genewise output
Score 17.23 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

tr|E7F3K0|E7F3K    3 WLPFSALLLWALCLHS                                  
                     +LP S + L   C+HS                                  
                     FLPCSLMALLRFCIHS                                  
BADN01025729.1  3145 ttcttcagccattact                                  
                     ttcgcttcttgtgtac                                  
                     caatcggtgcgttcca                                  


//
>BADN01025729.1.pep
FLPCSLMALLRFCIHS
//
>BADN01025729.1.[3145:3192].sp
TTCTTACCATGTTCCCTGATGGCTCTGCTCAGGTTTTGTATCCACTCA
//
BADN01025729.1	GeneWise	match	3145	3192	17.23	+	.	BADN01025729.1-genewise-prediction-1
BADN01025729.1	GeneWise	cds	3145	3192	0.00	+	0	BADN01025729.1-genewise-prediction-1
//

genewise output
Score 137.18 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

tr|E7F3K0|E7F3K  123 KIYACMMVFFFSNMIENQCMSTGAFEITLN                    
                     +IYACMMVFF+SNMIENQ MSTGAFEITLN                    
                     QIYACMMVFFLSNMIENQLMSTGAFEITLN                    
BADN01025729.1 -6628 catgtaagttcaaaagactataggtgaata                    
                     atacgttttttgattaaattccgctatcta                    
                     gatccgggcccttgtacgagcaattacaat                    


tr|E7F3K0|E7F3K  153                           VPVWSKLESGHLPSMQQLVQILE 
                                               VPVWSKLESGHLPSMQQLVQIL+ 
                               D:D[gat]        VPVWSKLESGHLPSMQQLVQILD 
BADN01025729.1 -6538 GGTGAGTT  Intron 1   TAGATgcgttacgtgccctacccgcatg 
                      <1-----[6537 : 6319]-1>  tctgcatacgatcctaattatta 
                                               gaggaaggttcgccgggtgatgc 


tr|E7F3K0|E7F3K  177 NEMKMSMHMDTLPPHQS                                 
                     NEMKM++HM+T P H S                                 
                     NEMKMNVHMNTRPHHHS                                 
BADN01025729.1 -6247 agaaaagcaaaacccct                                 
                     aatatatatacgcaaac                                 
                     tggggctcgtaaacctc                                 


//
Making a D in phase 1 intron
>BADN01025729.1.pep
QIYACMMVFFLSNMIENQLMSTGAFEITLNDVPVWSKLESGHLPSMQQLVQILDNEMKMN
VHMNTRPHHHS
//
>BADN01025729.1.[6628:6195].sp
CAGATATATGCCTGCATGATGGTGTTCTTCCTCAGTAATATGATTGAAAACCAGTTAATG
TCCACAGGAGCTTTTGAAATCACATTAAATGATGTGCCAGTGTGGTCAAAACTGGAGTCT
GGTCACCTGCCCTCCATGCAGCAGCTTGTGCAAATTTTGGACAATGAGATGAAGATGAAC
GTTCACATGAATACAAGACCACACCACCATTCC
//
BADN01025729.1	GeneWise	match	6628	6197	137.18	-	.	BADN01025729.1-genewise-prediction-1
BADN01025729.1	GeneWise	cds	6628	6538	0.00	-	0	BADN01025729.1-genewise-prediction-1
BADN01025729.1	GeneWise	intron	6537	6319	0.00	-	.	BADN01025729.1-genewise-prediction-1
BADN01025729.1	GeneWise	cds	6318	6197	0.00	-	2	BADN01025729.1-genewise-prediction-1
//