genewise output Score 16.00 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info tr|Q7T2C8|Q7T2C 455 LLARRLYAGATMKCD LL R++ G+T+K D LLILRIHGGSTLKPD BADN01025334.1 6455 ctacaacggaatacg ttttgtagggctaca tgagaattgctaatc // >BADN01025334.1.pep LLILRIHGGSTLKPD // >BADN01025334.1.[6455:6499].sp CTTTTGATACTGAGAATACATGGTGGGAGCACTTTAAAACCTGAC // BADN01025334.1 GeneWise match 6455 6499 16.00 + . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 6455 6499 0.00 + 0 BADN01025334.1-genewise-prediction-1 // genewise output Score 821.33 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info tr|Q7T2C8|Q7T2C 1 MPPIENDAGREQIRSKIKELIDSSAVVVFSKSFCPFCVK MPPIEND G+ +++S+I++LIDS+ V+VFSKS+CPFCVK MPPIENDTGKNELKSRIQQLIDSNQVIVFSKSYCPFCVK BADN01025334.1 -9929 accagagagaagcatcacccagtacgagtaaattcttga tcctaaacgaaatacgtaattacaattttgagagctgta gtccatcccgtacgcgaggttcctagcgctacctgttag tr|Q7T2C8|Q7T2C 40 VKDLFKELNVKYNTIELDLM VKDLFKEL V+ N +ELDL+ VKDLFKELKVECNVVELDLL BADN01025334.1 -9812 GTAAGGT Intron 1 TAGgagctagcaggtagggtgcc <0-----[9812 : 9141]-0>taattaatatagattatatt gacgcaggacgtcggggtga tr|Q7T2C8|Q7T2C 60 DGTNYQDLLHEMTGQKTVPNVFI DGTNYQ++L EMTGQKTVPNVFI E:E[gag] DGTNYQEMLLEMTGQKTVPNVFI BADN01025334.1 -9080 GGTAAAAG Intron 2 CAGAGggaatcgaccgaagcaagcagta <1-----[9079 : 7614]-1> agcaaaatttatcgaactcattt tacccgagggggaggactccccc tr|Q7T2C8|Q7T2C 84 NKKHIGGCDNTMK AHKDGVLQKLLGE NK H+GGCD TM+ AHKDG LQ+LLG NKTHLGGCDKTMQ AHKDGSLQQLLGG BADN01025334.1 -7542 aaaccggtgaaacGTAAGGA Intron 3 CAGgcaggacccccgg aacatgggaacta<0-----[7503 : 6095]-0>caaaggtaattgg cggccccctacgg ctacccgggagca tr|Q7T2C8|Q7T2C 110 GSEVYDYDLIVIGGGSGGLACSK EAA +E YDYDLIVIGGGSGGLACSK EAA ENEAYDYDLIVIGGGSGGLACSK EAA BADN01025334.1 -6055 gaggtgtgcagagggtggcgttaGTGACAG Intron 4 TAGggg aaacaaaattttgggcggtcgca<0-----[5986 : 4740]-0>acc acacccccctccaaatatgccag act tr|Q7T2C8|Q7T2C 136 TLGKKVMVLDYVVPTPQGTAW LG LGKKVMVLD+VVPTP+GT+W LG MLGKKVMVLDFVVPTPKGTSW G:G[ggt] LG BADN01025334.1 -4730 atgaagagcgtggcacagaatGGTAAGAT Intron 5 CAGGTcg ttgaattttatttcccagcgg <1-----[4666 : 4539]-1> tg gggggcgtgctttgaaaaccg gc tr|Q7T2C8|Q7T2C 160 GTCVNVGCIPKKLMHQTALLGTAMEDARKFGWEFAEQ GTCVNVGCIPKKLMHQTALLGTA++DARKFGWEF E GTCVNVGCIPKKLMHQTALLGTALQDARKFGWEFDET BADN01025334.1 -4530 gatgaggtacaacaccagccgagtcggcatgtgtgga gcgtatggtcaattaaccttgcctaacgatggataac aacgcccctcagggcggccgcgcggcccgccggccga tr|Q7T2C8|Q7T2C 197 THNWETMKTAVNNYIGSLNWGYR HNWETMKTAVNNYIGSLNWGYR V:V[gtg] KHNWETMKTAVNNYIGSLNWGYR BADN01025334.1 -4419 GGTGAGGG Intron 6 CAGTGacatgaaaaggaatagttatgta <1-----[4418 : 4275]-1> aaagactacctaaatgctaggag accgggggaggcccccggcgccg tr|Q7T2C8|Q7T2C 221 VSLRDKNVNYVNAYAEFVEPHKIK AT V+LRDKNVNYVNAYAEF+EPHKIK AT VALRDKNVNYVNAYAEFIEPHKIK AT BADN01025334.1 -4203 ggcagaagatgagtggtagccaaaGTAACTG Intron 7 CAGga tctgaaataatacacattacaata<0-----[4131 : 3758]-0>cc cggacgtcctccctagctaacacg aa