genewise output Score 324.77 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000665_2.0 13 LDPYMDENFIKQAFSTMGETAFGVKIITHRVT LDPYMDENFIKQAFS MGE+ FGVKIITHR+T LDPYMDENFIKQAFSAMGESPFGVKIITHRIT BADN01039777.1 15114 tgctaggataacgtagaggtctggaaaacaaa tacataaattaactgctgacctgtattcagtc gcacgtgcccggctctgcaagtacgcctcgaa SPP00000665_2.0 45 GSAGYCFVEMADEASVDRCVQRL GSAGYCFVE+ADEASVDRCVQRL G:G[ggg] GSAGYCFVELADEASVDRCVQRL BADN01039777.1 15210 GGGTAGGAT Intron 1 CAGGgtggtttggcggggaggctgcac <2-----[15212:15698]-2> gccgagttatcaacgtaggtagt taaacctggggtaatccctcaac SPP00000665_2.0 69 NGKLVPGSNP PRKFKLNYATYGKRPE NGKLVPGSNP PRKFKLNYATYGKRPE NGKLVPGSNP PRKFKLNYATYGKRPE BADN01039777.1 15769 agacgcgtacGTCAGTT Intron 2 CAGccatacatgatgaccg agattcgcac<0-----[15799:16694]-0>cgatataaccagagca taagttaacg cggtgactccccagag SPP00000665_2.0 95 P PEFSVFVGDLTSEVDDYQLHQF PEFSVFVGDL SEVDD+QLHQ A G:G[ggg] PEFSVFVGDLASEVDDFQLHQV BADN01039777.1 16743 gGGGTAAGAT Intron 3 CAGGcgttgtgggtgtggggtccccg c <2-----[16748:18217]-2> catctttgatccataatataat a ggcagtgccgctggcccggcgt SPP00000665_2.0 119 FLKKFPSCKGAKVVTDPYGNS GY F KK+PSCKGAKVVTD YG S GY F-KKYPSCKGAKVVTDQYGYS R:R[aga] GY BADN01039777.1 18285 t aatcttaggaggagctgttAGGTACGTC Intron 4 CAGAgt t aaaccgagcattcaaagac <2-----[18347:18827]-2> ga t ggccccgacaactcgtacc cc SPP00000665_2.0 143 GFVKFSDENEQKKALEEFQNASGLGGKPIRISIAVNK GFVKF +E+EQKKA+EE Q LGGKP+R+SIAV K GFVKFGEESEQKKAIEECQGTM-LGGKPLRLSIAVAK BADN01039777.1 18835 gtgatgggagcaagaggtcgaa cggaccacaaggga gttatgaagaaaactaagagct tggactgtgtctca cttgtaggcgggggcggcgtgg cgtagcactctaag SPP00000665_2.0 180 NKASTYHN-QNNTYNTNYQQQ-- K S YH Q Y++NY Q G:S[agc] QKMSNYHGGQGQNYHSNYNQSQS BADN01039777.1 18943 AGGTAAGAT Intron 5 CAGCcaaaatcggcgcatcaatactct <2-----[18945:19273]-2> aatgaaaggagaaaagaaaacac gggccctgcgcgtctccccgcgc SPP00000665_2.0 201 -YYQQ----PYNSYYPQW-GYDQY-----------------SGYNYGYN YY YY QW GYDQY SGYNY Y SYYGSNSGGGQGGYYSQWGGYDQYGGYNNSGYNSGYNSGYGSGYNYNYG BADN01039777.1 19344 attgaaagggcggtttctggtgctggtaaagtaagtaagtgagtatatg gaaggaggggaggaacagggaaaaggaaaggaaggaaggagggaaaaag tctctcccgtggtcctgggcccgcccccccctccctttacctccccctg SPP00000665_2.0 227 PYAAPPP-MMGPPPPMGMPPMPPDMQGSTE PY PPP + PPPPMGMPP DM G+ E PYGYPPPGHVMPPPPMGMPPT--DMSGAVE BADN01039777.1 19491 ctgtcccgcgaccccagacca gatgggg cagacccgattcccctgtccc atcgcta acaccaactggaatcgggact cgaatag // Making a G in phase 2 intron Making a G in phase 2 intron Making a R in phase 2 intron Making a S in phase 2 intron >BADN01039777.1.pep LDPYMDENFIKQAFSAMGESPFGVKIITHRITGGSAGYCFVELADEASVDRCVQRLNGKL VPGSNPPRKFKLNYATYGKRPEAGPEFSVFVGDLASEVDDFQLHQVFKKYPSCKGAKVVT DQYGYSRGYGFVKFGEESEQKKAIEECQGTMLGGKPLRLSIAVAKSQKMSNYHGGQGQNY HSNYNQSQSSYYGSNSGGGQGGYYSQWGGYDQYGGYNNSGYNSGYNSGYGSGYNYNYGPY GYPPPGHVMPPPPMGMPPTDMSGAVE // >BADN01039777.1.