genewise output Score 14.39 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000640_2.0 595 NPHVVLRNYIAQNAIAAAEN N H + Y+ +NA A+++ NEHFISSGYLFENAPFASDH BADN01010693.1 3471 agctattgtttgagctgtgc aaattccgattaacctccaa tatttaattatattctcttt // >BADN01010693.1.pep NEHFISSGYLFENAPFASDH // >BADN01010693.1.[3471:3530].sp AATGAACATTTTATTTCATCAGGTTATTTATTTGAAAATGCTCCCTTTGCCTCTGATCAT // BADN01010693.1 GeneWise match 3471 3530 14.39 + . BADN01010693.1-genewise-prediction-1 BADN01010693.1 GeneWise cds 3471 3530 0.00 + 0 BADN01010693.1-genewise-prediction-1 // genewise output Score 258.65 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000640_2.0 506 ELAMLVSMAQSNPALFQMISDRGTVSRQLERLSRLKELMDTTEEQLRVK ELAML+SMAQSNPALFQMISDR T++RQL+RLS+LK+LMD +EE+L+ K ELAMLLSMAQSNPALFQMISDRMTIARQLDRLSKLKDLMDISEEELKTK BADN01010693.1 -2229 gcgacctagcaacgctcaatgaaaagaccgacaacagcagaagggcaaa atctttctcagaccttattcagtctcgatagtgataattatgaaataca gggggctgtgccaggcggcacggaaggaacgccagacggcccgggcaca SPP00000640_2.0 555 HTEHWSDWIQKY QRLARECESGV H + W+ WI +Y +RLARE E HADEWTHWITRY R:R[agg] KRLARELEGQS BADN01010693.1 -2082 cgggtactaactAGGTGAGAG Intron 1 CAGGaccgcgcggca acaagcagtcga <2-----[2044 : 1807]-2> agtcgatagag tttggccgcact gtgtagggcat SPP00000640_2.0 579 DVKDVQTERVRVMNNNNPHVVLRNYIAQNAIAAAENGDFSE DV+ VQ ERVRVM++ NP VVLRNYIAQNAI AAE+GDFSE DVQAVQEERVRVMDSTNPRVVLRNYIAQNAIEAAESGDFSE BADN01010693.1 -1772 ggcggcggcgagagaaaccggcaatagcagaggggaggttg atactaaagtgttagcacgtttgaatcaactaccaggatca tggcggggaggggccccatgacgcctcgtatgttgtacctg SPP00000640_2.0 620 VQRVLKVLEKPFSVQEGLEQPGWMGR VQ+VLKVLEKPFS Q LE P W+GR VQQVLKVLEKPFSSQPDLELPAWVGR BADN01010693.1 -1649 GTCAGGC Intron 2 CAGgccgcagcgactttccgcgccgtggc <0-----[1649 : 1368]-0>taattattaactccacatatccgtgg cggccgtgggcctcgatgattgggca SPP00000640_2.0 646 GGAAIPGERDETEEEGSNSSGAGARGLVPYDSKPPVWANEICVT GGA GERDE +E +S + AR VPYDSKPP WA++ICVT GGATEQGERDEGQE--AEASTSTARNPVPYDSKPPAWAHKICVT BADN01010693.1 -1289 gggagcggagggcg gggtatagaacgctgaaccgtgcaatga ggccaagagaagaa caccccccgactcaagacccgcaatgtc tgccagaggcaagg gaaaactcactgctccgtatgttactca // Making a R in phase 2 intron >BADN01010693.1.pep ELAMLLSMAQSNPALFQMISDRMTIARQLDRLSKLKDLMDISEEELKTKHADEWTHWITR YRKRLARELEGQSDVQAVQEERVRVMDSTNPRVVLRNYIAQNAIEAAESGDFSEVQQVLK VLEKPFSSQPDLELPAWVGRGGATEQGERDEGQEAEASTSTARNPVPYDSKPPAWAHKIC VT // >BADN01010693.1.[2229:1162].sp GAGCTGGCGATGCTGCTCTCTATGGCTCAGAGCAACCCAGCGCTGTTCCAGATGATCTCA GACAGGATGACAATAGCGAGGCAACTAGACAGGCTCAGCAAACTGAAAGACCTGATGGAC ATCAGCGAGGAGGAGCTCAAAACCAAACATGCTGATGAGTGGACCCACTGGATCACACGC TATAGGAAGCGTCTGGCTCGAGAGCTGGAGGGCCAAAGTGATGTGCAGGCCGTGCAGGAG GAGCGAGTGAGGGTGATGGACAGCACCAACCCACGTGTGGTACTCAGGAACTACATTGCC CAGAATGCAATTGAGGCTGCTGAGAGTGGAGACTTCTCTGAGGTCCAGCAGGTCCTCAAG GTTCTGGAGAAGCCCTTCTCTTCCCAGCCAGATCTGGAACTTCCTGCGTGGGTGGGCCGA GGTGGGGCCACCGAACAGGGAGAGAGGGACGAAGGACAGGAGGCGGAAGCATCAACATCC ACTGCCAGAAACCCTGTGCCCTATGACAGCAAGCCTCCAGCTTGGGCTCATAAAATCTGT GTCACA // BADN01010693.1 GeneWise match 2229 1164 259.65 - . BADN01010693.1-genewise-prediction-1 BADN01010693.1 GeneWise cds 2229 2045 0.00 - 0 BADN01010693.1-genewise-prediction-1 BADN01010693.1 GeneWise intron 2044 1807 0.00 - . BADN01010693.1-genewise-prediction-1 BADN01010693.1 GeneWise cds 1806 1650 0.00 - 1 BADN01010693.1-genewise-prediction-1 BADN01010693.1 GeneWise intron 1649 1368 0.00 - . BADN01010693.1-genewise-prediction-1 BADN01010693.1 GeneWise cds 1367 1164 0.00 - 0 BADN01010693.1-genewise-prediction-1 //