genewise output Score 16.89 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000631_2.0 448 TVCMKRLEKCLKILKK ++C KRL LK+ +K SICCKRLRCALKLQRK BADN01005542.1 7175 tattaacatgtaccaa ctggagtggctataga ccccaagattagcgag // >BADN01005542.1.pep SICCKRLRCALKLQRK // >BADN01005542.1.[7175:7222].sp TCCATCTGCTGCAAAAGACTGAGATGTGCTTTAAAGCTCCAGAGAAAG // BADN01005542.1 GeneWise match 7175 7222 16.89 + . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 7175 7222 0.00 + 0 BADN01005542.1-genewise-prediction-1 // genewise output Score 677.97 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000631_2.0 1 MNSENFRLSEKLVSASYVRQGLDARRGHEQLIRRLLDQ MNSENF LSEK+VS SY+RQG ARRGHEQLIR LL+Q MNSENFTLSEKIVSTSYIRQGCQARRGHEQLIRHLLEQ BADN01005542.1 -7896 aaagatacagaagtattaccgtcgccgcgccaactcgc tagaatctgaattcccatgaggacgggaaattgattaa gctacccgtggccgccctagccggccccggccacaggg SPP00000631_2.0 39 GKCPEEGWSESTIELFLNELAVMDSN GKCPEEGWSE TIELFLNELAVMDSN GKCPEEGWSEGTIELFLNELAVMDSN BADN01005542.1 -7782 GTAACGT Intron 1 CAGgatcgggtaggaagcttagcggagaa <0-----[7782 : 7700]-0>gagcaagggagctatttaatcttaga tgtagaagtgtcagccgtggtggcct SPP00000631_2.0 65 NFLGNCGVGEREGRVASSLVARRHY NFLGNCGVGEREGRVASSLVARRHY NFLGNCGVGEREGRVASSLVARRHY R:R[agg] BADN01005542.1 -7621 atcgatggggaggcggtacggacctAGGTTCAAG Intron 2 attgaggtgagaggtccgttcggaa <2-----[7544 : 6725] ccccctcggagacggtcctgaaatc SPP00000631_2.0 90 LIHGIGRSGDIAAVQPKAAGSSLLNKITNSVVLDVLKLT LIHGIGRSGDIAA+QPKAAGSSLLNK+TNS+VLD+LKL+ LIHGIGRSGDIAAIQPKAAGSSLLNKLTNSIVLDILKLS BADN01005542.1 -6727 CAGGtacgagctggaggaccagggtaccaacaatagtgatact -2> ttagtggcgatcctacaccgcgttaatcactttattatc gctcatgatcttttaaataaccagtggccccggccagca SPP00000631_2.0 130 VRSVSSCFVVPMATGMSLTLCFL VRSV+SCFVVPMATGMSLTLCFL G:G[ggt] VRSVASCFVVPMATGMSLTLCFL BADN01005542.1 -6606 GGTGTGTT Intron 3 CAGGTgcaggattggcagagaatatttc <1-----[6605 : 6434]-1> tggtcggtttctccgtgtctgtt gctggtctattgaaagcgtgctg SPP00000631_2.0 154 TLRHRRPKARYILWPRIDQKSCFKSMVTA TLRHRRPKARYI+WPRIDQKSCFK+M+TA TLRHRRPKARYIIWPRIDQKSCFKAMITA BADN01005542.1 -6362 accccacagctaatccagcatttagaaag ctgaggcacgattgcgtaaacgtacttcc ctttgacgtctctgtcccggctcacgcaa SPP00000631_2.0 183 FEPVVIENVLEGDELRTNLEEVE FEPVV+ENVLEGDELRT+LE VE G:G[ggc] FEPVVVENVLEGDELRTDLETVE BADN01005542.1 -6275 GGTGATAA Intron 4 TAGGCtgcggggagcggggtcagtgagg <1-----[6274 : 5924]-1> tactttaattagaatgcatacta tatgtggtatattgggacgaatg SPP00000631_2.0 207 RKIEEFGAENILCVHSTTSCFAPRVPDR KI+E+GAENILCVHSTTSCFAPRVPDR HKIKELGAENILCVHSTTSCFAPRVPDR BADN01005542.1 -5852 caaagcgggaattgctaatttgccgcga aataatgcaattgtaccccgtccgtcag