genewise output Score 384.74 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000639_2.0 1 MATDVDKTPAGEQKDDHEDRGTPSSRRGRSRFTQISSLFIIAAIPVISF MA DVDKT +D H+ TP S +R + +L+++ A+P+++F MAADVDKT---TPEDGHQ---TPGSGSWITR--GMWTLLMVTAVPLLAF BADN01094294.1 3106 agggggaa acgggcc acgtgttaaa gataccagaggcccgt tccataac ccaagaa ccgcgcgtcg gtgcttttcctcttct gcgcgtaa ccgtgcg cgctacgcca gggggcgcttcttcgt SPP00000639_2.0 50 CIKYYLDIQFVKRH EAGLKALGADGL IKYY D Q++KRH E ++ LGA+GL GIKYYQDAQLLKRH EESVRTLGAEGL BADN01094294.1 3229 gaattcggcccaccGTGAGTT Intron 1 TAGggagcacggggc gtaaaaacattaga<0-----[3271 : 4133]-0>aagtgctgcagt gcgtcatcgccatt agttatgtcgac SPP00000639_2.0 76 FFFSSLDTDHDLYLSPEEFKPIAEKLT F+FSSLDT+HDLYLSPEEFKPIAEKLT FLFSSLDTNHDLYLSPEEFKPIAEKLT G:G[ggg] BADN01094294.1 4170 tcttttgaacgctcacggtacaggacaGGTACATC Intron 2 tttcctacaaatatgcaatactcaatc <1-----[4252 : 4362] tccccaccctcctatgggtattagaca SPP00000639_2.0 103 VAPPPEYEEEIPHDPNGETLTLHAKMQPLLLESMTKSKDGFLG + PP ++EEE+ HDPNGETLTL AKMQPLLL+SMTKSKDGFLG ITPPADFEEEVIHDPNGETLTLEAKMQPLLLDSMTKSKDGFLG BADN01094294.1 4360 CAGGGaaccggtggggacgcaggatatggaacccccgtaaaaaggtcg -1> tccccataaattaacagactctacatactttactcagaagttg tacgattagagctcttaatgcggcaggcggtccgaacgtcctg SPP00000639_2.0 147 VSHSSLSGLRSWKRPAISSSTFYASQ VSHSSL+GLRSWK PA+ SS+F ASQ VSHSSLAGLRSWKSPAVPSSSFSASQ BADN01094294.1 4494 GTAAGAC Intron 3 CAGgtcatcggccttaacggctttttgac <0-----[4494 : 4676]-0>tcagctcgtgcgagcctcccctccga ttcctgtcgcaggcgagtctcctccg SPP00000639_2.0 173 FKVFLPPSGKSAVGDTWWIIPSELNIFTGYLPNNRFHPPTPRGKE F+VFLPP K VGDTWW+IPSELNIFTGYLPNNR+HPPTP+GKE FRVFLPPKNKVEVGDTWWVIPSELNIFTGYLPNNRYHPPTPKGKE BADN01094294.1 4755 tagttccaaagggggattgacagcaatagtccaactcccacagag tgtttccaaatatgacggttcgatattcgatcaagaaccccagaa cgccgcagcggagacagggtccgcccctgcgcttttctcaagcag SPP00000639_2.0 218 VLIHSLLSMFHPRPFVKSRFAPQGAV VLIHSLLSMFHPRPF+KSRFAPQGAV VLIHSLLSMFHPRPFIKSRFAPQGAV BADN01094294.1 4890 GTATTTT Intron 4 CAGgcacttcaatcccctaatctgccggg <0-----[4890 : 4967]-0>tttacttgttacgcttacgtccagct tccctggtgtccgaccaattttacac SPP00000639_2.0 244 ACIRATSDFYYDIVFR ACIRA++DFYYDIVFR ACIRASNDFYYDIVFR BADN01094294.1 5046 gtacgaagtttgagta cgtgcgaataaatttg ccttcctctttcctcg // Making a G in phase 1 intron >BADN01094294.1.pep MAADVDKTTPEDGHQTPGSGSWITRGMWTLLMVTAVPLLAFGIKYYQDAQLLKRHEESVR TLGAEGLFLFSSLDTNHDLYLSPEEFKPIAEKLTGITPPADFEEEVIHDPNGETLTLEAK MQPLLLDSMTKSKDGFLGVSHSSLAGLRSWKSPAVPSSSFSASQFRVFLPPKNKVEVGDT WWVIPSELNIFTGYLPNNRYHPPTPKGKEVLIHSLLSMFHPRPFIKSRFAPQGAVACIRA SNDFYYDIVFR // >BADN01094294.1.[3106:5093].sp ATGGCCGCGGACGTGGATAAAACAACCCCCGAGGATGGGCACCAGACCCCGGGCTCTGGA TCCTGGATCACCAGAGGGATGTGGACGCTGCTCATGGTCACTGCTGTCCCTCTTCTCGCG TTTGGGATCAAGTATTACCAAGATGCCCAGCTCCTCAAACGTCATGAAGAGAGTGTTCGA ACTCTGGGTGCCGAGGGACTCTTTCTCTTCTCCTCCTTAGACACCAACCATGACCTCTAT CTAAGTCCGGAGGAGTTTAAACCTATTGCAGAGAAACTCACAGGGATTACACCCCCGGCA GATTTTGAAGAGGAAGTGATCCATGACCCTAATGGAGAAACTTTGACCTTGGAGGCCAAA ATGCAGCCCCTGCTGCTTGACTCCATGACAAAAAGCAAGGATGGCTTCCTTGGGGTTTCT CACAGCTCTCTGGCTGGCCTGCGCTCATGGAAGAGCCCGGCAGTGCCTTCCTCTTCCTTC TCTGCCAGCCAGTTCAGGGTCTTCTTGCCCCCAAAGAACAAGGTGGAAGTGGGAGACACA TGGTGGGTGATTCCCAGCGAGCTCAACATCTTCACTGGGTACCTGCCCAATAATCGTTAT CACCCTCCCACACCAAAGGGCAAAGAGGTTCTCATCCACTCTTTGCTGAGTATGTTTCAC CCCCGGCCATTCATCAAATCACGTTTTGCTCCTCAAGGCGCAGTCGCCTGCATTCGTGCC AGCAATGACTTTTATTATGACATCGTTTTCAGG // BADN01094294.1 GeneWise match 3106 5093 389.73 + . BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise cds 3106 3270 0.00 + 0 BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise intron 3271 4133 0.00 + . BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise cds 4134 4251 0.00 + 0 BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise intron 4252 4362 0.00 + . BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise cds 4363 4493 0.00 + 2 BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise intron 4494 4676 0.00 + . BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise cds 4677 4889 0.00 + 0 BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise intron 4890 4967 0.00 + . BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise cds 4968 5093 0.00 + 0 BADN01094294.1-genewise-prediction-1 // genewise output Score 15.58 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000639_2.0 108 PEYEEEIPHDPNGET PE+E +P NGET PEFEHSLP---NGET BADN01094294.1 -4155 cgtgctcc agga cataactc agac agcacttt taag // >BADN01094294.1.pep PEFEHSLPNGET // >BADN01094294.1.[4155:4118].sp CCAGAGTTCGAACACTCTCTTCCTAATGGAGAAACG // BADN01094294.1 GeneWise match 4155 4120 17.57 - . BADN01094294.1-genewise-prediction-1 BADN01094294.1 GeneWise cds 4155 4120 0.00 - 0 BADN01094294.1-genewise-prediction-1 //