Predicted by: exonerate Blastx evalue: 7e-12
Query protein: gi|378925615|ref|NP_001243777.1| selenoprotein S [Cricetulus griseus]
Positions on query: 1-190 Query length: 190

Target name: KL203812.1:subseq_1733153,30074_
Positions on target: 14999-15074,14307-14441,13898-14004,9993-10082,9722-9800,6868-6950 Strand: -


  Query   MEHAEEPLSARPALETEGLRFLHVTV <---Intron---> GSLLASYGWYILFSCIFLYIVIQKLAVR
          ||  || ||||||||||||||||||| <   557bp    > |||||||||||||/|/ ||/| |||/||
  Target  MERDEEQLSARPALETEGLRFLHVTV                GSLLASYGWYILFACVLLYVVFQKLSVR
          agcgggcctgccgcgaggcctccgag                gtccgatgttactgtgcctggtcactgc
          tagaaaatccgcctacagtgttatc                tgcttcgaggatttcgtttatttaatctg
          ggctagggcggtgggcgcgctgccg                gccgtcctcgcctccccactgctggttca
                                                                                
  
  Query   LRALRQRQLDQAEAVLE <---Intron---> PDVVVKRQEALAAARLRMQEDLNAQVEKHKEKLRQ <
          |||||||||||||| || <   302bp    > ||||||||||||||||/|||||||||||||||||| <
  Target  LRALRQRQLDQAEAALE                PDVVVKRQEALAAARLKMQEDLNAQVEKHKEKLRQ  
          cagtacaccgcggggcg                cggggaccggtgggctaacggcagcggacagacac  
          tgctgagataacacct                acatttagaactcccgtataaatacataaaaaatga  
          gacggggggcatgatg                gttgtgaaaataatttgagggtaccataatgaaaag  
                                                                                
  
  Query   ---Intron---> LEEEKRRQKIEMWDSMQEGRSYRRNTGRPQ <---Intron---> EEDGPGPSTS
             3815bp   > |||||||||||||/||||||||||| |/|| <   192bp    > ||| ||||||
  Target                LEEEKRRQKIEMWESMQEGRSYRRNAGKPQ                EEDSPGPSTS
                        cgggaaacaagatgaacggaataaaggacc                gggacgctat
                        taaaaggaatatgagtaagggaggacgaca                aaagcgcccc
                        taagaggggcagggcgaacaccagcaagtg                aacttattta
                                                                                
  
  Query   SVTPKRKSDKKPLRGGG <---Intron---> YNPLTGEGGGTCSWRPGRRGPSSGGUS
          || |||||||||||||| <   2771bp   > |||||||||||||||||||||||||||
  Target  SVIPKRKSDKKPLRGGG                YNPLTGEGGGTCSWRPGRRGPSSGGUS
          tgacacatgaactcggg                taccagggggatttacgcagcttggta
          cttcagacaaactggg                gaactcgagggcgcggcggggcccgggg
          tcccaagtcagtggat                ttctgttactacccgatacgcaattaac
                                                                    * 