
genewise output
Score 613.00 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000850_2.0    1 MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
                     MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
                     MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRG 
KK949927.1:subs 1000 agacaggtcaaccaccgtttatctcgctgtgaccacggcctactatacg 
                     tgttgtatttctattctttcagtttctaacttttaatttttggcaccgg 
                     gccccacggcagatggttccccccgactcgctccgcgggggcccgctcg 


SPP00000850_2.0   50 EWRRMLTSEGMRCIWKSFLLDAYKQ                       V 
                     EWRRMLTSEGMRCIWKSFLLDAYKQ                       V 
                     EWRRMLTSEGMRCIWKSFLLDAYKQ                       V 
KK949927.1:subs 1147 gtacacatggactataatccggtacGTGAGCT  Intron 1   TAGg 
                     agggttccagtggtgagtttacaaa<0-----[1222 : 8987]-0>t 
                     gggcggcagagcccggcccctccag                       g 


SPP00000850_2.0   76 KLGEDAPNSSVVHVSNPDRGDNRGNGAQGKTVDGTECHLLDFASSERPL 
                     KLGEDAPNSSVVHVSNPDRGDNRGNGAQGKTVDGTECHLLDFASSERPL 
                     KLGEDAPNSSVVHVSNPDRGDNRGNGAQGKTVDGTECHLLDFASSERPL 
KK949927.1:subs 8991 atggggcataggcgtacgaggaagaggcgaagggagtcccgtgatgccc 
                     atgaaccacgttatcacaggaaggagcagactagcagattatcgcagct 
                     agtatcttctggtcctatatccaattcgggattatgctttctcctgcag 


SPP00000850_2.0  125 VVNFGSATXPPFISQLPAFSKLVEEFSSVADFLLVYIDEAHPSDGWAVP 
                     VVNFGSATXPPFISQLPAFSKLVEEFSSVADFLLVYIDEAHPSDGWAVP 
                     VVNFGSATXPPFISQLPAFSKLVEEFSSVADFLLVYIDEAHPSDGWAVP 
KK949927.1:subs 9138 ggatgtgatcctaacccgtaacgggtttgggtctgtagggcctggtggc 
                     ttatgcccgccttgatcctgattaatcctcattttataacaccaggctc 
                     gcctcactattttcggacccaggagcaagtccggccttgtttattgggt 


SPP00000850_2.0  174 GDSSLSFEVKKHQNQEDRCAAAHQLLERFSLPPQCRVVADRMDNNANVA 
                     GDSSLSFEVKKHQNQEDRCAAAHQLLERFSLPPQCRVVADRMDNNANVA 
                     GDSSLSFEVKKHQNQEDRCAAAHQLLERFSLPPQCRVVADRMDNNANVA 
KK949927.1:subs 9285 ggtttttggaaccacggctgggccccgctttccctcggggcagaagagg 
                     gacctctataaaaaaaaggcccaattagtctccaggttcagtaaacatc 
                     gcttgttggggcgcgacattaccgtggtccggcgcatgtctgcttctat 


SPP00000850_2.0  223 YGVAFERVCIVQRQKIAYLGGKGPFYYNLQEVRRWLEKNFSER       
                     YGVAFERVCIVQRQKIAYLGGKGPFYYNLQEVRRWLEKNFSER       
                     YGVAFERVCIVQRQKIAYLGGKGPFYYNLQEVRRWLEKNFSER       
KK949927.1:subs 9432 tgggtgcgtagcacaagtcggagctttaccggcctcgaataga       
                     agtctagtgttagaatcatggagctaaataatgggtaaatgag       
                     tgactatgttggagatttaaagcccccctaacgtggggtccga       


