genewise output Score 252.96 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000617_2.0 28 QACNSAAGDSFHNYGAKTINGTQFIPFSHYAGKHVLVVNVATYXGLTFQ Q C+++ ++H Y AKT+NG+ + FS Y GK VL VN ATYXGLT+Q QHCDASIDGTIHKYNAKTLNGSNTVNFSDYIGKSVLFVNTATYXGLTLQ BADN01020040.1 1755 cctggtaggaacatagaacagaaagatagtagaagctgaagattgcacc aagacctagctaaaacactaggactatgaatgagttttacccaggtcta gctctcatccacgttagcacgtctacctcccagtcccctgtacaaccag SPP00000617_2.0 77 YV LNALHEELRHLGFTILGFPCD YV LNALH+E++ G+T+LGFPC+ YV E:E[gaa] LNALHDEMKPFGLTVLGFPCN BADN01020040.1 1902 tgGGTAAGAA Intron 1 CAGAAcagccggaactgcagcgtcta at <1-----[1909 : 1992]-1> tactaaatactgtcttgtcga tg gtaaccggaatattttctacc SPP00000617_2.0 101 QFGKQEPGENNEILSAL YVRPGN QFGKQEPG+ +EIL L +VRPGN QFGKQEPGQRHEILPGL K:K[aaa] HVRPGN BADN01020040.1 2058 ctgacgcgcacgaccgtAAGTGAGAA Intron 2 CAGAcgacga atgaaacgagaattcgt <2-----[2111 : 2626]-2> atgcga gtgagaaggatatgata tcaact SPP00000617_2.0 125 GFVPNFQLFEKGDVNGDGEQALFTFLK G+VPNF LFEKGDVNG EQ +FTFLK GYVPNFLLFEKGDVNGKNEQEVFTFLK BADN01020040.1 2646 gtgcatcctgagggagaagcggtatcaGTAAGTT Intron 3 gatcattttaagatagaaaaattctta<0-----[2727 : 3314] atcaccggtgattgtaatgggtctctg SPP00000617_2.0 152 NACPPVGESFGATSNRLFWEPLKVNDIKWNFEKFLLDPDGRPVMRW +CPPVG+SF S+RLFWEPLK+NDIKWNFEKFL+ PDG+P+MRW KSCPPVGDSFNNPSDRLFWEPLKLNDIKWNFEKFLVGPDGKPLMRW BADN01020040.1 3312 CAGattccgggataacagatttgccacagaatatgatcggcggactaat -0>acgcctgagtaacgagttgactataatagataatttgcagacttgg acctgtaccctccctagcggttgccccggctagcgggtcggagggg SPP00000617_2.0 198 FPRVNVSEVRADILKYFHQL P V+VS VRADI K++ Q+ HPSVSVSVVRADIRKHLLQM BADN01020040.1 3453 ccagagtggcggacacccca acgtgtcttgcatgaattat cacctcaacatttcacgcag // Making a E in phase 1 intron Making a K in phase 2 intron >BADN01020040.1.pep QHCDASIDGTIHKYNAKTLNGSNTVNFSDYIGKSVLFVNTATYXGLTLQYVELNALHDEM KPFGLTVLGFPCNQFGKQEPGQRHEILPGLKHVRPGNGYVPNFLLFEKGDVNGKNEQEVF TFLKKSCPPVGDSFNNPSDRLFWEPLKLNDIKWNFEKFLVGPDGKPLMRWHPSVSVSVVR ADIRKHLLQM // >BADN01020040.1.[1755:3512].sp CAGCACTGTGACGCTTCCATAGATGGCACCATACACAAGTATAATGCAAAGACCCTAAAC GGGAGTAACACTGTAAACTTCAGTGACTACATCGGAAAGAGTGTCCTCTTCGTCAATACG GCTACATACTGAGGACTCACCCTACAGTATGTGGAACTGAATGCACTACACGACGAGATG AAACCATTTGGACTTACTGTTCTTGGCTTTCCATGCAACCAGTTTGGGAAACAGGAACCA GGGCAGAGACATGAAATTCTGCCAGGTTTAAAACATGTCAGACCAGGCAATGGATATGTC CCAAACTTCCTGCTGTTTGAGAAAGGTGATGTGAATGGAAAAAATGAGCAGGAGGTTTTC ACTTTCCTTAAGAAATCCTGCCCTCCGGTTGGAGACAGCTTCAATAACCCCAGCGATAGA TTGTTCTGGGAGCCTCTTAAGCTCAACGACATCAAGTGGAACTTTGAAAAGTTCCTGGTG GGGCCTGACGGGAAGCCATTGATGAGGTGGCACCCAAGCGTCAGTGTCTCAGTAGTCCGA GCTGATATTCGCAAACACCTGCTCCAAATG // BADN01020040.1 GeneWise match 1755 3512 252.96 + . BADN01020040.1-genewise-prediction-1 BADN01020040.1 GeneWise cds 1755 1908 0.00 + 0 BADN01020040.1-genewise-prediction-1 BADN01020040.1 GeneWise intron 1909 1992 0.00 + . BADN01020040.1-genewise-prediction-1 BADN01020040.1 GeneWise cds 1993 2110 0.00 + 2 BADN01020040.1-genewise-prediction-1 BADN01020040.1 GeneWise intron 2111 2626 0.00 + . BADN01020040.1-genewise-prediction-1 BADN01020040.1 GeneWise cds 2627 2726 0.00 + 1 BADN01020040.1-genewise-prediction-1 BADN01020040.1 GeneWise intron 2727 3314 0.00 + . BADN01020040.1-genewise-prediction-1 BADN01020040.1 GeneWise cds 3315 3512 0.00 + 0 BADN01020040.1-genewise-prediction-1 // genewise output Score 14.81 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000617_2.0 168 LFWEPLKVNDIK LF PL V DIK LFKVPLDVADIK BADN01020040.1 -7244 ctagccggggaa ttatctatcata tcatattttttg // >BADN01020040.1.pep LFKVPLDVADIK // >BADN01020040.1.[7244:7207].sp CTTTTCAAAGTTCCACTTGATGTTGCTGATATTAAG // BADN01020040.1 GeneWise match 7244 7209 14.81 - . BADN01020040.1-genewise-prediction-1 BADN01020040.1 GeneWise cds 7244 7209 0.00 - 0 BADN01020040.1-genewise-prediction-1 //