[15114:19574].sp TTGGACCCATACATGGATGAGAACTTCATCAAGCAGGCCTTTAGCGCTATGGGCGAATCA CCGTTTGGAGTCAAGATCATCACTCACAGGATAACAGGGGGTTCAGCAGGATACTGCTTT GTGGAGCTGGCGGATGAAGCAAGTGTCGACCGCTGTGTCCAAAGACTCAATGGAAAACTG GTTCCTGGATCAAACCCGCCCCGGAAGTTTAAGCTAAACTATGCCACCTACGGCAAACGG CCAGAGGCAGGGCCGGAGTTCTCAGTGTTTGTGGGCGACTTGGCCTCTGAGGTGGACGAC TTCCAGCTGCACCAGGTTTTTAAGAAGTACCCCTCCTGCAAGGGAGCCAAAGTAGTCACT GACCAGTATGGATACTCCAGAGGCTACGGCTTTGTTAAGTTTGGAGAGGAGAGCGAGCAG AAGAAGGCGATCGAGGAGTGCCAGGGTACGATGCTCGGGGGTAAACCGCTCAGACTCAGT ATCGCTGTAGCAAAGAGCCAGAAGATGAGCAACTACCATGGGGGCCAGGGCCAGAATTAC CATAGCAACTACAACCAGTCCCAGTCCAGTTACTATGGCAGTAACAGCGGCGGGGGTCAG GGGGGTTACTACTCTCAGTGGGGGGGCTACGACCAGTACGGCGGCTACAACAACAGCGGC TATAACAGCGGCTATAATAGTGGATACGGCAGTGGCTACAACTACAACTATGGGCCATAC GGATACCCCCCACCAGGCCATGTGATGCCACCACCTCCCATGGGGATGCCACCCACTGAC ATGTCAGGAGCTGTAGAG // BADN01039777.1 GeneWise match 15114 19574 346.73 + . BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise cds 15114 15211 0.00 + 0 BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise intron 15212 15698 0.00 + . BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise cds 15699 15798 0.00 + 1 BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise intron 15799 16694 0.00 + . BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise cds 16695 16747 0.00 + 0 BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise intron 16748 18217 0.00 + . BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise cds 18218 18346 0.00 + 1 BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise intron 18347 18827 0.00 + . BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise cds 18828 18944 0.00 + 1 BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise intron 18945 19273 0.00 + . BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise cds 19274 19574 0.00 + 1 BADN01039777.1-genewise-prediction-1 // genewise output Score 18.45 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000665_2.0 186 YHNQNNTYNTNYQQQYYQQPYNS Y +N +Y +Y Y Q P+ S YFTENRSYLLHYLHLYPQSPHGS BADN01039777.1-20026 ttagaattccctccctcctccgt atcaagcattaatatacaccagc tctacgtctgttttattgtttct // >BADN01039777.1.pep YFTENRSYLLHYLHLYPQSPHGS // >BADN01039777.1.[20026:19956].sp TATTTCACTGAAAACAGGTCTTACCTTCTGCATTATCTTCATCTATATCCTCAGTCTCCT CATGGCTCT // BADN01039777.1 GeneWise match 20026 19958 18.45 - . BADN01039777.1-genewise-prediction-1 BADN01039777.1 GeneWise cds 20026 19958 0.00 - 0 BADN01039777.1-genewise-prediction-1 //