//
>KK949927.1:subseq(782350,10560).pep
MGILSVDLLITLQILPVFFSNCLFLALYDSVILLKHVVLLLSRSKSTRGEWRRMLTSEGM
RCIWKSFLLDAYKQVKLGEDAPNSSVVHVSNPDRGDNRGNGAQGKTVDGTECHLLDFASS
ERPLVVNFGSATXPPFISQLPAFSKLVEEFSSVADFLLVYIDEAHPSDGWAVPGDSSLSF
EVKKHQNQEDRCAAAHQLLERFSLPPQCRVVADRMDNNANVAYGVAFERVCIVQRQKIAY
LGGKGPFYYNLQEVRRWLEKNFSER
//
>KK949927.1:subseq(782350,10560).[1000:9560].sp
ATGGGCATCCTCAGCGTAGACTTGCTGATCACACTGCAAATTCTGCCGGTTTTTTTCTCC
AACTGCCTCTTCCTGGCACTCTATGACTCGGTCATTCTCCTCAAGCACGTGGTGCTGCTG
TTGAGCCGCTCCAAGTCCACTCGCGGGGAGTGGAGGCGCATGCTGACCTCAGAGGGAATG
CGCTGCATCTGGAAGAGCTTCCTCCTCGATGCCTACAAACAGGTGAAATTGGGTGAAGAT
GCCCCTAATTCCAGTGTGGTGCATGTCTCCAATCCAGATAGAGGTGACAACAGAGGAAAT
GGTGCCCAGGGGAAGACAGTTGATGGAACTGAGTGCCATCTTCTTGACTTTGCCAGCTCT
GAGCGCCCACTGGTGGTCAACTTTGGCTCAGCCACTTGACCTCCTTTTATTAGCCAGCTG
CCAGCCTTCAGCAAACTGGTGGAAGAGTTCTCATCAGTGGCTGACTTCCTGTTGGTCTAC
ATTGATGAGGCTCATCCTTCAGATGGTTGGGCGGTGCCTGGGGACTCTTCTTTGTCTTTT
GAGGTGAAGAAGCACCAGAACCAGGAAGACCGATGTGCTGCAGCCCACCAGCTTCTGGAG
CGTTTCTCCTTGCCGCCCCAGTGCCGAGTTGTGGCTGACCGTATGGACAATAATGCCAAT
GTAGCTTATGGGGTAGCCTTTGAACGTGTGTGTATTGTGCAGAGACAGAAAATTGCTTAT
CTAGGAGGAAAGGGCCCCTTCTACTACAACCTTCAAGAAGTCCGGCGTTGGCTGGAGAAG
AATTTCAGCGAGAGA
//
KK949927.1:subseq(782350,10560)	GeneWise	match	1000	9560	613.00	+	.	KK949927.1:subseq(782350,10560)-genewise-prediction-1
KK949927.1:subseq(782350,10560)	GeneWise	cds	1000	1221	0.00	+	0	KK949927.1:subseq(782350,10560)-genewise-prediction-1
KK949927.1:subseq(782350,10560)	GeneWise	intron	1222	8987	0.00	+	.	KK949927.1:subseq(782350,10560)-genewise-prediction-1
KK949927.1:subseq(782350,10560)	GeneWise	cds	8988	9560	0.00	+	0	KK949927.1:subseq(782350,10560)-genewise-prediction-1
//

genewise output
Score 16.47 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000850_2.0   96 DNRGNGAQGKTVDGTECHL                               
                     DNR  G+       +ECHL                               
                     DNRIQGSDSTCFRDSECHL                               
KK949927.1:subs-3657 gaaacgagtattagtgtcc                               
                     aagtaggaccgtgacagat                               
                     ccatgattactcattgctc                               


//
>KK949927.1:subseq(782350,10560).pep
DNRIQGSDSTCFRDSECHL
//
>KK949927.1:subseq(782350,10560).[3657:3599].sp
GACAACAGAATTCAGGGAAGTGATTCAACCTGTTTCAGAGATTCTGAGTGCCATCTC
//
KK949927.1:subseq(782350,10560)	GeneWise	match	3657	3601	16.47	-	.	KK949927.1:subseq(782350,10560)-genewise-prediction-1
KK949927.1:subseq(782350,10560)	GeneWise	cds	3657	3601	0.00	-	0	KK949927.1:subseq(782350,10560)-genewise-prediction-1
//