cacggcaaaccgtttaaacctcggctcg SPP00000631_2.0 235 LEELSVLCAKHDIPHIVNNAYGV LEEL+ +C+K+DIPHIVNNAYGV -:Q[cag] LEELAAMCSKYDIPHIVNNAYGV BADN01005542.1 -5768 CAAGGCTTT Intron 5 TAGGcggcggattatgaccagaagtgg <2-----[5766 : 5676]-2> taatcctgcaaatcattaacagt tgggctgtcatctccatctacag SPP00000631_2.0 258 QSSKCMHLIQQ GARVGRIDAFVQSLD QSSKCMHLIQQ GARVGRIDAFVQSLD QSSKCMHLIQQ GARVGRIDAFVQSLD BADN01005542.1 -5605 cttataccaccGTAGGTA Intron 6 CAGggcggaaggtgcatg accagtattaa<0-----[5572 : 5390]-0>gcgtggtacttagta gacacgctaag gtttaattctagcgc SPP00000631_2.0 284 KNFMVPVGGAIIAGFDENFIQEISKIYPG KNFMVPVGGAIIAGFDE+FIQEISK+YPG KNFMVPVGGAIIAGFDESFIQEISKMYPG BADN01005542.1 -5344 aatagcggggaaggtggttacgaaaatcg aatttctggcttcgtaacttaatgatacg gccgtaatccacatttgcccggacggtac SPP00000631_2.0 313 ------------RASASPSLDVL RASASPSLDVL -:N[aac] LSNSLLGLLCLGRASASPSLDVL BADN01005542.1 -5257 AAGTATTAA Intron 7 CAGCttatccgcctcgcgtgtctcggc <2-----[5255 : 4235]-2> tcacttgttgtggcccccctatt aacagtctttataatcatcttcc SPP00000631_2.0 324 ITLLTLGANGYKKLLADRK ELYGHLA ITLLTLGA+GYKKLL++RK E+Y LA ITLLTLGASGYKKLLSERK EIYSFLA BADN01005542.1 -4164 aaccacggagtaacctgaaGTGAGAG Intron 8 CAGgatttcg tcttctgcggaaattcaga<0-----[4107 : 2115]-0>atacttc cctctgaccctgacgaaag gttgcgt SPP00000631_2.0 350 QELSALAARHGERLLKTPHNPISL QEL +LA+ HGERLL TPHNPISL QELKSLASAHGERLLHTPHNPISL A:A[gcc] BADN01005542.1 -2093 cgcaacgtgcggatccaccacatcGGTAAGCT Intron 9 aatagtcccagagttaccaactct <1-----[2020 : 1831] ggggcgcaatggagtccatcctag SPP00000631_2.0 374 MSLNHLEAHSSSAVTQLGSMLFTRQVSGAR MSL+ L+A AVTQLGSMLFTRQVSGAR MSLDGLQAGCDKAVTQLGSMLFTRQVSGAR BADN01005542.1 -1833 CAGCCatcggccggtgaggaccgtactaccgtgga -1> tctagtacggaactcatgctttcgatcgcg gtgttcacgtcgagtggccggcctaggacg // Making a R in phase 2 intron Making a G in phase 1 intron Making a G in phase 1 intron Making a Q in phase 2 intron Making a N in phase 2 intron Making a A in phase 1 intron >BADN01005542.1.pep MNSENFTLSEKIVSTSYIRQGCQARRGHEQLIRHLLEQGKCPEEGWSEGTIELFLNELAV MDSNNFLGNCGVGEREGRVASSLVARRHYRLIHGIGRSGDIAAIQPKAAGSSLLNKLTNS IVLDILKLSGVRSVASCFVVPMATGMSLTLCFLTLRHRRPKARYIIWPRIDQKSCFKAMI TAGFEPVVVENVLEGDELRTDLETVEHKIKELGAENILCVHSTTSCFAPRVPDRQLEELA AMCSKYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFD ESFIQEISKMYPGNLSNSLLGLLCLGRASASPSLDVLITLLTLGASGYKKLLSERKEIYS FLAQELKSLASAHGERLLHTPHNPISLAMSLDGLQAGCDKAVTQLGSMLFTRQVSGAR // >BADN01005542.1.