genewise output Score 15.73 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000636_2.0 29 VYDLSKLSVLLSQSP +YDL+ LL Q P IYDLNLYQFLLCQRP BADN01079312.1 10352 atgcactctcctccc taatataatttgagc tttgttcgtttcgta // >BADN01079312.1.pep IYDLNLYQFLLCQRP // >BADN01079312.1.[10352:10396].sp ATTTATGATCTGAATCTTTACCAGTTTCTTCTTTGCCAGCGTCCA // BADN01079312.1 GeneWise match 10352 10396 15.73 + . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 10352 10396 0.00 + 0 BADN01079312.1-genewise-prediction-1 // genewise output Score 403.42 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000636_2.0 22 AAQPLHWVYDLSKLSVLLSQ-SPQPEFRPESANPFYRRNTGQQSCYGDQ AAQP+HW+Y+ +L +LS P PEFRP+SANPFYRR TG+Q+CYGDQ AAQPMHWIYNPDRLKEVLSDLEPSPEFRPQSANPFYRRETGEQTCYGDQ BADN01079312.1-12114 ggccactatacgacaggctgcgctcgtccctgacttcagaggcattggc ccactagtaacagtaattcatacccatgcaccactaggacgaacgagaa acgcgcgcctacgcaatctttgctggtgcgagttcccggacggcctacg SPP00000636_2.0 70 AFILLESLSECG LNVEDFKQRTY A++LLESLS+CG ++V+D+ +R Y AYVLLESLSQCG G:D[gat] VDVQDLTRRIY BADN01079312.1-11967 gtgccgtcactgGGTACTGA Intron 1 CAGATgggcgtaccat catttactgagg <1-----[11930:11199]-1> tataatcggta gccggaagtgta ataacgccccc SPP00000636_2.0 94 KFFGPGSEYDTPVNDPYRDKG PR KFFGPG+ YD P+NDPYR KG P+ KFFGPGTVYDLPLNDPYRKKG A:G[ggc] PK BADN01079312.1-11163 attgcgagtgcccagctcaagGGTACATG Intron 2 TAGGCca attgcgctaatctaacagaag <1-----[11099:10466]-1> ca gctcaaagccgtctttcggaa ca SPP00000636_2.0 118 PQLPIEGPWRHASLKGFIKNVDAGKEET LPI+GPWR+ SLK F++NVDAGKEET AILPIDGPWRNGSLKAFFRNVDAGKEET G:G[ggc] BADN01079312.1-10457 gaccaggctaagacagttaaggggaggaGGTAAAGA Intron 3 cttctagcggaggtacttgatacgaaac <1-----[10372:10287] ctcctccaggcgcgatccatgctcaaat SPP00000636_2.0 146 CETDTQIDGVTKLAPIVACYAGKPEMLEKVEEAVRVTQNNDLCV C+ D Q+DGVTKLAP+VA YAG+PEMLEKVEEA+RVTQNND+CV CDVDCQMDGVTKLAPVVAMYAGRPEMLEKVEEAMRVTQNNDMCV BADN01079312.1-10289 GAGGCtgggtcagggaacgcgggatggccgacgaggggacgacaagatg -1> gatagatagtcatccttctacggcattaataactgtcaaaatgt ttgctggttgcggtaggcgctaatagggaggacggccgtttgtg SPP00000636_2.0 191 AETLAAA FLEHFILNGPDPKALD A TLAAA FLEHFILNGPD LD AVTLAAA R:R[agg] FLEHFILNGPDHNVLD BADN01079312.1-10152 ggatgggAGGTAATAA Intron 4 CAGGttgctacagcgcagcg ctctccc <2-----[10129:10007]-2> ttaatttagcaaatta tgagtag tggtctgttaccttgt SPP00000636_2.0 215 AVLKQLSDPERKNPQELDKAVI H AVL QL+DP+R+NPQ+LD+AVI H AVLAQLNDPKRQNPQDLDRAVI G:A[gcg] H BADN01079312.1 -9957 ggcgctagcaacaccgcgaggaGGTAAAGC Intron 5 AAGCGc cttcataacagaacaatagctt <1-----[9890 : 9038]-1> a atgtggtcggagctgtgcgtct t SPP00000636_2.0 239 IHQVKDNLNKKPKELIPAVFPNTX IHQVKDNL K ++L+PAVF NTX IHQVKDNLAKTSQQLVPAVFTNTX G:A[gct] BADN01079312.1 -9032 accgagacgaatcccgcggtaaatGGTAAGCC Intron 6 taataaatcaccaattccttcacg <1-----[8959 : 8591] ccgggccacgacagtattgcccaa SPP00000636_2.0 263 LPGAFQAALHGVLTASSYEQAVRDTMSCGGCTCSRSSFIGACIG LPGAFQ ALH VLT + ++ VR TM CGGCT SR+SFIGAC+G LPGAFQGALHVVLTQNQLDEGVRVTMRCGGCTASRASFIGACFG BADN01079312.1 -8593 CAGCTtcggtcggccggcacactggggagaactggtagacgttaggttg -1> tcgctagctatttcaaataagtgtctgggggccggccttgcgtg gctgcgaggtacgggcggtaccgccgccgaccccacccaactta SPP00000636_2.0 308 AQ VGLEGIPASWKSKTLRCNTLLDLS