------- SECIS element -- id:1 -- grade:A ----
 Chromosome = gi|431896762|gb|KB031034.1|:subseq_4571581,6000_ Strand = - Positions = 5723 - 5652
 Found by:  Infernal (score=26.51) Covels (score=31.91)
 Stem2 length = 11   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -9.74

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ...({((((.--....{[[{((((((((([(.....-.........)])))))))))}]]}..--..-.))))})...
 target  UCUACUUGCA--UUAAUGAGAACAGGAACAUAAACU-AUGACCUAGGGGUUUCUGUUGGAUAG--UU-AGCAAUUUAG
                         ****           ^^^                       ****                 

------- SECIS element -- id:2 -- grade:A ----
 Chromosome = gi|431896762|gb|KB031034.1|:subseq_4571581,6000_ Strand = - Positions = 5280 - 5215
 Found by:  Infernal (score=26.44) Covels (score=16.12)
 Stem2 length = 9   Apical loop length = 10   Insertion in stem2 = 1, 0
 Free Energy = -10.9

         ..(((((((.......((((((((((.(((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ...((((((---....([[{(((({(.((((......--.-----...)))))}))))}]])..--..-.))))))...
 target  UUUCCAUAG---UCAAUGAUGGUUCAAUAGGUAAACU--A-----AGUCCUAUAAACCUGAACU--UC-UUUAUGGUUA
                         ****            ^^^                       ****