genewise output
Score 192.74 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002313_2.0    1 MSFCSFFGGEVFQNHFEP                          VYVCA 
                     MSFCSFFG EVF+NHFEP                          VYVCA 
                     MSFCSFFGDEVFRNHFEP          G:G[ggt]        VYVCA 
KE760349.1      9734 atttattggggtcactgcGGTACTAT  Intron 1   CAGGTgtgtg 
                     tctggttgaattgaatac <1-----[9789 :11526]-1>  tatgc 
                     ggcccccgcgtcgcctgg                          ctgcc 


SPP00002313_2.0   25 KCGYELFSSCSKYAHSSPWPAFTETIHADSVAKRPDHNQSEALK      
                     KCGYELFSS SKYAHSSPWPAFTETIHADSVAK P+HN+ EALK      
                     KCGYELFSSYSKYAHSSPWPAFTETIHADSVAKCPEHNRPEALK      
KE760349.1     11544 atgtgcttattatgcttctcgtagaacggaggatcgcaccggta      
                     aggaattcgacaacacccgcctcactacagtcagcaaagcacta      
                     gtctgcccccagtatgtagatccgccttctgcgtagctgtacag      


SPP00002313_2.0   69                        VSCGRCGNGLGHEFLNDGPKRGQSRF 
                                            VSCG+CGNGLGHEFLN+GPK+GQSRF 
                                            VSCGKCGNGLGHEFLNNGPKQGQSRF 
KE760349.1     11676 GTGGGGG  Intron 2   TAGgttgatgagtgcgtcaagcacgctct 
                     <0-----[11676:11990]-0>tcggaggagtgaattaagcaagacgt 
                                            ccccgtcttactgcgcccaggggtcc 


SPP00002313_2.0   95 XIFSSSLKFVPKGELAI                                 
                     XIFSSSLKFVPK ELAI                                 
                     XIFSSSLKFVPKSELAI                                 
KE760349.1     12069 tataatcatgcaagcga                                 
                     gttggctattcagatct                                 
                     aacctaggtctatgtcc                                 


//
Making a G in phase 1 intron
>KE760349.1.pep
MSFCSFFGDEVFRNHFEPGVYVCAKCGYELFSSYSKYAHSSPWPAFTETIHADSVAKCPE
HNRPEALKVSCGKCGNGLGHEFLNNGPKQGQSRFXIFSSSLKFVPKSELAI
//
>KE760349.1.[9734:12119].sp
ATGTCGTTCTGCAGCTTCTTCGGGGACGAGGTTTTCCGGAACCACTTTGAGCCGGGTGTC
TATGTGTGCGCCAAGTGTGGCTATGAGCTCTTCTCCAGCTACTCAAAGTATGCACATTCG
TCTCCATGGCCAGCTTTCACCGAGACCATCCATGCTGACAGTGTGGCCAAGTGTCCAGAG
CACAATCGGCCTGAAGCCTTAAAGGTCTCCTGCGGCAAGTGTGGCAATGGTTTAGGCCAT
GAGTTCCTGAACAACGGCCCAAAGCAGGGGCAGTCTCGCTTCTGAATATTCAGCAGTTCA
CTGAAGTTTGTCCCTAAAAGTGAGCTTGCCATC
//
KE760349.1	GeneWise	match	9734	12119	192.74	+	.	KE760349.1-genewise-prediction-1
KE760349.1	GeneWise	cds	9734	9788	0.00	+	0	KE760349.1-genewise-prediction-1
KE760349.1	GeneWise	intron	9789	11526	0.00	+	.	KE760349.1-genewise-prediction-1
KE760349.1	GeneWise	cds	11527	11675	0.00	+	2	KE760349.1-genewise-prediction-1
KE760349.1	GeneWise	intron	11676	11990	0.00	+	.	KE760349.1-genewise-prediction-1
KE760349.1	GeneWise	cds	11991	12119	0.00	+	0	KE760349.1-genewise-prediction-1
//

genewise output
Score 14.71 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00002313_2.0   39 HSSPWPAFTETI                                      
                     H SP P+F + +                                      
                     HGSPVPSFNKEV                                      
KE760349.1    -15845 cgtcgcttaagg                                      
                     agcctcctaaat                                      
                     tcttgcgccgaa                                      


//
>KE760349.1.pep
HGSPVPSFNKEV
//
>KE760349.1.[15845:15808].sp
CATGGCTCTCCTGTGCCCTCGTTCAACAAGGAAGTA
//
KE760349.1	GeneWise	match	15845	15810	14.71	-	.	KE760349.1-genewise-prediction-1
KE760349.1	GeneWise	cds	15845	15810	0.00	-	0	KE760349.1-genewise-prediction-1
//