tr|Q7T2C8|Q7T2C 247 NKRGKETFYTAAQFVLATGERPRYLGIPGDKEFCIT NKRGKETFYTAA+FVLATGERPRYLGIPGDKE+CIT NKRGKETFYTAAKFVLATGERPRYLGIPGDKEYCIT BADN01025334.1 -3751 aacgagattaggatgtgaggacctcgacggagttaa aaggaactacccatttccgagcgatgtcgaaaagtc caagggatcagtgtcacacgggccgcctacggtccc tr|Q7T2C8|Q7T2C 283 DDLFSLPYCPGKTLVVGASYVAL DDLFSL YCPGKTLV+GASYVAL S:S[agc] DDLFSLSYCPGKTLVIGASYVAL BADN01025334.1 -3643 AGGTGAGAG Intron 8 CAGCggcttctttcgaacgaggttggc <2-----[3641 : 3197]-2> aattctcagcgactttgccatct ccgcagtccgagcggcggtcgtg tr|Q7T2C8|Q7T2C 307 ECGGFLAGLGLDVTIMVRSILLRGFDQDMADRAGEYMETHGVKFLRKFV ECGGFLAGLGLDVT+MVRSILLRGFDQDMA+RAGE+ME HGVKFLRKF+ ECGGFLAGLGLDVTVMVRSILLRGFDQDMANRAGEHMEEHGVKFLRKFI BADN01025334.1 -3126 gtggtcggcgcggagagctaccagtgcgagacgggcaggcggatccata agggttcgtgtatctttgctttggtaaatcagcgaataaagtattgatt gcgccgccgtccctcgctctgggcccgcgcctcggcgggcgcgcccacc tr|Q7T2C8|Q7T2C 356 PTK IEQLEAGTPGRIKVTAKSTESEE P K IE+LEAGTPG++KVTAKSTE++E PVK IEELEAGTPGKLKVTAKSTETDE BADN01025334.1 -2979 cgaGTTAGTG Intron 9 CAGaggcgggacgacagagatagagg cta<0-----[2970 : 2646]-0>taatacgccgatatccaccacaa tag agggaacttcggggacgtaattg tr|Q7T2C8|Q7T2C 382 VFEGEYNT VLIAVGRDACTGKIGLDK ++EGEYNT VLIAVGRDACT KIGLDK ILEGEYNT VLIAVGRDACTDKIGLDK BADN01025334.1 -2576 acgggtaaGTACGTA Intron 10 CAGgtagggcggtagaagcga ttagaaac<0-----[2552 : 2192]-0>tttctggacgcaatgtaa cggagcct ggaggcacacacgtcgcg tr|Q7T2C8|Q7T2C 408 AGVKINE NGKVPVNDEEQTNVPH GVK+N NGK+PVNDEEQTNVPH TGVKVNT K:K[aag] NGKIPVNDEEQTNVPH BADN01025334.1 -2137 aggagaaAAGTAAGTT Intron 11 CAGGagaacgagggcaagcc cgtatac <2-----[2114 : 992]-2> agatctaaaaacatca agcaccc taatacctaggctgcc tr|Q7T2C8|Q7T2C 432 IYAIGDILEGKWELTPVAIQAGKLLARRLYAGATMK IYAIGDILEGKWELTPVAIQAG+LLARRLYAG+T+K IYAIGDILEGKWELTPVAIQAGRLLARRLYAGSTLK BADN01025334.1 -942 atgaggacggatgcacggacggaccgccctggtaca tactgattagagatcctctacggttcggtacgccta ccctactggaagggataccgtcgggaactcgcaacg // Making a E in phase 1 intron Making a G in phase 1 intron Making a V in phase 1 intron Making a S in phase 2 intron Making a K in phase 2 intron >BADN01025334.1.pep MPPIENDTGKNELKSRIQQLIDSNQVIVFSKSYCPFCVKVKDLFKELKVECNVVELDLLE DGTNYQEMLLEMTGQKTVPNVFINKTHLGGCDKTMQAHKDGSLQQLLGGENEAYDYDLIV IGGGSGGLACSKEAAMLGKKVMVLDFVVPTPKGTSWGLGGTCVNVGCIPKKLMHQTALLG TALQDARKFGWEFDETVKHNWETMKTAVNNYIGSLNWGYRVALRDKNVNYVNAYAEFIEP HKIKATNKRGKETFYTAAKFVLATGERPRYLGIPGDKEYCITSDDLFSLSYCPGKTLVIG ASYVALECGGFLAGLGLDVTVMVRSILLRGFDQDMANRAGEHMEEHGVKFLRKFIPVKIE ELEAGTPGKLKVTAKSTETDEILEGEYNTVLIAVGRDACTDKIGLDKTGVKVNTKNGKIP VNDEEQTNVPHIYAIGDILEGKWELTPVAIQAGRLLARRLYAGSTLK // >BADN01025334.1.