genewise output Score 782.88 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000629_2.0 1 MSVRESFNPESYELDKNFRLTRFTELKGTGCK MSVRESFNPESYELDKNFRLTRF ELKGTGCK MSVRESFNPESYELDKNFRLTRFAELKGTGCK BADN01009667.1 14820 atgagttacgatgcgaatacactggcagagta tctgactacagaataaatgtcgtcatagcgga gggggctccgctggcgccgcatttgcgcaccg SPP00000629_2.0 33 VPQDVLQKLLESLQENHYQEDEQFLG VPQ+VLQKLLE+LQENHYQEDEQFLG VPQEVLQKLLETLQENHYQEDEQFLG BADN01009667.1 14916 GTTGGCT Intron 1 CAGgccggtcaccgaccgactcgggctcg <0-----[14916:15042]-0>tcaattaattactaaaaaaaaaattg gcagtagggaacaggcctagtagcca SPP00000629_2.0 59 AVMPRL IGMDTCVIPLRHGGLSL AVMPRL IGMDTCVIPLRHGGLSL AVMPRL G:G[ggc] IGMDTCVIPLRHGGLSL BADN01009667.1 15121 ggacctGGTAATTA Intron 2 AAGGCagagatgaccacggctc cttcgt <1-----[15140:15792]-1> tgtacgttctgaggtct atgtaa aagcctgctcatactat SPP00000629_2.0 83 VQTTDYIYPIVDDPYMM GRIACANVL VQTTDYIYPIVDDPYMM GRIACANVL VQTTDYIYPIVDDPYMM GRIACANVL BADN01009667.1 15846 gcaagtatcagggctaaGTATGAA Intron 3 TAGgaagtgagc taccaatacttaacatt<0-----[15897:16077]-0>ggtcgcatt cgaatccttagtcccgg aatttctta SPP00000629_2.0 109 SDLYAMGVTECDNMLMLLGVSNKLTEK SDLYAMGVTECDNMLMLLGVSNK++EK SDLYAMGVTECDNMLMLLGVSNKMSEK BADN01009667.1 16105 agctgaggagtgaataccggaaaatgaGTAAGAG Intron 4 gatactgtcagaatttttgtgaatcaa<0-----[16186:17121] tcgtcgagagtccgggcgacccagagg SPP00000629_2.0 136 ERDKVMPLVIQGFKDASEEAGTSVTGGQTVINPWIVLGGVATTVCQ ERDKVMPL+IQGFKDASEEAGTSVTGGQTV+NPW+V+GGVATTVCQ ERDKVMPLIIQGFKDASEEAGTSVTGGQTVLNPWVVMGGVATTVCQ BADN01009667.1 17119 CAGgagagaccaacgtaggtggggatgaggcagcactggaggggaagtc -0>agaattctttagtaaccaacgcctcggacttacgtttggtccctga gacacgagccgacgtaaagacatagaagagcccgggggataaaccg SPP00000629_2.0 182 PNEFI PDNAVPGDVLVLTKPLGT PNEFI PDNAVPGDVLVLTKPLGT PNEFI M:M[atg] PDNAVPGDVLVLTKPLGT BADN01009667.1 17260 cagtaATGTAGGAA Intron 5 CAGGcgaggcgggtgtaactga caatt <2-----[17277:17404]-2> caactcgattttcactgc ccatc actagaacggggcgaaga SPP00000629_2.0 206 QVAVAVHQWLDI PEKWNKIKLVVTQE QVAVAVHQWLDI PEKWNKIKLVVTQE QVAVAVHQWLDI PEKWNKIKLVVTQE BADN01009667.1 17460 cgggggcctcgaGTAAGTT Intron 6 CAGcgataaaatggacg atctctaagtat<0-----[17496:17618]-0>caagaatatttcaa agttgatggatt tgggcgcgagacaa SPP00000629_2.0 232 DVELAYQEAMLNMARLNRT AGLM DVELAY EAM+NMARLNRT AGLM DVELAYHEAMMNMARLNRT A:A[gcg] AGLM BADN01009667.1 17661 gggcgtcggaaaagccaaaGGTAAAAG Intron 7 TAGCGggca atatcaaacttatcgtagc <1-----[17719:18370]-1> cgtt taattctaaggcgtgccga ttcg SPP00000629_2.0 256 HTFNAHAATDITGFGILGHAQNLARQQRTEVSFVIHNLPVLAKMAAVSK HTFNAHAATDITGFGILGHAQ LARQQR+EVSFVIHNLPVLAKMAAVSK HTFNAHAATDITGFGILGHAQTLARQQRSEVSFVIHNLPVLAKMAAVSK BADN01009667.1 18385 catagcggagaagtgacgcgcatgccccaggttgacaccgcgaagggta actacacccatcgtgttgacactcgaaggatctttaatcttcatcctca cccctcacctcagtcctcctgtgaaagacagatcccccagtcggtagcg SPP00000629_2.0 305 ACGNMFGLMHGTCPETS GLLICL ACGNMFGLMHGTCPETS GLLICL ACGNMFGLMHGTCPETS G:G[ggg] GLLICL BADN01009667.1 18532 gtgaatgcacgatcgatGGTGTGTG Intron 8 CAGGGgccatc cggattgttagcgcacc <1-----[18584:18872]-1> gtttgt ctgtgtacgcccctaaa cgtctg SPP00000629_2.0 329 PREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAP PREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAP PREQAARFCAEIKSPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAP BADN01009667.1 18893 ccgcggcttggaatcatgggccgtaagaggagacagcaagaccaagggc cgaaccgtgcataccaagagaacgttgttaagagccgttaacgttatcc tgggtccctagcacggtcgccgagcagtagaaccttcctcaagcaggaa SPP00000629_2.0 378 QVATQNVNTTPGATS Q ATQNVN TPGATS QAATQNVNPTPGATS BADN01009667.1 19040 cggacagacacggat acccaatacccgccc atccgtccatttatt // Making a G in phase 1 intron Making a M in phase 2 intron Making a A in phase 1 intron Making a G in phase 1 intron >BADN01009667.1.pep MSVRESFNPESYELDKNFRLTRFAELKGTGCKVPQEVLQKLLETLQENHYQEDEQFLGAV MPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGRIACANVLSDLYAMGVTECD NMLMLLGVSNKMSEKERDKVMPLIIQGFKDASEEAGTSVTGGQTVLNPWVVMGGVATTVC QPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKIKLVVTQEDVELAYHEA MMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQTLARQQRSEVSFVIHNLPVLAKMA AVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEKG NRTARIIDKPRIIEVAPQAATQNVNPTPGATS // >BADN01009667.1.