[7896:1737].sp ATGAACAGTGAAAACTTCACCCTGAGTGAGAAGATCGTCTCGACCTCCTACATTCGACAG GGCTGCCAGGCGCGCCGCGGCCACGAGCAGCTCATCAGACACTTACTGGAGCAGGGTAAG TGTCCAGAGGAAGGATGGAGTGAGGGTACCATAGAGCTCTTCTTGAATGAGCTGGCTGTG ATGGACAGCAATAACTTCCTCGGCAACTGTGGCGTGGGGGAAAGGGAAGGCCGGGTGGCT TCCAGCCTTGTGGCAAGACGACATTACAGGTTGATCCATGGCATAGGTCGGTCAGGTGAC ATTGCTGCTATTCAACCAAAAGCTGCAGGATCCAGCCTACTGAATAAGCTGACCAACTCC ATCGTGTTGGACATCTTAAAGCTCTCAGGTGTGCGCAGTGTGGCGAGTTGCTTTGTAGTT CCTATGGCAACAGGAATGAGCTTGACTTTGTGCTTTCTGACCCTTCGTCATCGGAGACCC AAGGCTCGCTATATCATTTGGCCTCGCATCGACCAGAAGTCCTGTTTCAAAGCCATGATC ACAGCAGGCTTTGAACCTGTGGTTGTGGAGAATGTACTTGAAGGTGATGAGTTGCGGACA GACTTGGAAACAGTTGAGCACAAAATCAAGGAGCTCGGAGCAGAAAACATCTTGTGTGTT CATTCAACAACATCCTGCTTTGCCCCGCGGGTCCCTGACAGGCAGCTTGAGGAGCTGGCC GCTATGTGTTCCAAATATGACATTCCCCACATAGTTAACAATGCATACGGAGTGCAGTCA TCCAAATGCATGCACCTTATACAACAGGGGGCTCGTGTTGGAAGAATTGATGCCTTTGTA CAGAGCTTGGACAAGAACTTCATGGTTCCAGTAGGTGGCGCCATAATCGCAGGTTTTGAT GAGTCCTTCATCCAGGAGATAAGCAAGATGTATCCAGGCAACTTATCAAACTCACTGCTT GGCCTTCTTTGTCTAGGTCGAGCATCTGCCTCACCTTCCCTTGATGTCCTCATCACCCTT CTCACTCTGGGAGCCAGCGGCTATAAGAAACTCCTGTCAGAAAGAAAGGAGATTTATTCG TTCCTGGCTCAGGAGCTGAAGAGCCTGGCCTCAGCACATGGGGAGAGATTGCTTCACACC CCACATAACCCCATTTCACTGGCCATGTCTCTGGATGGTCTCCAAGCCGGGTGTGACAAG GCAGTGACTCAGCTGGGCTCCATGCTGTTCACCCGTCAAGTGTCGGGAGCCAGG // BADN01005542.1 GeneWise match 7896 1739 688.95 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 7896 7783 0.00 - 0 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 7782 7700 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 7699 7545 0.00 - 0 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 7544 6725 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 6724 6606 0.00 - 1 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 6605 6434 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 6433 6275 0.00 - 2 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 6274 5924 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 5923 5767 0.00 - 2 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 5766 5676 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 5675 5573 0.00 - 1 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 5572 5390 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 5389 5256 0.00 - 0 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 5255 4235 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 4234 4108 0.00 - 1 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 4107 2115 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 2114 2021 0.00 - 0 BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise intron 2020 1831 0.00 - . BADN01005542.1-genewise-prediction-1 BADN01005542.1 GeneWise cds 1830 1739 0.00 - 2 BADN01005542.1-genewise-prediction-1 //