Command line: [exonerate -m p2g --showtargetgff -q ./SelT.fa -t SelT.carpeta/genomic.fa] Hostname: [ws116037] C4 Alignment: ------------ Query: SPP00000106_2.0 # Protein # Selenoprotein T (SelT) # Human (Homo sapiens) Target: gi|472269549|gb|KB715140.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00434, whole genome shotgun sequence Model: protein2genome:local Raw score: 152 Query range: 125 -> 154 Target range: 975927 -> 976014 126 : ValTyrAlaCysMetMetValPhePheLeuSerAsnMetIleGluAsnGlnCysMetS : 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ValTyrAlaCysMetMetValPhePheLeuSerAsnMetIleGluAsnGlnCysMetS 975928 : GTCTATGCATGTATGATGGTTTTCTTCTTGAGCAACATGATTGAGAACCAGTGTATGT : 975985 146 : erThrGlyAlaPheGluIleThrLeuAsn : 154 ||||||||||||||||||||||||||||| erThrGlyAlaPheGluIleThrLeuAsn 975986 : CAACAGGTGCATTTGAGATAACTTTGAAT : 976014 vulgar: SPP00000106_2.0 125 154 . gi|472269549|gb|KB715140.1| 975927 976014 + 152 M 29 87 # --- START OF GFF DUMP --- # # ##gff-version 2 ##source-version exonerate:protein2genome:local 2.2.0 ##date 2013-11-15 ##type DNA # # # seqname source feature start end score strand frame attributes # gi|472269549|gb|KB715140.1| exonerate:protein2genome:local gene 975928 976014 152 + . gene_id 1 ; sequence SPP00000106_2.0 ; gene_orientation . gi|472269549|gb|KB715140.1| exonerate:protein2genome:local cds 975928 976014 . + . gi|472269549|gb|KB715140.1| exonerate:protein2genome:local exon 975928 976014 . + . insertions 0 ; deletions 0 gi|472269549|gb|KB715140.1| exonerate:protein2genome:local similarity 975928 976014 152 + . alignment_id 1 ; Query SPP00000106_2.0 ; Align 975928 126 87 # --- END OF GFF DUMP --- # -- completed exonerate analysis