Predicted by: exonerate Blastx evalue: 2e-34
Query protein: gi|47132603|ref|NP_998758.1| type I iodothyronine deiodinase isoform b [Homo sapiens] >gi|46850118|gb|AAT02481.1| type I iodothyronine deiodinase splice variant b [Homo sapiens]
Positions on query: 1-183 Query length: 185

Target name: KL200742.1:subseq_2971779,30149_
Positions on target: 29329-29473,14999-15142,10551-10750,7925-7984 Strand: -


  Query   MGLPQPGLWLKRLWVLLEVAVHVVVGKVLLILFPDRVKRNILAMGEKTG <---Intron---> NRPLV
          ||| / ||||||| /||/||| | |||||/ |||/|||/||||||//|| <  14186bp   > |||||
  Target  MGLTRLGLWLKRLCILLQVAVEVAVGKVLMTLFPERVKQNILAMGQQTG                NRPLV
          agcaacgctcacctactcggggggggagtaactcgagacaacgagccag                aaccg
          tgtcgtgtgtagtgtttatctatctgatttcttcagtaaattctgaac                gagctt
          gggcgagagcggctacgggagggtgcggagaacaaacggctgcgcggc                ccgagg
                                                                                
  
  Query   LNFGSCTUPSFMFKFDQFKRLIEDFSSIADFLVIYIEEAHASD <---Intron---> GWAFKNNMDIR
          |||||||||||/|||||/|||/||| | ||||/|||||||||| <   4248bp   > |||||||/|||
  Target  LNFGSCTUPSFLFKFDQYKRLVEDFGSAADFLIIYIEEAHASD                GWAFKNNVDIR
          catgatatcttctatgctaacgggtgtgggtcaatagggcgtg                gtgtaaaggaa
          tatgggcgcctttataaaagttaatgcccattttataacacc                aggctaaatatg
          gttctccatattcatcgcgataacttcaatccctctaaatga                tcgttgctgccg
                 *                                                              
  
  Query   NHQNLQDRLQAAHLLLARSPQCPVVVDTMQNQSSQLYAALPERLYIIQEGRILYK <---Intron--->
           |||||||| ||||||||||||||||||||| ||| ||||||||||/|||||||| <   2566bp   >
  Target  QHQNLQDRLWAAHLLLARSPQCPVVVDTMQNLSSQQYAALPERLYILQEGRILYK               
          cccaccgcctggccccgaacctcggggaacacaacctggccgactaccggaacta               
          aaaataagtgccatttcggcagctttactaatggaaacctcagtattaaggttaa               
          gcgccgccggcccgggtgccgcggggcgggcgccggtgcgcggccacggcgcctg               
                                                                                
  
  Query    GKSGPWNYNPEEVRAVLEKL
           || |||||||||||||||/|
  Target   GKPGPWNYNPEEVRAVLERL
           gacgctatacgggcggcgac
           gacgcgaaacaatgcttagt
           tatctgcctagactttaagt