Find start end points: [0,50990][271,51788] Score 130256
Recovering alignment: Alignment recovered Explicit read offfe 77%
genewise output
Score 375.84 bits over entire alignment
Scores as bits over a synchronous coding model
Warning: The bits scores is not probablistically correct for single seqs
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Information
Name gi|397456552|gb|JH738948.1|:subseq(10000,100000) is longer than
allowed name block (15). Truncating
SPP00000016_2.0 1 MLRSLLLHSLRLCAQTASCLVLFPRFLGTAFMLWLLDFLCIRKHFLGRR
ML L +H+ + AQ A+CL+LFPRFL +A MLWLLDFLCIRK L
MLPGLGVHTWQRLAQAAACLLLFPRFLLSAAMLWLLDFLCIRKKVLA--
gi|397456552|gb50989 accgcggcatcccgcgggtccctcctccaggactccgtctaaaagcg
ttcgtgtacgagtcacccgttttcgtttgccttgttattgtgaattc
ggcggcgccggcgcggcccggcccccgcccggcgggtcgccgggggc
SPP00000016_2.0 50 RRGQPEPEVELNSEGEEVPPDDPPICVSDDNRLCTLASLKAVWHGQKLD
G P + GE PPDDPP+CVSD NRL T SLKAVWHG KLD
--GGPAAAAAAAAAGEP-PPDDPPLCVSDSNRLFTRESLKAVWHGHKLD
gi|397456552|gb51130 ggcgggggggggggc ccggccctgtgtacctacgtcaggtcgcacg
ggccccccccccgac ccaacctgtcacagttcgactactgagaata
gcgggggggaggggg ccccgggcgccgccgcggggggcggcccggc
SPP00000016_2.0 99 FFKQAHEGGPAPNSEVVLPDGFQSQHILDYAQGNRPLVLNFGSCTXPPF
+FK AH G APN EV+ DG + +LD+A+G RPLVLNFGSCTXPPF
LFKAAHVGARAPNPEVIRLDGQKRLRLLDFARGKRPLVLNFGSCTXPPF
gi|397456552|gb51268 ttaggcgggcgcacggaccggcacccccgtgcgacccgcatgatatcct
ttaccatgcgccacattgtagaagtgttatcggagctttatgggcgcct
gcgggcgcgggcccgccggcgggggccgcccccgggcgcccccccagcc
SPP00000016_2.0 148 MARMSAFQRLVTKYQRDVDFLIIYIEEAHPSDGWVTTDSPYIIPQHRSL
MAR+ AFQRL + DFL++YIEEAHPSDGWV++D+ Y IP+H+ L
MARLRAFQRLAAHFLDIADFLLVYIEEAHPSDGWVSSDAAYKIPKHQCL
gi|397456552|gb51415 agcccgtcccggctcgaggtccgtagggcctggtgatgggtaacacctc
tcgtgctagtccattatcattttataacaccaggtgcaccaatcaaagt
gccgcccgcgcgccgcccccgggccgggcccccgccgccccgccgcgcg
SPP00000016_2.0 197 EDRVSAARVLQQGAPGCALVLDTMANSSSSAYGAYFERLYVIQSGTIMY
+DR+ AA+++++GAPGC L +DTM N+SS+AYGAYFERLY++Q +MY
QDRLRAAQLMREGAPGCPLAVDTMDNASSAAYGAYFERLYIVQEERVMY
gi|397456552|gb51562 cgcccggccacgggcgtccgggaagagtaggtggttgcctagcggcgat
aagtgccattgagccggctctactaaccgccagcatagtattaaagtta
gcggggggcggacccgcggggccgccccccccacccgggcccgggccgc
SPP00000016_2.0 246 QGGRGPDGYQVSELRTWLERYDEQLHG
QGGRGP+GY++SELR+WL++Y +L G
QGGRGPEGYKISELRSWLDQYKTRLRG
gi|397456552|gb51709 cggcgcggtaatgccatcgctaacccg
aggggcagaatcatgggtaaaacgtgg
gcccccgccgcgggccgccgcgcgggc
//
>gi|397456552|gb|JH738948.1|:subseq(10000,100000).pep
MLPGLGVHTWQRLAQAAACLLLFPRFLLSAAMLWLLDFLCIRKKVLAGGPAAAAAAAAAG
EPPPDDPPLCVSDSNRLFTRESLKAVWHGHKLDLFKAAHVGARAPNPEVIRLDGQKRLRL
LDFARGKRPLVLNFGSCTXPPFMARLRAFQRLAAHFLDIADFLLVYIEEAHPSDGWVSSD
AAYKIPKHQCLQDRLRAAQLMREGAPGCPLAVDTMDNASSAAYGAYFERLYIVQEERVMY
QGGRGPEGYKISELRSWLDQYKTRLRG
//
>gi|397456552|gb|JH738948.1|:subseq(10000,100000).[50989:51789].sp
ATGCTGCCCGGGCTGGGCGTGCACACCTGGCAGCGCCTGGCCCAGGCGGCCGCCTGCCTG
CTGCTCTTCCCCCGCTTCCTGCTCAGCGCCGCGATGCTCTGGCTGCTGGATTTCCTGTGC
ATCAGGAAGAAGGTGCTGGCCGGGGGCCCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGGG
GAGCCGCCCCCCGACGACCCGCCGCTGTGCGTGTCCGACTCGAACCGCCTGTTCACGCGG
GAGTCGCTGAAGGCCGTGTGGCACGGCCACAAGCTGGACTTGTTCAAGGCGGCGCACGTG
GGCGCGCGGGCGCCCAACCCCGAGGTCATCCGGCTGGACGGGCAGAAGCGGCTGCGCCTC
CTGGACTTCGCCCGCGGCAAGCGGCCGCTCGTGCTCAACTTCGGCAGCTGCACCTGACCG
CCCTTCATGGCCCGCCTGCGCGCCTTCCAGCGCCTGGCCGCGCACTTCCTGGACATCGCC
GACTTCCTGCTGGTGTACATCGAGGAGGCGCACCCCTCCGACGGCTGGGTCAGCTCGGAC
GCCGCCTACAAGATCCCCAAGCACCAGTGCCTGCAGGACCGGCTGCGGGCGGCGCAGCTC
ATGCGGGAAGGCGCCCCCGGGTGCCCGCTGGCGGTGGACACCATGGACAACGCCTCCAGC
GCCGCCTACGGAGCCTACTTCGAGCGGCTGTACATCGTCCAGGAGGAGCGCGTCATGTAC
CAGGGCGGCCGCGGCCCCGAGGGCTACAAGATCTCGGAGCTGCGCAGCTGGCTCGACCAG
TACAAGACCCGGCTGCGGGGC
//
gi|397456552|gb|JH738948.1|:subseq(10000,100000) GeneWise match 50989 51789 378.83 + . gi|397456552|gb|JH738948.1|:subseq(10000,100000)-genewise-prediction-1
gi|397456552|gb|JH738948.1|:subseq(10000,100000) GeneWise cds 50989 51789 0.00 + 0 gi|397456552|gb|JH738948.1|:subseq(10000,100000)-genewise-prediction-1