
genewise output
Score 291.99 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000036_2.0   81 ELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGL           
                     EL+ LQEELKP+GLVVLGFPCNQFGKQEPG+N EILPGL           
                     ELSTLQEELKPFGLVVLGFPCNQFGKQEPGENLEILPGL           
KE755429.1       578 gcaaccggcactgcggtgtctactgacgcggatgaccgc           
                     atgctaaatactgttttgtcgaatgaaacgaatattcgt           
                     agcataggggatcatgggtcccatagaaaaacggctagg           


SPP00000036_2.0  120                           YVRPGGGFVPSFQLFEKGDVNGE 
                                               YVRPGGG+VP+FQLFEKGDVNGE 
                                K:K[aag]       YVRPGGGYVPNFQLFEKGDVNGE 
KE755429.1       695 AAGTAAGTG  Intron 1   CAGGtgccgggtgcatcctgagggagg 
                       <2-----[697  : 1160]-2> atgcgggatcatattaagataga 
                                               tctagaacattcgttgagtgtta 


SPP00000036_2.0  144 KEQKVFSFLK                       HSCPHPSEILGTFKSI 
                     KEQKV++FLK                       HSCPHPSE+LG+FK I 
                     KEQKVYTFLK                       HSCPHPSELLGSFKHI 
KE755429.1      1231 agcagtattaGTGAGTG  Intron 2   CAGcttccctgctgttaca 
                     aaaatactta<0-----[1261 : 2368]-0>acgcaccattgctaat 
                     aagaccctgg                       ccttcctgtgctcatc 


SPP00000036_2.0  170 SWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQF 
                     SW+PVKVHD+RWNFEKFLVGPDG+PVMRWSH A V++VK+DIL YLKQF 
                     SWEPVKVHDVRWNFEKFLVGPDGVPVMRWSHWAPVNTVKSDILEYLKQF 
KE755429.1      2417 ttgcgagcggctatgatcggcgggcgacttctgcgaagatgacgtcact 
                     cgactataatggataatttgcagtcttggcagcctactacattaataat 
                     cggcagctttcgttagcgggttactcgtgctgtactatgatcggcggac 


SPP00000036_2.0  219 KTK                                               
                     KTK                                               
                     KTK                                               
KE755429.1      2564 aaa                                               
                     aca                                               
                     ata                                               


//
Making a K in phase 2 intron
>KE755429.1.pep
ELSTLQEELKPFGLVVLGFPCNQFGKQEPGENLEILPGLKYVRPGGGYVPNFQLFEKGDV
NGEKEQKVYTFLKHSCPHPSELLGSFKHISWEPVKVHDVRWNFEKFLVGPDGVPVMRWSH
WAPVNTVKSDILEYLKQFKTK
//
>KE755429.1.[578:2572].sp
GAACTGAGCACACTTCAAGAGGAGCTGAAGCCATTTGGCCTAGTTGTGTTGGGGTTTCCC
TGCAACCAATTTGGAAAGCAAGAACCAGGAGAAAACTTGGAGATCCTTCCAGGGCTGAAG
TATGTCCGTCCAGGGGGAGGATACGTACCTAATTTCCAGCTTTTTGAGAAAGGGGATGTG
AATGGTGAAAAAGAACAGAAAGTCTACACCTTTTTGAAGCACTCCTGTCCTCACCCCTCT
GAGCTTTTGGGCTCTTTCAAACATATCTCCTGGGAGCCCGTAAAGGTCCATGATGTTCGC
TGGAATTTTGAAAAGTTCCTGGTGGGGCCTGATGGAGTCCCTGTCATGCGTTGGTCCCAT
TGGGCTCCAGTCAATACAGTTAAGTCAGATATCCTGGAGTACCTGAAGCAATTCAAAACT
AAA
//
KE755429.1	GeneWise	match	578	2572	291.99	+	.	KE755429.1-genewise-prediction-1
KE755429.1	GeneWise	cds	578	696	0.00	+	0	KE755429.1-genewise-prediction-1
KE755429.1	GeneWise	intron	697	1160	0.00	+	.	KE755429.1-genewise-prediction-1
KE755429.1	GeneWise	cds	1161	1260	0.00	+	1	KE755429.1-genewise-prediction-1
KE755429.1	GeneWise	intron	1261	2368	0.00	+	.	KE755429.1-genewise-prediction-1
KE755429.1	GeneWise	cds	2369	2572	0.00	+	0	KE755429.1-genewise-prediction-1
//

genewise output
Score 15.94 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000036_2.0    5 LRVVHLLPL--LLACF                                  
                     L ++H++PL   L CF                                  
                     LSILHIIPLPPVLHCF                                  
KE755429.1     -7940 taatcaaccccgcctt                                  
                     tgttattctccttagt                                  
                     gctgttcattttctcc                                  


//
>KE755429.1.pep
LSILHIIPLPPVLHCF
//
>KE755429.1.[7940:7891].sp
TTGAGCATTTTGCATATTATCCCACTTCCTCCTGTTCTCCATTGCTTC
//
KE755429.1	GeneWise	match	7940	7893	16.93	-	.	KE755429.1-genewise-prediction-1
KE755429.1	GeneWise	cds	7940	7893	0.00	-	0	KE755429.1-genewise-prediction-1
//
