genewise output Score 353.00 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info tr|B3DLH0|B3DLH 64 RQLPMYNS-EHRWQQLNPGPGGPYLAYPILSSPQPPVSSDYATYYHAIM RQ PMYN E RWQQ NP PGGPYLAYPILSSPQPPVS+DYA Y+ IM RQHPMYNGGELRWQQPNPSPGGPYLAYPILSSPQPPVSNDYA--YYQIM BADN01061253.1 704 acccatagggcctcccacacggctcgtcatttccccgtagtg ttcaa gaactaaggatggaacacgcggcatcacttcccacctcaaac aaatt aattgttagggcgggtctctttgcgccccgtccgttcctctt ccgtg tr|B3DLH0|B3DLH 112 PTPCPPVMGFYQPFPGPYGGP----LLNPLS-DCSDRPLQPGQT----- PTPCPPVMGFYQPFPG Y GP +NP+S D +RPL G T PTPCPPVMGFYQPFPGTYAGPVQAGVVNPVSADVGERPLPLGPTYGMAS BADN01061253.1 845 cactccgagttcctcgatggcgcggggacgtgggggaccccgcatgaga cccgccttgtaactcgcacgctacgttactccatgagctctgccagtcg ttacatggctcgcctcttagtggtggcctcattctagagtggaatggct tr|B3DLH0|B3DLH 151 PRARSGARTPVLQK QPMVQPIRAKRP R R R VL K + QP R +RP QRGRGMVRPNVLPK LGVCQPPRGRRP BADN01061253.1 992 ccgagagccagccaGTACAGA Intron 1 CAGtggtcccagccc aggggttgcattca<0-----[1034 : 1191]-0>tgtgaccggggc gggacgcatttcag ggtcgtagtcat tr|B3DLH0|B3DLH 177 VMRSVAVQKEVCAAGPDGRSKTVLLVDAAQQT RSVAVQKEVC GPDGR+KTV+LVDAAQQT PTRSVAVQKEVCTMGPDGRTKTVMLVDAAQQT BADN01061253.1 1228 caaagggcaggtaagcggaaaagacggggcca ccggtctaaatgctgcaggcacttttaccaac acgtttgggagccggtttacgacggatatggt tr|B3DLH0|B3DLH 209 FPGEASGGVRCVSDQVSPQQWKN FPGE SG RCV+++ SP WKN D:D[gat] FPGEVSG--RCVAERASPLLWKN BADN01061253.1 1324 GGTAAGAA Intron 2 CAGATtcgggtg ctgggcgaccctaa <1-----[1325 : 1980]-1> tcgatcg ggtcagcgcttgaa tatggag gtgtggttcgaggc tr|B3DLH0|B3DLH 233 KPRRRRTSQQ-ESSSEQGASEADIDSDSGYCSPKHNQGAANPSSSQNTN + +RRR S E+ +EQGASEADIDSDSGYCSPKHNQ A T RTKRRRASHPAENYNEQGASEADIDSDSGYCSPKHNQAAGV------TQ BADN01061253.1 2046 caaaacgtccggatagcggagggagagagttacacacgggg ac gcagggccaccaaaaaagcgacatagaggaggcaaaaccgt ca aagaaagctatacctggcctgatactctcctccaccgaaag aa tr|B3DLH0|B3DLH 281 TAAVDAGIMTA SWGSVSSPGVQK A A T +W +V+S G QK RTAETAAASTV V:C[tgt] TWVNVASQGTQK BADN01061253.1 2175 caggagggtagTGTTGGCT Intron 3 CAGGTatgaggtcgaca gccacccccct <1-----[2209 : 3265]-1> cgtatccagcaa aacgtaaacga cgatactgtcgg tr|B3DLH0|B3DLH 305 PWSDRSTLFHRGS--RTPEQRSYTQ D W DR+ FHR + PEQR+++Q D SWGDRNGQFHRADQRKNPEQRNFSQ D BADN01061253.1 3304 ttggaagctcaggcaaacgcaattcGTGCAGT Intron 4 CAGg cggagagatagcaagaacaagatca<0-----[3379 : 4075]-0>a cggcgccgccaacgggttagaccag t tr|B3DLH0|B3DLH 329 FQMSFVGRV---GGQRRCTPPETPNTHLTPEPLYFQ F + GRV ++R P T LTPEPLYF+ FHSGYPGRVLPNQSEQRLQPAVVTGTELTPEPLYFE BADN01061253.1 4079 tcagtcgcgccactgcacccgggagagcacgccttg taggacggttcaacaagtaccttcgcatccactata cctctagtggctaaaaaagaagctctgccagccctg tr|B3DLH0|B3DLH 362 DEDEFPDLATGSAAQRS-KPE--PA- DE+EFPDLATG AAQRS K E PA DEEEFPDLATGGAAQRSAKSESIPAQ BADN01061253.1 4187 GTGAGAG Intron 5 CAGggggtcgcgaggggccagatgtacgc <0-----[4187 : 4273]-0>aaaatcatccggccaggcacactcca taggcttactggtcacccaaattacg tr|B3DLH0|B3DLH 384 ---QPKLTKSL LDNLPDSSPISIVQT QPKL K+L LDNLP++SPI+IVQT THTQPKLPKNL LDNLPENSPINIVQT BADN01061253.1 4352 acaccaccaacGTAAGAG Intron 6 CAGcgaccgatcaaagca cacacatcaat<0-----[4385 : 4481]-0>taatcaacctattac gtgacaccacg gtcaaaccccctgga tr|B3DLH0|B3DLH 407 PIPITSSVPKRA PIPIT+SVPKRA PIPITTSVPKRA BADN01061253.1 4527 cacaaatgcaag ctctccctcagc ccttccttcagc // Making a D in phase 1 intron Making a C in phase 1 intron >BADN01061253.1.pep RQHPMYNGGELRWQQPNPSPGGPYLAYPILSSPQPPVSNDYAYYQIMPTPCPPVMGFYQP FPGTYAGPVQAGVVNPVSADVGERPLPLGPTYGMASQRGRGMVRPNVLPKLGVCQPPRGR RPPTRSVAVQKEVCTMGPDGRTKTVMLVDAAQQTDFPGEVSGRCVAERASPLLWKNRTKR RRASHPAENYNEQGASEADIDSDSGYCSPKHNQAAGVTQRTAETAAASTVCTWVNVASQG TQKSWGDRNGQFHRADQRKNPEQRNFSQDFHSGYPGRVLPNQSEQRLQPAVVTGTELTPE PLYFEDEEEFPDLATGGAAQRSAKSESIPAQTHTQPKLPKNLLDNLPENSPINIVQTPIP ITTSVPKRA // >BADN01061253.1.