[9929:833].sp ATGCCTCCCATCGAAAATGACACCGGCAAGAATGAACTCAAGTCCCGGATACAGCAGCTT ATTGACTCCAATCAAGTGATCGTGTTCAGTAAAAGCTACTGTCCGTTTTGTGTAAAGGTG AAAGACCTGTTCAAAGAGCTGAAAGTCGAGTGTAACGTGGTGGAGTTGGATCTGCTAGAG GATGGAACCAACTACCAGGAAATGCTGCTGGAGATGACAGGGCAGAAAACCGTTCCCAAC GTCTTCATCAACAAGACGCACCTCGGCGGCTGCGATAAAACCATGCAGGCCCATAAAGAC GGCAGCCTGCAGCAGCTACTGGGCGGAGAAAACGAAGCCTACGACTACGACCTCATTGTC ATCGGAGGAGGATCTGGAGGTCTGGCCTGCTCAAAGGAAGCCGCTATGTTGGGGAAGAAG GTCATGGTTCTGGACTTTGTTGTTCCGACACCAAAAGGAACCAGCTGGGGTCTGGGCGGA ACATGCGTGAACGTCGGCTGCATTCCCAAAAAGCTGATGCACCAGACGGCCCTCCTGGGC ACGGCCTTGCAGGACGCCCGCAAGTTCGGCTGGGAGTTCGACGAGACAGTGAAACACAAC TGGGAGACGATGAAGACAGCGGTGAACAACTACATCGGCTCGTTGAACTGGGGCTACAGG GTCGCGCTGAGAGACAAGAATGTCAACTATGTCAACGCCTATGCAGAGTTCATTGAACCA CACAAAATCAAGGCAACAAACAAACGAGGGAAGGAGACATTTTACACAGCGGCTAAGTTT GTCTTAGCCACAGGCGAGAGGCCGCGCTACCTGGGCATCCCTGGAGACAAGGAGTATTGC ATCACCAGCGACGACCTGTTCTCACTGTCTTACTGCCCGGGAAAGACCCTGGTGATCGGG GCGTCTTACGTGGCTCTGGAGTGCGGGGGCTTCCTGGCCGGCCTGGGTCTCGACGTCACT GTCATGGTCCGTTCCATTCTGCTGAGGGGCTTCGACCAGGACATGGCCAACCGTGCCGGG GAGCACATGGAGGAGCACGGGGTCAAGTTCCTCCGCAAATTCATCCCTGTAAAGATAGAG GAGCTGGAAGCAGGCACTCCTGGCAAGCTGAAGGTGACAGCCAAGTCTACAGAAACTGAT GAGATCCTGGAGGGAGAGTACAACACTGTGTTGATAGCGGTGGGCCGAGACGCATGCACA GACAAGATTGGCCTGGACAAGACAGGGGTCAAAGTCAACACCAAGAATGGAAAAATTCCA GTCAACGATGAAGAGCAGACCAATGTGCCCCACATCTACGCCATTGGAGACATTCTGGAG GGAAAATGGGAGCTGACACCTGTAGCCATCCAGGCTGGCAGGCTGCTGGCACGACGCCTT TACGCGGGCTCAACACTCAAG // BADN01025334.1 GeneWise match 9929 835 821.33 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 9929 9813 0.00 - 0 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 9812 9141 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 9140 9080 0.00 - 0 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 9079 7614 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 7613 7504 0.00 - 2 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 7503 6095 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 6094 5987 0.00 - 0 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 5986 4740 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 4739 4667 0.00 - 0 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 4666 4539 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 4538 4419 0.00 - 2 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 4418 4275 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 4274 4132 0.00 - 2 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 4131 3758 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 3757 3642 0.00 - 0 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 3641 3197 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 3196 2971 0.00 - 1 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 2970 2646 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 2645 2553 0.00 - 0 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 2552 2192 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 2191 2115 0.00 - 0 BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise intron 2114 992 0.00 - . BADN01025334.1-genewise-prediction-1 BADN01025334.1 GeneWise cds 991 835 0.00 - 1 BADN01025334.1-genewise-prediction-1 //