genewise output Score 205.09 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info sp|Q503H1|TSAP1 9 LEPYMDEDFICRAFAQMGETVVKIRLIRDKIT LE YMDE FI RAF+ MGE VV +R+IR+K+T LEAYMDEKFITRAFSTMGEQVVNVRIIRNKMT BADN01022579.1 11463 cggtaggataaagttaaggcggagcaacaaaa tacataaattcgctcctgaattatgttgaatc gggcgtggtctactccgggggctggcaccgga sp|Q503H1|TSAP1 41 KNAGYGFVELADDTAVERCLRKV GY FVE+ D+ ERCLRK+ G:G[ggg] GALGYCFVEMTDEATAERCLRKI BADN01022579.1 11559 GGGTGAGTA Intron 1 CAGGggcgtttggaagggaggatccaa <2-----[11561:11637]-2> gctgagttatcaacccaggtgat ttgtttcgggatgcatggttcac sp|Q503H1|TSAP1 65 NGKPLPGATP PKRFKLSRSNYGKQGE NGK LPGA P P RFKL+R+ +GKQ NGKALPGANP PTRFKLNRATFGKQDS BADN01022579.1 11708 agagtcggacGTATGAA Intron 2 CAGcaatatacgatgacga agactcgcac<0-----[11738:11835]-0>ccgtatagcctgaaag taaaaaacta caacgacacctgaacc sp|Q503H1|TSAP1 91 STFSLFVSDLTPDVDDGMLYEFF +SLFV DLTP+VDDGMLYEFF S:G[ggt] QMYSLFVGDLTPEVDDGMLYEFF BADN01022579.1 11884 GGGTGAGTC Intron 3 TAGTcattctgggcacgggggactgtt <2-----[11886:12006]-2> atactttgatccataagttaatt ggttgtgatataggttggttgcc sp|Q503H1|TSAP1 115 HYHFSSCCSGKIVLDANGHS CCG + + SC GK+VLD+ G+S CG YNRYPSCRGGKVVLDSMGNS K:K[aag] GCG BADN01022579.1 12077 tactcttcggaggcgaagatAAGTGAGTG Intron 4 CAGGgtg aagaccggggatttagtgac <2-----[12139:12276]-2> ggg cccctccttaaaggccgccc ccc sp|Q503H1|TSAP1 139 FVSFESEREQKRALVDLQGATGLGKKALRLSLASSRVN FV F ER QKRAL + QGA GLG K LRLSLA+ N FVQFPDERLQKRALEECQGAVGLGAKPLRLSLAA---N BADN01022579.1 12287 tgctcggcccacgtggtcggggcggaccacacgg a ttatcaagtaagctaagagctgtgcactgtgtcc a ttgcacggtgggggggtgttaagttatgagcgtt c sp|Q503H1|TSAP1 177 KKESSENQIWQYHSDSKNASFIN +++ SE + WQ S S + K:K[aaa] QQQQSEQKSWQ--SSSGYRPSYD BADN01022579.1 12392 AAGTGAGTC Intron 5 CAGAcccctgcattc tatgtacatg <2-----[12394:12493]-2> aaaacaaacga cgcgagcgaa ggggagagggg cctacacttc sp|Q503H1|TSAP1 201 QYYYPQNLSYLSTY-DWNYSLDYLNPSQNTTPVDVTQSEQTEDDDLE QY Q +Y Y W Y N D TQ + QYNQYQQQAYPGYYPSWGYDQTGAGYGYNYQQYDYTQYPPPQVSS-Q BADN01022579.1 12558 ctactcccgtcgttcttgtgcagggtgtatcctgtactccccgaa c aaaaaaaacacgaaccggaaacgcgagaaaaaaaacaacccatgg a gccgcgggcttctctcgcccgtaagcccctggttcagtcgagacc g sp|Q503H1|TSAP1 247 PDSEINVTEANETFMAQSEELYS P E++V EAN FM SEELY Y:Y[tat] PSPELDVVEANRKFMELSEELYD BADN01022579.1 12696 TGTTTATC Intron 6 CAGATcacgcgggggaaatagcaggttg <1-----[12697:14195]-1> cgcatattacagattatgaataa ccaggtggaccggcggctaagcc sp|Q503H1|TSAP1 271 ALIGCFFQPPESWDGVTCSASSYLPEPI ALI C +QP E C S+ LPEPI ALIECHWQPAEFSTEQECMTSN-LPEPI BADN01022579.1 14267 gcagtctccggttagcgtaata ccgca cttagagaccatccaaagtcca tcact tgcgttggaagccaaggtgaac aaatt // Making a G in phase 2 intron Making a G in phase 2 intron Making a K in phase 2 intron Making a K in phase 2 intron Making a Y in phase 1 intron >BADN01022579.1.pep LEAYMDEKFITRAFSTMGEQVVNVRIIRNKMTGGALGYCFVEMTDEATAERCLRKINGKA LPGANPPTRFKLNRATFGKQDSGQMYSLFVGDLTPEVDDGMLYEFFYNRYPSCRGGKVVL DSMGNSKGCGFVQFPDERLQKRALEECQGAVGLGAKPLRLSLAANKQQQQSEQKSWQSSS GYRPSYDQYNQYQQQAYPGYYPSWGYDQTGAGYGYNYQQYDYTQYPPPQVSSQYPSPELD VVEANRKFMELSEELYDALIECHWQPAEFSTEQECMTSNLPEPI // >BADN01022579.1.