Find start end points: [87,50001][245,50481] Score 55826
Recovering alignment: Alignment recovered] Explicit read offff51%%

genewise output
Score 161.08 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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Information
	Name gi|397456552|gb|JH738948.1|:subseq(11286,101000) is longer than
allowed name block (15). Truncating

SPP00000002_2.0   88 LGGLAPNCPVVRLSGQ-RCNIWEFMQGNRPLVLNFGSCTXPSFMFKFDQ 
                     +G  APN  V+RL GQ R  + +F +G RPLVLNFGSCTXP FM ++   
                     VGARAPNPEVIRLDGQKRLRLLDFARGKRPLVLNFGSCTXPPFMARLRA 
gi|397456552|gb50000 gggcgcacggaccggcacccccgtgcgacccgcatgatatcctagcccg 
                     tgcgccacattgtagaagtgttatcggagctttatgggcgccttcgtgc 
                     gcgggcccgccggcgggggccgcccccgggcgcccccccagccgccgcc 


SPP00000002_2.0  136 FKRLIEDFSSIADFLVIYIEEAHASDGWAFKNNM-DIRNHQNLQDRLQA 
                     F+RL   F  IADFL++YIEEAH SDGW   +    I  HQ LQDRL+A 
                     FQRLAAHFLDIADFLLVYIEEAHPSDGWVSSDAAYKIPKHQCLQDRLRA 
gi|397456552|gb50147 tcccggctcgaggtccgtagggcctggtgatgggtaacacctccgcccg 
                     tagtccattatcattttataacaccaggtgcaccaatcaaagtaagtgc 
                     cgcgcgccgcccccgggccgggcccccgccgccccgccgcgcggcgggg 


SPP00000002_2.0  184 AHLLLARSPQCPVVVDTMQNQSSQLYAALPERLYIIQEGRILYKGKSGP 
                     A L+   +P CP+ VDTM N SS  Y A  ERLYI+QE R++Y+G  GP 
                     AQLMREGAPGCPLAVDTMDNASSAAYGAYFERLYIVQEERVMYQGGRGP 
gi|397456552|gb50294 gccacgggcgtccgggaagagtaggtggttgcctagcggcgatcggcgc 
                     cattgagccggctctactaaccgccagcatagtattaaagttaaggggc 
                     ggcggacccgcggggccgccccccccacccgggcccgggccgcgccccc 


SPP00000002_2.0  233 WNYNPEEVRAVLEK                                    
                       Y   E+R+ L++                                    
                     EGYKISELRSWLDQ                                    
gi|397456552|gb50441 ggtaatgccatcgc                                    
                     agaatcatgggtaa                                    
                     gccgcgggccgccg                                    


//
>gi|397456552|gb|JH738948.1|:subseq(11286,101000).pep
VGARAPNPEVIRLDGQKRLRLLDFARGKRPLVLNFGSCTXPPFMARLRAFQRLAAHFLDI
ADFLLVYIEEAHPSDGWVSSDAAYKIPKHQCLQDRLRAAQLMREGAPGCPLAVDTMDNAS
SAAYGAYFERLYIVQEERVMYQGGRGPEGYKISELRSWLDQ
//
>gi|397456552|gb|JH738948.1|:subseq(11286,101000).[50000:50482].sp
GTGGGCGCGCGGGCGCCCAACCCCGAGGTCATCCGGCTGGACGGGCAGAAGCGGCTGCGC
CTCCTGGACTTCGCCCGCGGCAAGCGGCCGCTCGTGCTCAACTTCGGCAGCTGCACCTGA
CCGCCCTTCATGGCCCGCCTGCGCGCCTTCCAGCGCCTGGCCGCGCACTTCCTGGACATC
GCCGACTTCCTGCTGGTGTACATCGAGGAGGCGCACCCCTCCGACGGCTGGGTCAGCTCG
GACGCCGCCTACAAGATCCCCAAGCACCAGTGCCTGCAGGACCGGCTGCGGGCGGCGCAG
CTCATGCGGGAAGGCGCCCCCGGGTGCCCGCTGGCGGTGGACACCATGGACAACGCCTCC
AGCGCCGCCTACGGAGCCTACTTCGAGCGGCTGTACATCGTCCAGGAGGAGCGCGTCATG
TACCAGGGCGGCCGCGGCCCCGAGGGCTACAAGATCTCGGAGCTGCGCAGCTGGCTCGAC
CAG
//
gi|397456552|gb|JH738948.1|:subseq(11286,101000)	GeneWise	match	50000	50482	161.08	+	.	gi|397456552|gb|JH738948.1|:subseq(11286,101000)-genewise-prediction-1
gi|397456552|gb|JH738948.1|:subseq(11286,101000)	GeneWise	cds	50000	50482	0.00	+	0	gi|397456552|gb|JH738948.1|:subseq(11286,101000)-genewise-prediction-1
//