genewise output Score 212.40 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000642_2.0 74 LGDLRDKLANGGLTNISFMVVNEQDSQSRAMYWELKRRTAQDIPVYQQS +G LRD+L LT++SFM+VNE+++ SRAMYWELKR+ D+PVYQQ+ IGGLRDRLNRSKLTDVSFMIVNEREALSRAMYWELKRKAPPDVPVYQQA BADN01078433.1 800 aggccgacacaacaggttaagagcggctagattgcaaagccggcgtccg tggtgagtaggatcatcttttaagactcgctagatagacccatctaaac tatgtcggcccaggcgtcgaatgagtgcacgcggggaatgtttggtggt SPP00000642_2.0 123 PLQNDVWEILEGDKDDFLVYD CG P Q+DVWE L+GDKDDFLVYD CG PFQSDVWEELDGDKDDFLVYD R:R[agg] CG BADN01078433.1 947 ctcaggtggcgggaggtcgtgAGGTAAGAC Intron 1 CAGGtg ctagatgaatagaaaatttaa <2-----[1012 : 1532]-2> gg ctatcgggggttcatccgctt tt SPP00000642_2.0 147 YLTFHIVLPFSFLHYPYIEAAIRATYHKNMCNCS LT+H+VLP+SFLHYPY+EAAIRATYHKN+CNCS LLTYHVVLPYSFLHYPYVEAAIRATYHKNICNCS BADN01078433.1 1540 ccatcggcctatcctctggggaagatcaaatatt ttcaatttcagttaacatacctgccaaaatgagc cccctagagctcgccatagtacacctcatcctct SPP00000642_2.0 181 LNANFSISESSDSTKNEPA----GEN +N+ +S ++ T NE A E INSTLSSGNNNSITTNETAQLSVNEP BADN01078433.1 1642 GTGAGTA Intron 2 CAGaatattagaaaaaaaagagctagagc <0-----[1642 : 2111]-0>tacctcggaaagtccaaccatgtaac ttctaacccccccggcgagggtccaa SPP00000642_2.0 203 NQRPNST-------EPVTA---AHHHHHQQHEPHHHHNPYPNN---HKK P S E +TA HHH+ H PHHHH+ N H++ TTLPTSQLGTDEPEEEITAPRSTHHHNLHHHHPHHHHHTTHQNQSHHQQ BADN01078433.1 2190 aatcaaccgaggcgggaagcatacccacccccccccccaaccactcccc cctccgatgcaacaaatcccgccaaaataaaacaaaaaccaaaacaaaa taacatagattaaggacattacttccctttttttccttttcgtacctgg SPP00000642_2.0 239 SGDSDVTGKPKEPTHHSHQEHVH + + T P HHSH HVH DTNQNKTQNLPSP-HHSH-DHVH BADN01078433.1 2337 gaacaaacacctc ccac gcgc acaaaacaatccc aaga aata tatgtatattatc tctc ccct // Making a R in phase 2 intron >BADN01078433.1.pep IGGLRDRLNRSKLTDVSFMIVNEREALSRAMYWELKRKAPPDVPVYQQAPFQSDVWEELD GDKDDFLVYDRCGLLTYHVVLPYSFLHYPYVEAAIRATYHKNICNCSINSTLSSGNNNSI TTNETAQLSVNEPTTLPTSQLGTDEPEEEITAPRSTHHHNLHHHHPHHHHHTTHQNQSHH QQDTNQNKTQNLPSPHHSHDHVH // >BADN01078433.1.[800:2399].sp ATTGGAGGTCTGCGTGACAGGCTGAACCGCAGCAAACTGACGGACGTGTCTTTCATGATA GTAAATGAGCGAGAGGCTCTGTCCAGAGCCATGTACTGGGAGCTGAAGAGAAAAGCTCCG CCTGATGTTCCGGTGTATCAGCAGGCTCCCTTTCAAAGTGACGTGTGGGAGGAGCTGGAT GGTGACAAAGATGACTTCCTGGTCTATGATAGGTGTGGTCTCCTCACCTACCATGTAGTG CTACCGTACAGTTTCCTGCACTACCCATATGTAGAGGCTGCAATCAGAGCCACCTATCAC AAAAATATCTGCAATTGCTCTATTAATTCCACTTTATCAAGCGGCAACAACAACAGCATC ACGACGAACGAGACAGCGCAGTTGAGTGTCAACGAACCAACTACATTACCCACAAGTCAA CTGGGAACTGATGAACCAGAGGAGGAAATCACAGCTCCTAGATCCACTCATCACCACAAC CTTCATCATCATCATCCTCATCACCACCATCATACTACTCACCAGAATCAATCCCACCAT CAGCAGGATACAAATCAGAATAAAACTCAAAATCTTCCATCTCCCCATCACAGTCACGAC CACGTCCAT // BADN01078433.1 GeneWise match 800 2399 225.38 + . BADN01078433.1-genewise-prediction-1 BADN01078433.1 GeneWise cds 800 1011 0.00 + 0 BADN01078433.1-genewise-prediction-1 BADN01078433.1 GeneWise intron 1012 1532 0.00 + . BADN01078433.1-genewise-prediction-1 BADN01078433.1 GeneWise cds 1533 1641 0.00 + 1 BADN01078433.1-genewise-prediction-1 BADN01078433.1 GeneWise intron 1642 2111 0.00 + . BADN01078433.1-genewise-prediction-1 BADN01078433.1 GeneWise cds 2112 2399 0.00 + 0 BADN01078433.1-genewise-prediction-1 // genewise output Score 19.02 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000642_2.0 261 HNHRFYTVFSFIILFYIM H H+ Y + F + FYI+ HLHKCYILALFKLFFYIL BADN01078433.1 -4388 ctcattacgctattttat ataagattcttatttatt cgcatcattttagttcta // >BADN01078433.1.pep HLHKCYILALFKLFFYIL // >BADN01078433.1.[4388:4333].sp CACTTGCACAAATGTTACATACTTGCTCTTTTTAAATTGTTTTTTTACATTTTA // BADN01078433.1 GeneWise match 4388 4335 19.02 - . BADN01078433.1-genewise-prediction-1 BADN01078433.1 GeneWise cds 4388 4335 0.00 - 0 BADN01078433.1-genewise-prediction-1 //