[11463:14347].sp CTGGAGGCGTACATGGATGAGAAGTTTATCACTAGAGCCTTTTCCACCATGGGGGAGCAG GTGGTCAATGTGCGGATCATACGCAACAAGATGACAGGGGGTGCTCTGGGTTATTGTTTC GTGGAGATGACAGATGAGGCCACAGCTGAGAGGTGTCTTCGCAAAATCAATGGAAAAGCA TTACCAGGAGCCAATCCACCCACAAGATTCAAGTTAAACCGAGCCACCTTTGGGAAACAA GACAGCGGTCAGATGTATTCTCTGTTTGTGGGAGATCTAACTCCAGAGGTGGATGATGGG ATGCTTTATGAGTTCTTCTACAACCGCTACCCTTCCTGCCGTGGTGGAAAAGTAGTGCTG GACAGCATGGGCAACTCCAAGGGCTGCGGCTTTGTTCAGTTCCCAGACGAGCGGCTTCAG AAGCGGGCGTTGGAGGAGTGTCAGGGTGCTGTAGGACTGGGTGCTAAACCTCTGAGACTG AGCCTGGCTGCTAACAAACAGCAGCAGCAGTCAGAGCAAAAGTCGTGGCAGTCCAGCTCT GGATACAGACCCAGTTATGACCAGTACAACCAGTACCAGCAGCAGGCCTATCCTGGCTAT TACCCTTCCTGGGGCTACGACCAGACTGGAGCAGGGTACGGCTACAACTATCAGCAGTAT GATTACACACAGTATCCCCCGCCACAGGTAAGCAGCCAGTATCCCAGCCCAGAGCTGGAT GTGGTGGAAGCCAACAGGAAGTTCATGGAGCTCAGTGAAGAATTGTACGACGCTCTGATC GAGTGTCATTGGCAGCCAGCAGAGTTCTCCACAGAACAGGAGTGTATGACATCAAACCTA CCAGAACCTATT // BADN01022579.1 GeneWise match 11463 14347 208.08 + . BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise cds 11463 11560 0.00 + 0 BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise intron 11561 11637 0.00 + . BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise cds 11638 11737 0.00 + 1 BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise intron 11738 11835 0.00 + . BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise cds 11836 11885 0.00 + 0 BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise intron 11886 12006 0.00 + . BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise cds 12007 12138 0.00 + 1 BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise intron 12139 12276 0.00 + . BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise cds 12277 12393 0.00 + 1 BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise intron 12394 12493 0.00 + . BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise cds 12494 12696 0.00 + 1 BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise intron 12697 14195 0.00 + . BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise cds 14196 14347 0.00 + 2 BADN01022579.1-genewise-prediction-1 // genewise output Score 18.92 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info sp|Q503H1|TSAP1 113 FFHYHFSSCCS +F+Y++ CCS YFYYYYCYCCS BADN01022579.1 -426 ttttttttttt ataaaagaggc tctttttttta // >BADN01022579.1.pep YFYYYYCYCCS // >BADN01022579.1.[426:392].sp TATTTCTATTATTATTATTGTTATTGTTGTTCA // BADN01022579.1 GeneWise match 426 394 18.92 - . BADN01022579.1-genewise-prediction-1 BADN01022579.1 GeneWise cds 426 394 0.00 - 0 BADN01022579.1-genewise-prediction-1 //