genewise output Score 76.24 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000640_2.0 112 YLSGSKVMPGSEPAAHCYCGHQ FGQF Y SG +++PGS P A+ Y GHQ FG + YASGGRLLPGSIPLAYRYGGHQ FGYW BADN01079895.1 759 tgaggacccgtaccgtatggccGTAGTGT Intron 1 TAGtgtt acggggttcgctctcagaggaa<0-----[825 : 1553]-0>tgag tcttcaggaaaattacatgttg tccg SPP00000640_2.0 138 AGQLGDGAACYLGEVKA AGQSPE AGQLGDG A LG+ G+ AGQLGDGRAHSLGQYTN P:R[agg] KGEI-- BADN01079895.1 1566 ggccgggcgctcgctaaAGGTGAGAG Intron 2 CAGGagga cgatgaggcactgaaca <2-----[1619 : 1735]-2> agat gtggtttaatcctgtcc agaa SPP00000640_2.0 162 LLRENPTGRWEIQVKGAGLTPYS WE+Q+KG+G TPYS ---------WELQLKGSGKTPYS R:R[agg] BADN01079895.1 1749 tgcccagtgaacttAGGTATGTT Intron 3 CAGG gatatagcgaccac <2-----[1793 : 2181]-2> gacgtactgaaata SPP00000640_2.0 186 QADGRKVLRSSIREFLCSEAVFALGVPTTRA DGR V+RSS+REFLCSEA+ LGVPT+RA SGDGRAVIRSSVREFLCSEAMHFLGVPTSRA BADN01079895.1 2183 tgggcggacttgagtctaggactcggcaaag cgaggcttgcctgattggactattgtccggc aaccatgccgtcaatgccgggtcgttcccgc // Making a R in phase 2 intron Making a R in phase 2 intron >BADN01079895.1.pep YASGGRLLPGSIPLAYRYGGHQFGYWAGQLGDGRAHSLGQYTNRKGEIWELQLKGSGKTP YSRSGDGRAVIRSSVREFLCSEAMHFLGVPTSRA // >BADN01079895.1.[759:2275].sp TATGCCAGTGGTGGCAGACTGCTGCCAGGATCAATACCTCTTGCATACAGATATGGGGGT CATCAGTTTGGCTACTGGGCGGGTCAGCTGGGTGATGGTCGAGCACATTCCCTCGGTCAG TATACCAACAGGAAAGGGGAAATATGGGAACTCCAGCTTAAAGGCTCTGGGAAAACACCA TATTCAAGGTCAGGAGACGGCCGAGCTGTGATCCGCTCGTCTGTCAGAGAATTTCTGTGC AGCGAGGCGATGCATTTCCTGGGTGTTCCCACCAGCAGGGCC // BADN01079895.1 GeneWise match 759 2275 86.23 + . BADN01079895.1-genewise-prediction-1 BADN01079895.1 GeneWise cds 759 824 0.00 + 0 BADN01079895.1-genewise-prediction-1 BADN01079895.1 GeneWise intron 825 1553 0.00 + . BADN01079895.1-genewise-prediction-1 BADN01079895.1 GeneWise cds 1554 1618 0.00 + 0 BADN01079895.1-genewise-prediction-1 BADN01079895.1 GeneWise intron 1619 1735 0.00 + . BADN01079895.1-genewise-prediction-1 BADN01079895.1 GeneWise cds 1736 1792 0.00 + 1 BADN01079895.1-genewise-prediction-1 BADN01079895.1 GeneWise intron 1793 2181 0.00 + . BADN01079895.1-genewise-prediction-1 BADN01079895.1 GeneWise cds 2182 2275 0.00 + 1 BADN01079895.1-genewise-prediction-1 // genewise output Score 15.49 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000640_2.0 669 ARGLVPYDSKPPV ARG+ P S PP+ ARGIDPGSSLPPL BADN01079895.1 -802 gagagcgaacccc cggtacgggtcct aattttcctgaag // >BADN01079895.1.pep ARGIDPGSSLPPL // >BADN01079895.1.[802:762].sp GCAAGAGGTATTGATCCTGGCAGCAGTCTGCCACCACTG // BADN01079895.1 GeneWise match 802 764 15.49 - . BADN01079895.1-genewise-prediction-1 BADN01079895.1 GeneWise cds 802 764 0.00 - 0 BADN01079895.1-genewise-prediction-1 //