AQ GL+GIP W+ +T R LL+L+ AQ TGLQGIPQCWRERTFRYPLLLELA BADN01079312.1 -8456 gcGTACTGT Intron 7 CAGagccgaccttagaatatccctgcg ca<0-----[8450 : 7243]-0>cgtagtcagggagctgactttatc ag cccgacagtggggacattgggggt SPP00000636_2.0 334 RKVV VV ENVV BADN01079312.1 -7170 gagg aatt gtgc // Making a D in phase 1 intron Making a G in phase 1 intron Making a G in phase 1 intron Making a R in phase 2 intron Making a A in phase 1 intron Making a A in phase 1 intron >BADN01079312.1.pep AAQPMHWIYNPDRLKEVLSDLEPSPEFRPQSANPFYRRETGEQTCYGDQAYVLLESLSQC GDVDVQDLTRRIYKFFGPGTVYDLPLNDPYRKKGGPKAILPIDGPWRNGSLKAFFRNVDA GKEETGCDVDCQMDGVTKLAPVVAMYAGRPEMLEKVEEAMRVTQNNDMCVAVTLAAARFL EHFILNGPDHNVLDAVLAQLNDPKRQNPQDLDRAVIAHIHQVKDNLAKTSQQLVPAVFTN TXALPGAFQGALHVVLTQNQLDEGVRVTMRCGGCTASRASFIGACFGAQTGLQGIPQCWR ERTFRYPLLLELAENVV // >BADN01079312.1.[12114:7157].sp GCAGCCCAGCCCATGCACTGGATCTACAATCCAGACAGGCTCAAAGAAGTTCTCTCTGAT CTTGAGCCCTCTCCGGAGTTTCGGCCCCAGTCAGCGAATCCTTTCTACCGCAGGGAGACA GGCGAGCAGACCTGCTATGGAGACCAGGCGTACGTCCTGCTGGAATCACTGAGTCAGTGT GGAGATGTAGATGTACAAGACTTGACCCGCCGCATCTACAAGTTCTTTGGCCCAGGAACA GTGTACGACCTGCCTCTCAATGATCCTTACCGGAAGAAAGGAGGCCCCAAAGCCATTCTC CCCATTGACGGCCCATGGAGGAACGGGAGCCTGAAAGCTTTCTTCAGAAATGTGGACGCT GGCAAAGAAGAAACTGGCTGTGATGTGGACTGTCAGATGGATGGTGTGACCAAGCTGGCT CCAGTGGTGGCCATGTACGCTGGACGACCTGAAATGCTGGAGAAAGTGGAGGAAGCCATG CGGGTCACCCAGAATAATGATATGTGTGTGGCTGTGACATTGGCTGCAGCGAGGTTTTTG GAGCATTTCATTCTGAATGGTCCAGACCACAATGTTCTGGATGCAGTTCTGGCTCAGTTG AATGACCCGAAGAGACAGAACCCTCAGGATCTGGACAGGGCTGTCATTGCGCATATCCAC CAGGTGAAGGACAACCTAGCCAAGACATCCCAACAGCTTGTACCTGCTGTGTTCACCAAC ACATGAGCTTTGCCCGGTGCGTTCCAGGGAGCGCTGCATGTAGTCCTGACGCAGAACCAG TTGGATGAAGGCGTCAGGGTCACCATGCGCTGCGGGGGATGCACCGCCAGCCGAGCCTCC TTCATAGGAGCCTGTTTTGGAGCACAGACCGGCCTCCAGGGAATCCCACAGTGTTGGAGG GAGAGGACATTCAGATATCCTCTGCTGTTGGAGCTGGCTGAGAATGTGGTC // BADN01079312.1 GeneWise match 12114 7159 403.42 - . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 12114 11931 0.00 - 0 BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise intron 11930 11199 0.00 - . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 11198 11100 0.00 - 2 BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise intron 11099 10466 0.00 - . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 10465 10373 0.00 - 2 BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise intron 10372 10287 0.00 - . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 10286 10130 0.00 - 2 BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise intron 10129 10007 0.00 - . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 10006 9891 0.00 - 1 BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise intron 9890 9038 0.00 - . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 9037 8960 0.00 - 2 BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise intron 8959 8591 0.00 - . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 8590 8451 0.00 - 2 BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise intron 8450 7243 0.00 - . BADN01079312.1-genewise-prediction-1 BADN01079312.1 GeneWise cds 7242 7159 0.00 - 0 BADN01079312.1-genewise-prediction-1 //