genewise output Score 298.07 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000054_2.0 500 QMKTPHNPLDSSAPLMKKGKQREIPKAKKPTSLKK Q K HNPLDS++PL+KKGKQRE+PKAKKPT LKK QDKIAHNPLDSTSPLVKKGKQREVPKAKKPTPLKK BADN01086679.1 1120 cgaagcaccgtaactgaagacaggcagaacaccaa aaatcaactaccgcttaagaagatcacaaccctaa gtattctcgcccctgggacggaggcacgacctcgg SPP00000054_2.0 535 IILKERQERKQR--LQENAVSPAFTS +ILKER+ERKQR L+E + P S VILKEREERKQRRLLEERGLLPEDES BADN01086679.1 1225 GTAAGTT Intron 1 CAGgatagaggaacactcggagcccgggt <0-----[1225 : 1334]-0>tttaagaagaaggttaaggttcaaac ctgaaggggagatggggacggtatgc SPP00000054_2.0 559 DDTQDG---ESGGDDQF EQAELS D E G + EQ + KPANDAIEEEQCGANLT P:E[gag] EQTTSA BADN01086679.1 1413 acgaggagggctggacaGGTCAGAG Intron 2 TAGAGgcaatg accaactaaaaggcatc <1-----[1465 : 1699]-1> aacccc atattcaaaggtcatca aaccat SPP00000054_2.0 580 GPEGMDELISTPSVEDKSEEPPGTELQRDTEASHLAPNHTTFPKIHSRR P ST + S P T ++ T A P T PKIHSR+ VP------CSTVEEQTTSAVPCATVEEQTTSA---VPCSTNRPKIHSRK BADN01086679.1 1720 gc ttagggcaatggctgagggcaatg gcttaaccaacaaa tc gcctaaacccctcgcctaaacccc tcgccagcatagga ga cctagaaccatgacctagaaccat gaccctacacccag SPP00000054_2.0 629 FR YCSQMLSKEVDACVTDLLKEL FR YCSQMLSK+VD CVT LLKEL FR D:D[gac] YCSQMLSKDVDECVTSLLKEL BADN01086679.1 1840 taGAGTAAGAT Intron 3 CAGCttacacaaggggtgatccagc tg <2-----[1848 : 1977]-2> aggattgaataagtccttaat ca tccgggcacgtgtggtgaggg SPP00000054_2.0 653 VRFQDRMYQKDPVKAKTKRRLVLGLREVLKHLKLKKLKCVIISPNCEKI VRFQDR+YQKDP+KA+ KRRLV+GLREVLKHLKL+K+KCVIISPNCE+I VRFQDRLYQKDPMKARMKRRLVMGLREVLKHLKLRKVKCVIISPNCERI BADN01086679.1 2042 gctcgcctcagcaagcaaaccgagccggcaccacaagatgaatcatgca tgtaagtaaaactacgtaggtttgtgattaatatgatagtttccagagt ttcgccccggccggcaggagtggctagctgccacggcgccccatctgcc SPP00000054_2.0 702 QSK GLDDTLHTIIDYACEQNIPF QSK GLD+ LHTIID EQ +PF QSK G:G[gga] GLDEALHTIIDTCREQGVPF BADN01086679.1 2189 ctaGGTACAGA Intron 4 CAGGAgcgggccaaagatcgcggct aca <1-----[2199 : 2426]-1> gtaactacttacggaagtct gca cgtgttccccctttagggac SPP00000054_2.0 726 VFALNRKALGRSLNKAVPVSVVGIFSYDGAQ VFAL+RKALGR +NKAVPVS+VGIF+YDGAQ VFALSRKALGRCVNKAVPVSLVGIFNYDGAQ BADN01086679.1 2489 gtgctcagtgctgaaggcgacggatatgggc ttctcgactgggtaactctgttgttaaagca cctcagatgtccccgggtccggccccttcag SPP00000054_2.0 757 DQFHKMVELTVAARQAYKTMLENVQQ D +HKM+EL+ AR+AY+ M+ +++Q DYYHKMIELSSEARKAYEVMVSSLEQ BADN01086679.1 2582 GTCAGCT Intron 5 CAGgttcaaagtttggaagtggagtacgc <0-----[2582 : 2710]-0>aaaaattatccacgacaatttcgtaa ccttggtgggtgcgaccgggggtggg // Making a E in phase 1 intron Making a D in phase 2 intron Making a G in phase 1 intron >BADN01086679.1.pep QDKIAHNPLDSTSPLVKKGKQREVPKAKKPTPLKKVILKEREERKQRRLLEERGLLPEDE SKPANDAIEEEQCGANLTEEQTTSAVPCSTVEEQTTSAVPCATVEEQTTSAVPCSTNRPK IHSRKFRDYCSQMLSKDVDECVTSLLKELVRFQDRLYQKDPMKARMKRRLVMGLREVLKH LKLRKVKCVIISPNCERIQSKGGLDEALHTIIDTCREQGVPFVFALSRKALGRCVNKAVP VSLVGIFNYDGAQDYYHKMIELSSEARKAYEVMVSSLEQ // >BADN01086679.1.