genewise output Score 15.80 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000647_2.0 103 FDLINKDAIAQTDDFSY FD NK A+ + FS+ FDCANKMAVLEVFSFSH BADN01030477.1 6231 tgtgaaaggtggttttc tagcaatcttattctca tctccagttgagcccac // >BADN01030477.1.pep FDCANKMAVLEVFSFSH // >BADN01030477.1.[6231:6281].sp TTTGACTGTGCCAACAAAATGGCTGTTTTGGAAGTGTTCTCCTTCTCACAC // BADN01030477.1 GeneWise match 6231 6281 15.80 + . BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise cds 6231 6281 0.00 + 0 BADN01030477.1-genewise-prediction-1 // genewise output Score 232.26 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000647_2.0 24 PSGTCRSKKTWPKTFPEEELRKRLTPMQYHVTQQKGTE PSG R+KKTWP +F +EE+RKRLTPMQYHVTQ++GTE PSGARRTKKTWPVSFSQEEIRKRLTPMQYHVTQERGTE BADN01030477.1-13602 ctggccaaaatcgattcggaaaccacactcgacgagag ccgcggcaacgctgtcaaatgagtcctaaatcaaggca taaatatggagagcctgagagaccaaggtttcggaatg SPP00000647_2.0 62 AFTGKYVDNKEEGTYHCVVCGAP AF G++ D+K+EGTY CVVCGAP S:S[agt] AFAGEFTDHKDEGTYACVVCGAP BADN01030477.1-13488 AGGTAGGAT Intron 1 CAGTgtgggtagcagggatgtggtggc <2-----[13486:13183]-2> ctcgatcaaaaagcacgttggcc ccaggcattatggcttttctgta SPP00000647_2.0 86 LF SEKKFDSGS LF S KFDSGS LF M:S[agc] SNAKFDSGS BADN01030477.1-13112 ctAGGTAAGAG Intron 2 TAGCtagatgtgt tt <2-----[13104:12485]-2> cacatacgc gc tttatcaaa SPP00000647_2.0 98 WPSFFDLINKDAIAQTDDFSYGM WPSFFDL+ +++I +DDFSYGM G:G[ggt] WPSFFDLMKEESITLSDDFSYGM BADN01030477.1-12456 GGTGAGTT Intron 3 CAGGTtctttgcaaggtaactggtttga <1-----[12455: 8302]-1> gccttattaaactctcaatcagt gacctctggggcctgattcctgg SPP00000647_2.0 122 HRVETTCSQ CGAHLGHLFDDGPRPTK HRVETTCSQ CGAHLGHLFDDGPRPT HRVETTCSQ CGAHLGHLFDDGPRPTG BADN01030477.1 -8230 caggaatacGTACACT Intron 4 CAGtggccgcttgggcacag agtaccgga<0-----[8203 : 6630]-0>ggcatgattaagcgccg caggtcccg tattgacgttcaaacaa SPP00000647_2.0 148 KRYCINSASLSFQPKNSATEEVEASGAAGQSSTSKNE KRYCINSASL+FQPK++A+ + +S A G++ +S ++ KRYCINSASLAFQPKDTASS-ISSSTAEGEAVSSMSD BADN01030477.1 -6578 acttaatgtcgtccagagtt atataggggggataag agagtaccctctacaacccc tcgcccagactgctga acccccgcggtcgcataccc ccccatgtatccagcc // Making a S in phase 2 intron Making a S in phase 2 intron Making a G in phase 1 intron >BADN01030477.1.pep PSGARRTKKTWPVSFSQEEIRKRLTPMQYHVTQERGTESAFAGEFTDHKDEGTYACVVCG APLFSSNAKFDSGSGWPSFFDLMKEESITLSDDFSYGMHRVETTCSQCGAHLGHLFDDGP RPTGKRYCINSASLAFQPKDTASSISSSTAEGEAVSSMSD // >BADN01030477.1.[13602:6469].sp CCTTCAGGAGCACGTCGAACTAAGAAGACATGGCCAGTGAGCTTCTCTCAGGAAGAGATA AGGAAACGCCTCACACCAATGCAGTATCATGTTACCCAGGAGAGAGGAACTGAGAGTGCC TTCGCAGGGGAGTTCACAGATCATAAAGATGAGGGGACCTATGCTTGTGTTGTCTGTGGG GCTCCACTGTTCAGCTCTAATGCTAAATTTGACTCAGGATCAGGTTGGCCATCCTTCTTT GACCTTATGAAGGAGGAGTCCATCACTCTGTCAGATGATTTCTCCTATGGGATGCACAGA GTGGAGACTACCTGCAGCCAGTGTGGAGCTCATCTGGGACACTTGTTTGATGACGGACCA AGACCCACAGGAAAACGCTACTGCATCAACTCGGCCTCGCTGGCTTTCCAGCCCAAAGAT ACAGCCTCCTCCATCTCCAGCTCCACAGCTGAGGGTGAAGCTGTCAGCTCAATGAGCGAC // BADN01030477.1 GeneWise match 13602 6471 232.26 - . BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise cds 13602 13487 0.00 - 0 BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise intron 13486 13183 0.00 - . BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise cds 13182 13105 0.00 - 1 BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise intron 13104 12485 0.00 - . BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise cds 12484 12456 0.00 - 1 BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise intron 12455 8302 0.00 - . BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise cds 8301 8204 0.00 - 2 BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise intron 8203 6630 0.00 - . BADN01030477.1-genewise-prediction-1 BADN01030477.1 GeneWise cds 6629 6471 0.00 - 0 BADN01030477.1-genewise-prediction-1 //