genewise output Score 23.71 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000643_2.0 225 HHHPHHHHHHHRGQQQVDVDQQ H PHH H HRG + V ++ HRSPHHSHTEHRGSRNSPVGRR BADN01026358.1 17821 ccacccacagcagaaaacggcc aggcaagacaaggggagctggg ccctctccaatagcactttaag // >BADN01026358.1.pep HRSPHHSHTEHRGSRNSPVGRR // >BADN01026358.1.[17821:17886].sp CACCGCAGCCCTCACCATAGCCACACAGAACATAGAGGGAGCAGAAACAGTCCTGTTGGA CGACGG // BADN01026358.1 GeneWise match 17821 17886 23.71 + . BADN01026358.1-genewise-prediction-1 BADN01026358.1 GeneWise cds 17821 17886 0.00 + 0 BADN01026358.1-genewise-prediction-1 // genewise output Score 202.85 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000643_2.0 1 MWKALSLTLALCLLVGCSAESETEGARCKLPPEWKVGDVEPMKNALGQV MW L+L L LCLL G AESE G RC+ PP WK+G+VEPM A+G+V MWACLTLLLTLCLLHGGGAESEGGGPRCQQPPAWKIGEVEPMTEAIGRV BADN01026358.1 -8589 atgtcacccactcccgggggaggggcctccccgtaaggggcaaggagcg tgcgtctttctgttagggcagagggcggaacccgatgatactcactggt gggcccgcctccgctgcgagtggtgcctggcacggaggggcgggctctg SPP00000643_2.0 50 TVVAYLQASXLFCLEQAS LNDLL TVVA QASX FCL QAS ++ L TVVALFQASXQFCLVQAS K:R[agg] MDSLR BADN01026358.1 -8442 agggctcgatctttgcgtAGGTACATG Intron 1 CAGGagacc cttcttacggatgttacc <2-----[8386 : 7983]-2> tagtg gggtttgccaaccgggac gccgc SPP00000643_2.0 74 LKLEKQGYPNIAYMVVNNREERSQRLHHLLQERLL-NITLYAQDLSQPD KLE++G ++ YMV+N++ ++Q+LH +L++ L N+TLY Q QPD QKLERRGLKDVIYMVINHQGAQAQKLHSMLEQSLSENVTLYKQLEHQPD BADN01026358.1 -7966 cacgacgcaggatagaaccggcgcaccaacgcactgagactaccgcccg aatagggtaattatttaaagcacaatagttaagtcaatctaaataaaca ggggggtggtgccgctccggaaagggccggggtgtgtctccagcatgtt SPP00000643_2.0 122 AWQAVNAEKDDILVYD CGRLTYH W+ +N EKDD+L+YD CGRLT H VWRTLNGEKDDFLIYD R:R[agg] CGRLTRH BADN01026358.1 -7819 gtcacaggaggtcatgAGGTTTGTT Intron 2 CAGGtgccacc tggctagaaaatttaa <2-----[7769 : 7648]-2> gggtcga cggagcagatctcttc tcttctc SPP00000643_2.0 146 LSLPYTILIHPHVEEAIKHTYCDRICGECSLE +SLPY+I+ HVE AIK TYC R+CG+CS E ISLPYSIIGQGHVEGAIKDTYCKRVCGDCSHE BADN01026358.1 -7625 atccttaagcgcggggaagattacgtggtacg tctcacttgagatagctaacagagtggaggaa tatacccttacttgtgcatgccatatgccttg SPP00000643_2.0 178 SSAQLEECKKATEEVNKPVEEEPRQD S+ EECK T+ +D STEIPEECKADTQP-DADAAPAVEED BADN01026358.1 -7529 GTATACT Intron 3 CAGaagacggtaggacc gggggcggggg <0-----[7529 : 7386]-0>gcatcaagacacac acacccctaaa ctgcaggtaacagt tatttatgaac SPP00000643_2.0 204 HGHHEQGHHEHQGEAERHRHGHHHPHHHHH-HHRGQQQVDVDQQVLSQ GH GHH HGHHH H H H H +GQ Q V QQ L Q TGH---GHH----------HGHHHGHGHSHGHGQGQSQEAVGQQGLEQ BADN01026358.1 -7310 agc gcc cgcccgcgcacgcgcgcacggggccgtgc cga gaa agaaagagagagagagagaactgaagtaa tgt tct tgtttttctctctaatataattgaagaga // Making a R in phase 2 intron Making a R in phase 2 intron >BADN01026358.1.pep MWACLTLLLTLCLLHGGGAESEGGGPRCQQPPAWKIGEVEPMTEAIGRVTVVALFQASXQ FCLVQASRMDSLRQKLERRGLKDVIYMVINHQGAQAQKLHSMLEQSLSENVTLYKQLEHQ PDVWRTLNGEKDDFLIYDRCGRLTRHISLPYSIIGQGHVEGAIKDTYCKRVCGDCSHEST EIPEECKADTQPDADAAPAVEEDTGHGHHHGHHHGHGHSHGHGQGQSQEAVGQQGLEQ // >BADN01026358.1.[8589:7204].sp ATGTGGGCGTGCCTCACCCTGCTCCTCACTCTCTGCCTGCTCCATGGGGGCGGGGCAGAG AGTGAGGGGGGTGGGCCCCGCTGTCAGCAGCCCCCAGCCTGGAAGATAGGGGAGGTGGAG CCCATGACGGAGGCCATTGGCCGTGTGACGGTGGTGGCTCTTTTTCAGGCCAGCTGACAA TTCTGCTTGGTGCAGGCATCCAGGATGGACAGCCTGCGCCAGAAGCTGGAGAGGCGGGGT CTGAAGGATGTGATCTACATGGTCATTAACCACCAGGGGGCACAAGCACAGAAGCTGCAC AGCATGCTGGAGCAGAGTCTGTCTGAGAATGTCACTCTCTACAAACAGCTCGAACATCAG CCTGATGTCTGGCGGACACTGAACGGAGAGAAAGATGACTTTCTCATTTATGACAGGTGT GGCCGTCTTACCCGTCACATTTCACTTCCATACTCCATCATTGGTCAAGGCCATGTTGAG GGTGCGATCAAAGATACGTACTGCAAACGTGTATGTGGGGACTGCAGTCATGAGAGCACT GAGATCCCAGAGGAGTGTAAAGCAGACACACAGCCTGATGCAGATGCTGCTCCAGCTGTG GAAGAAGACACTGGGCATGGTCACCATCATGGGCATCATCATGGTCATGGCCATAGCCAT GGCCATGGACAAGGTCAAAGTCAAGAAGCTGTTGGGCAACAAGGGTTAGAGCAA // BADN01026358.1 GeneWise match 8589 7206 213.83 - . BADN01026358.1-genewise-prediction-1 BADN01026358.1 GeneWise cds 8589 8387 0.00 - 0 BADN01026358.1-genewise-prediction-1 BADN01026358.1 GeneWise intron 8386 7983 0.00 - . BADN01026358.1-genewise-prediction-1 BADN01026358.1 GeneWise cds 7982 7770 0.00 - 1 BADN01026358.1-genewise-prediction-1 BADN01026358.1 GeneWise intron 7769 7648 0.00 - . BADN01026358.1-genewise-prediction-1 BADN01026358.1 GeneWise cds 7647 7530 0.00 - 1 BADN01026358.1-genewise-prediction-1 BADN01026358.1 GeneWise intron 7529 7386 0.00 - . BADN01026358.1-genewise-prediction-1 BADN01026358.1 GeneWise cds 7385 7206 0.00 - 0 BADN01026358.1-genewise-prediction-1 //