTTATGAATATGTCACTCAGGACCAGCTCGCGGGCTTCGACAAATACAAGTAC AGCGCAGTGGACTCGAACCCCCTGTCTGTCTACGTCATGCACCCTTTCTGGAACTTTGTG GTGAAGTTTCTACCGACATGGCTGGCTCCAAATCTCATCACATTCACAGGCTTTATGTTC CTTGTGTTAAACTTCCTTATGTTGGCCTTTTACGACTTTGATTTCAATGCCTCAGCTGCA GGACATGAACACGTGCCTAGTTGGGTCTGGGTTGCTGCAGGGATTTTCAACTTCTTGGCC TATACACTCGACGGTGTTGATGGTAAACAGGCACGGCGCACCAACTCCTCCACGCCACTA GGGGAGCTGTTTGACCACGGGCTGGACAGCTGGGCCTGTATCTTCTTTGTGGCCACCGTC TACTCCATATTTGGGCGCGGCGAGAGCGGCGTGGGTGTGGCCACGCTGTATTACATCCTC TGGGTGGTGCTTTTCTCCTTCATCCTGTCCCACTGGGAAAAATATAACACCGGCATCTTG TTTCTGCCTTGGGGATACGACATCAGTCAAGTGACCATCTCCCTTGTTTACTTGGTCACT GCTGTGGTCGGCGTGGAAACGTGGTACCAGCCGGTGCTGTTGCACTTCCTTTATAGAGAC CTTTTCACCTTCATGATCATCGCCTGTTCCTTCACTGTGACCTTACCCATGAGCCTCTAC AACGTCCTGAAGGCTCACCGCAGTAACACTCTGAAACACAGCAGCTTGTACGAAGCCTTC CTGCCTTTCCTTTCTCCCGTCCTCCTTTTTGTCTTGTCCACCATTTGGGTGGTTTACTCT CCATCTAACATCCTCGAGCTGCAGCCCAGGATCTTCTACCTCATGGTGGGGACAGCCTTC GCTAACGTCACGTGTAAGCTGATTGTGTGCCAGATGAGTAACACACGTTGCCAGCCGCTG AGCTGGCTGTTGCTGCCTATGACACCGGTGGTGTTGTTAGCTGTGACTGGGGTGGTCGCC AACGAGACACTATTGCTGTATCTGTGGACAGCCGCTGTCATACTAGCGCACATACACTAC GGCGTATCAGTGGTAAGA // BADN01047755.1 GeneWise match 7887 3 555.06 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 7887 7831 0.00 - 0 BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise intron 7830 4619 0.00 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 4618 4550 0.00 - 0 BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise intron 4549 4009 0.00 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 4008 3900 0.00 - 0 BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise intron 3899 3077 0.00 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 3076 3002 0.00 - 2 BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise intron 3001 1174 0.00 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 1173 911 0.00 - 2 BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise intron 910 816 0.00 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 815 707 0.00 - 0 BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise intron 706 627 0.00 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 626 578 0.00 - 2 BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise intron 577 487 0.00 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 486 306 0.00 - 1 BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise intron 305 189 0.00 - . BADN01047755.1-genewise-prediction-1 BADN01047755.1 GeneWise cds 188 3 0.00 - 0 BADN01047755.1-genewise-prediction-1 //