[704:4562].sp AGACAACATCCTATGTATAATGGAGGGGAGCTGCGCTGGCAGCAGCCTAACCCTAGCCCT GGTGGTCCGTACCTGGCCTACCCCATCTTGTCTTCCCCCCAGCCTCCTGTCTCCAATGAC TATGCTTACTACCAGATTATGCCTACTCCATGCCCACCTGTGATGGGCTTTTACCAGCCC TTCCCTGGCACTTATGCAGGGCCTGTGCAGGCTGGGGTGGTCAACCCTGTCTCAGCTGAT GTCGGTGAAAGGCCACTGCCTCTGGGGCCAACATATGGGATGGCCAGTCAGCGGGGGAGA GGCATGGTCCGACCTAATGTTCTCCCAAAGTTGGGGGTTTGCCAGCCTCCAAGGGGTCGC CGACCTCCAACCAGGAGTGTTGCTGTGCAGAAGGAAGTGTGCACCATGGGGCCTGATGGT AGAACCAAGACAGTCATGCTGGTAGATGCAGCTCAGCAGACTGATTTTCCAGGTGAGGTG TCAGGGCGGTGTGTGGCTGAGCGGGCTAGTCCCCTGCTATGGAAGAACCGAACAAAGAGA AGACGAGCGTCCCATCCAGCTGAAAACTACAATGAGCAGGGCGCCAGTGAGGCAGATATA GACAGTGACAGTGGCTACTGTAGCCCCAAACACAACCAGGCAGCAGGAGTGACACAACGA ACAGCCGAGACTGCAGCAGCATCCACGGTATGTACCTGGGTAAATGTAGCCTCTCAGGGT ACCCAGAAGTCCTGGGGGGACAGGAACGGCCAGTTCCACAGAGCAGACCAGAGGAAGAAT CCTGAACAGAGAAACTTCTCACAGGATTTCCACAGTGGCTATCCAGGGCGTGTGCTGCCC AATCAATCAGAACAAAGACTACAGCCAGCAGTGGTCACTGGCACTGAGCTCACCCCAGAG CCCCTCTACTTTGAGGATGAAGAGGAGTTCCCTGATCTAGCCACTGGGGGGGCTGCCCAA CGCAGCGCCAAATCAGAATCTATTCCAGCCCAGACGCATACGCAACCCAAACTCCCCAAA AACCTGCTGGATAACCTACCAGAAAACTCCCCCATCAACATTGTGCAGACACCCATCCCT ATTACCACCTCTGTTCCCAAAAGGGCC // BADN01061253.1 GeneWise match 704 4562 373.97 + . BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise cds 704 1033 0.00 + 0 BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise intron 1034 1191 0.00 + . BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise cds 1192 1324 0.00 + 0 BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise intron 1325 1980 0.00 + . BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise cds 1981 2208 0.00 + 2 BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise intron 2209 3265 0.00 + . BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise cds 3266 3378 0.00 + 2 BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise intron 3379 4075 0.00 + . BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise cds 4076 4186 0.00 + 0 BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise intron 4187 4273 0.00 + . BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise cds 4274 4384 0.00 + 0 BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise intron 4385 4481 0.00 + . BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise cds 4482 4562 0.00 + 0 BADN01061253.1-genewise-prediction-1 // genewise output Score 16.85 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info tr|B3DLH0|B3DLH 46 PSYLITCY PSY + CY PSYFLACY BADN01061253.1 -2439 ctttcgtt ccattcga tcccgtct // >BADN01061253.1.pep PSYFLACY // >BADN01061253.1.[2439:2414].sp CCTTCCTACTTCCTGGCTTGCTAT // BADN01061253.1 GeneWise match 2439 2416 16.85 - . BADN01061253.1-genewise-prediction-1 BADN01061253.1 GeneWise cds 2439 2416 0.00 - 0 BADN01061253.1-genewise-prediction-1 //