------- SECIS element -- id:1 -- grade:B ---- Chromosome = gi|431914530|gb|KB030530.1|:subseq_300000,300000_ Strand = - Positions = 238465 - 238386 Found by: Infernal (score=14.6) Covels (score=7.09) Stem2 length = 10 Apical loop length = 21 Insertion in stem2 = 0, 0 Free Energy = -15.2 ..(((((((.......(((((((((((((((...................)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC----cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc ..({(((((---(...{[[(((((((((((.....................)))))))))))]]}......-..))))))}).. target UCCAGUCUU---GGGAAGAGGAGUUCUCACAAAAUCUGACUGUAAAAACUAGUGGGAAUUCUGACUAUCUG-AGUAAGACAGAA **** ^^^ **** ------- SECIS element -- id:2 -- grade:B ---- Chromosome = gi|431914530|gb|KB030530.1|:subseq_300000,300000_ Strand = - Positions = 244402 - 244323 Found by: Infernal (score=14.6) Covels (score=7.09) Stem2 length = 10 Apical loop length = 21 Insertion in stem2 = 0, 0 Free Energy = -15.2 ..(((((((.......(((((((((((((((...................)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC----cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc ..({(((((---(...{[[(((((((((((.....................)))))))))))]]}......-..))))))}).. target UCCAGUCUU---GGGAAGAGGAGUUCUCACAAAAUCUGACUGUAAAAACUAGUGGGAAUUCUGACUAUCUG-AGUAAGACAGAA **** ^^^ **** ------- SECIS element -- id:3 -- grade:B ---- Chromosome = gi|431914530|gb|KB030530.1|:subseq_300000,300000_ Strand = - Positions = 260347 - 260268 Found by: Infernal (score=14.6) Covels (score=7.09) Stem2 length = 10 Apical loop length = 21 Insertion in stem2 = 0, 0 Free Energy = -15.2 ..(((((((.......(((((((((((((((...................)))))))))))))))..........))))))).. model uucggucaugcgUuaAUGAcGgccuggcccuAAAcC----cuuuuuggggcgggccaggcCuGAUGuu-u-uuucaugaccggc ..({(((((---(...{[[(((((((((((.....................)))))))))))]]}......-..))))))}).. target UCCAGUCUU---GGGAAGAGGAGUUCUCACAAAAUCUGACUGUAAAAACUAGUGGGAAUUCUGACUAUCUG-AGUAAGACAGAA **** ^^^ ****