genewise output
Score 62.88 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000665_2.0  270 DPNPQVDVEELNRQYMERSEELYDSLMECHWLPMDTITSDISMMN     
                     +P P+ DV++ N+ +M+RSEE YD++M CHW P+D++ S I  ++     
                     EPIPECDVDQWNKDFMQRSEEFYDAMMNCHWEPLDSVNSPIPSLS     
BADN01039778.1   475 gcacgtgggctaagtaccaggttggaaatctgccgtgatcactct     
                     actcagataagaaattaggaataacttagagactactacctcctc     
                     gcctatcgcggcattgaccggccccggctcggcgcttcctccact     


//
>BADN01039778.1.pep
EPIPECDVDQWNKDFMQRSEEFYDAMMNCHWEPLDSVNSPIPSLS
//
>BADN01039778.1.[475:609].sp
GAGCCCATCCCTGAATGTGACGTGGACCAGTGGAACAAAGATTTTATGCAACGCAGCGAG
GAGTTCTACGACGCCATGATGAACTGTCACTGGGAGCCCCTGGACTCTGTTAACTCCCCT
ATCCCCTCACTCTCT
//
BADN01039778.1	GeneWise	match	475	609	62.88	+	.	BADN01039778.1-genewise-prediction-1
BADN01039778.1	GeneWise	cds	475	609	0.00	+	0	BADN01039778.1-genewise-prediction-1
//

genewise output
Score 21.59 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000665_2.0  228 YAAPPPMMGPPPPMGMPPMPPDMQG                         
                     +  PP ++ PP P+ + P P   +G                         
                     FCLPPLLLHPPLPLSLSPAPLPARG                         
BADN01039778.1 -3893 ttcccccccccccctcacgcccgcg                         
                     tgtcctttacctctctgccctccgg                         
                     tttttctctggctctctgatcgtgt                         


//
>BADN01039778.1.pep
FCLPPLLLHPPLPLSLSPAPLPARG
//
>BADN01039778.1.[3893:3817].sp
TTTTGTCTTCCTCCTCTCCTTCTCCATCCGCCGCTCCCTCTCTCTCTCAGTCCGGCACCT
CTCCCGGCTCGGGGT
//
BADN01039778.1	GeneWise	match	3893	3819	21.59	-	.	BADN01039778.1-genewise-prediction-1
BADN01039778.1	GeneWise	cds	3893	3819	0.00	-	0	BADN01039778.1-genewise-prediction-1
//