[1120:2788].sp CAGGATAAAATTGCTCACAATCCCCTGGACTCCACCAGCCCTTTGGTGAAGAAAGGCAAG CAGAGAGAGGTGCCCAAAGCCAAGAAACCCACCCCTCTCAAGAAGGTCATTTTGAAAGAA AGGGAGGAGAGGAAACAGAGACGTTTGCTGGAGGAGAGAGGCCTGCTGCCTGAAGATGAG TCCAAACCTGCAAATGATGCCATAGAAGAAGAGCAGTGTGGCGCAAATCTCACAGAGGAA CAAACCACCTCAGCTGTGCCATGCTCCACTGTAGAGGAACAAACCACCTCAGCTGTGCCA TGCGCCACTGTAGAGGAACAAACCACCTCAGCTGTGCCATGCTCCACCAATCGACCCAAA ATCCACAGCAGAAAGTTCAGAGACTATTGCAGCCAGATGCTGAGCAAAGACGTGGATGAG TGTGTGACGTCTCTGCTAAAGGAGCTGGTTCGTTTCCAGGACCGCCTCTACCAGAAGGAC CCCATGAAGGCCCGAATGAAGAGACGGCTTGTGATGGGCCTTCGAGAGGTCCTTAAGCAC CTCAAACTCAGGAAGGTCAAGTGCGTCATCATCTCACCTAACTGTGAGCGCATCCAGTCC AAAGGAGGCCTGGATGAGGCTCTTCACACCATCATCGACACTTGTCGTGAACAGGGGGTG CCATTCGTCTTCGCTCTCTCACGGAAAGCTTTGGGTCGCTGCGTCAACAAGGCGGTGCCT GTCAGCCTGGTGGGCATCTTCAACTATGATGGCGCACAGGACTACTATCATAAGATGATT GAGTTGTCGTCTGAGGCCAGGAAAGCCTACGAGGTGATGGTGTCGAGTCTGGAGCAG // BADN01086679.1 GeneWise match 1120 2788 308.05 + . BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise cds 1120 1224 0.00 + 0 BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise intron 1225 1334 0.00 + . BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise cds 1335 1464 0.00 + 0 BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise intron 1465 1699 0.00 + . BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise cds 1700 1847 0.00 + 2 BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise intron 1848 1977 0.00 + . BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise cds 1978 2198 0.00 + 1 BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise intron 2199 2426 0.00 + . BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise cds 2427 2581 0.00 + 2 BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise intron 2582 2710 0.00 + . BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise cds 2711 2788 0.00 + 0 BADN01086679.1-genewise-prediction-1 // genewise output Score 17.42 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000054_2.0 101 QNVYSVPGSQYLYNQ QN+YS PG ++ Q QNIYSRPGFDTVHRQ BADN01086679.1 -1039 caattacgtgagccc aatacgcgtactaga actttatcttcgcga // >BADN01086679.1.pep QNIYSRPGFDTVHRQ // >BADN01086679.1.[1039:993].sp CAAAACATTTATTCTAGACCTGGCTTTGATACCGTGCACCGGCAA // BADN01086679.1 GeneWise match 1039 995 17.42 - . BADN01086679.1-genewise-prediction-1 BADN01086679.1 GeneWise cds 1039 995 0.00 - 0 BADN01086679.1-genewise-prediction-1 //