Find start end points: [82,66200][130,66356] Score 11571
Recovering alignment: Alignment recovered] Explicit read offff8%

genewise output
Score 33.39 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

Information
	Name gi|397456032|gb|JH739468.1|:subseq(30000,100000) is longer than
allowed name block (15). Truncating

SPP00000123_2.0   83 RLVPPPAPA---WIPTPVPTPVPVRNPTPV-PTPARTLTPPVRVPAPAP 
                     R+   PAPA   W+P P P P  ++N +P  P PA    P +   AP P 
                     RITKAPAPAHSHWLPLPAPVPGSLKNKSPYSPVPAWWGGPSLLPRAPRP 
gi|397456032|gb66199 caaagcgcgctctccccgcgcgttaaaacttcgcgttggctccccgcac 
                     gtcacccccacagtctccctcgctaaagcacctccggggccttcgccgc 
                     acagcactcctcggcgccagcctgacacacagttcggggacagctcagt 


SPP00000123_2.0  128 AQLL                                              
                      Q L                                              
                     LQEL                                              
gi|397456032|gb66346 ccgc                                              
                     taat                                              
                     gggg                                              


//
>gi|397456032|gb|JH739468.1|:subseq(30000,100000).pep
RITKAPAPAHSHWLPLPAPVPGSLKNKSPYSPVPAWWGGPSLLPRAPRPLQEL
//
>gi|397456032|gb|JH739468.1|:subseq(30000,100000).[66199:66357].sp
CGAATCACAAAGGCCCCAGCCCCTGCCCACTCTCACTGGCTGCCCCTGCCCGCCCCAGTG
CCCGGCTCTTTGAAAAACAAAAGCCCATACTCACCGGTTCCTGCCTGGTGGGGGGGGCCA
TCCCTACTGCCCCGTGCCCCAAGGCCTCTGCAGGAGCTG
//
gi|397456032|gb|JH739468.1|:subseq(30000,100000)	GeneWise	match	66199	66357	35.38	+	.	gi|397456032|gb|JH739468.1|:subseq(30000,100000)-genewise-prediction-1
gi|397456032|gb|JH739468.1|:subseq(30000,100000)	GeneWise	cds	66199	66357	0.00	+	0	gi|397456032|gb|JH739468.1|:subseq(30000,100000)-genewise-prediction-1
//
Find start end points: [178,33572][228,33710] Score 13085
Recovering alignment: Alignment recovered02] Explicit read off8%

genewise output
Score 37.76 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

Information
	Name gi|397456032|gb|JH739468.1|:subseq(30000,100000) is longer than
allowed name block (15). Truncating

SPP00000123_2.0  179 PSVSSEAGPAPGPLPTRTPLAANSPGPTLDFTFRADPSAIGLADPPIPS 
                     PS S  A PAP P P RTPL  NSP P   +       A+G+A P     
                     PSPSMAASPAPAPGPLRTPLTLNSPAPAEALGH----GAVGMAPPTRQE 
gi|397456032|g-66430 cactaggtcgcgcgctaaccacatcgcgggtgc    ggggagccaacg 
                     cgcctccccccccgctgcctctacccccactga    gctgtccccgaa 
                     ccccgtcaacatcctaaccacccaattagcggc    gaaggccccgga 


SPP00000123_2.0  228 PV                                                
                     PV                                                
                     PV                                                
gi|397456032|g-66295 cg                                                
                     ct                                                
                     gg                                                


//
>gi|397456032|gb|JH739468.1|:subseq(30000,100000).pep
PSPSMAASPAPAPGPLRTPLTLNSPAPAEALGHGAVGMAPPTRQEPV
//
>gi|397456032|gb|JH739468.1|:subseq(30000,100000).[66430:66288].sp
CCCAGCCCCTCCATGGCTGCCTCACCAGCCCCAGCTCCCGGCCCTTTAAGAACCCCCCTA
ACCCTCAACTCACCAGCTCCTGCAGAGGCCTTGGGGCACGGGGCAGTAGGGATGGCCCCC
CCCACCAGGCAGGAACCGGTG
//
gi|397456032|gb|JH739468.1|:subseq(30000,100000)	GeneWise	match	66430	66290	40.75	-	.	gi|397456032|gb|JH739468.1|:subseq(30000,100000)-genewise-prediction-1
gi|397456032|gb|JH739468.1|:subseq(30000,100000)	GeneWise	cds	66430	66290	0.00	-	0	gi|397456032|gb|JH739468.1|:subseq(30000,100000)-genewise-prediction-1
//