[14820:19084].sp ATGTCGGTGAGGGAGTCCTTTAACCCCGAGAGCTATGAGCTGGACAAGAACTTCAGGCTC ACACGTTTTGCTGAGCTCAAGGGCACAGGCTGCAAGGTGCCCCAAGAGGTTTTACAGAAG CTGCTAGAAACCCTACAGGAGAACCACTATCAAGAGGATGAACAGTTCCTCGGAGCAGTT ATGCCTCGATTAGGCATAGGAATGGACACCTGTGTGATCCCTCTCAGACATGGAGGCCTT TCACTTGTCCAGACAACAGATTACATCTATCCTATAGTGGATGACCCCTACATGATGGGA AGAATTGCTTGTGCCAATGTTCTAAGTGACCTGTATGCCATGGGAGTGACAGAGTGTGAC AACATGTTGATGCTCCTGGGAGTCAGCAACAAAATGTCAGAGAAGGAGAGAGACAAAGTC ATGCCACTGATCATCCAGGGATTCAAGGATGCATCAGAAGAGGCAGGCACATCTGTAACG GGAGGACAGACAGTGCTCAACCCCTGGGTGGTGATGGGGGGAGTTGCAACAACAGTCTGC CAGCCCAACGAATTTATCATGCCAGACAATGCAGTGCCAGGAGACGTGTTGGTGTTGACC AAGCCATTAGGGACACAAGTGGCTGTTGCGGTACATCAGTGGCTAGATATTCCTGAGAAG TGGAACAAGATCAAGTTAGTGGTAACCCAAGAAGATGTAGAACTTGCTTACCATGAAGCA ATGATGAACATGGCTCGGCTCAACAGGACAGCGGCTGGTCTCATGCACACCTTCAACGCT CACGCAGCCACCGATATCACAGGGTTTGGCATCCTTGGCCACGCTCAGACTTTGGCACGA CAACAGCGAAGCGAAGTGTCATTTGTCATCCACAACCTCCCAGTGCTTGCCAAGATGGCT GCAGTGTCCAAGGCCTGTGGGAATATGTTTGGACTCATGCACGGCACCTGCCCTGAAACA TCAGGGGGCCTGCTTATCTGTCTGCCTCGGGAGCAGGCTGCCCGCTTCTGTGCAGAGATC AAATCCCCGAAGTATGGCGAGGGCCACCAGGCATGGATCATAGGGATTGTAGAGAAAGGA AACCGCACTGCTCGCATCATTGACAAACCACGGATCATAGAGGTGGCACCACAAGCTGCC ACCCAGAATGTCAACCCAACTCCTGGTGCAACTTCT // BADN01009667.1 GeneWise match 14820 19084 782.88 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 14820 14915 0.00 + 0 BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise intron 14916 15042 0.00 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 15043 15139 0.00 + 0 BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise intron 15140 15792 0.00 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 15793 15896 0.00 + 2 BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise intron 15897 16077 0.00 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 16078 16185 0.00 + 0 BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise intron 16186 17121 0.00 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 17122 17276 0.00 + 0 BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise intron 17277 17404 0.00 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 17405 17495 0.00 + 1 BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise intron 17496 17618 0.00 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 17619 17718 0.00 + 0 BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise intron 17719 18370 0.00 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 18371 18583 0.00 + 2 BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise intron 18584 18872 0.00 + . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 18873 19084 0.00 + 2 BADN01009667.1-genewise-prediction-1 // genewise output Score 17.50 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000629_2.0 35 QDVLQKLLESLQEN QDV+ K L QEN QDVIDKFLRVRQEN BADN01009667.1 -1700 cggagattagacga aattaattgtgaaa gtttcgtggagaac // >BADN01009667.1.pep QDVIDKFLRVRQEN // >BADN01009667.1.[1700:1657].sp CAGGATGTTATTGACAAGTTTTTGAGGGTAAGGCAAGAAAAC // BADN01009667.1 GeneWise match 1700 1659 17.50 - . BADN01009667.1-genewise-prediction-1 BADN01009667.1 GeneWise cds 1700 1659 0.00 - 0 BADN01009667.1-genewise-prediction-1 //