Command line: [exonerate -m p2g --showtargetgff -q ./SelR1.fa -t SelR1.carpeta/genomic.fa]
Hostname: [ws116037]

C4 Alignment:
------------
         Query: SPP00000087_2.0 # Protein # Methionine-R-sufoxide reductase 1 (SelR1) # Human (Homo sapiens)
        Target: gi|472269404|gb|KB715285.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00579, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 332
   Query range: 0 -> 114
  Target range: 706699 -> 707031

      1 : MetSerPheCysSerPhePheGlyGlyGluValPheGlnAsnHisPheGluProGlyV :     20
          |||||||||! !||||||||||||||||||||||||:!!|||||||||||||||  !|
          MetSerPheTyrSerPhePheGlyGlyGluValPheGluAsnHisPheGluProLeuV
 706700 : ATGTCATTCTACAGCTTCTTCGGGGGCGAGGTTTTCGAGAACCACTTTGAGCCACTTG : 706757

     21 : alTyrValCysAlaLysCysGlyTyrGluLeuPheSerSerArgSerLysTyrAlaHi :     39
          |||||||||||.!!|||! !! !||||||||||||! !||| !!||||||! !! !||
          alTyrValCysThrLysTyrAspTyrGluLeuPhePheSerCysSerLysCysGluHi
 706758 : TCTATGTGTGCACCAAGTATGACTATGAGCTTTTCTTCAGCTGCTCAAAGTGTGAACA : 706814

     40 : sSerSerProTrpProAlaPheThrGluThrIleHisAlaAspSerValAlaLysArg :     58
          |! !:!!         |||||||||||||||!!:||||||||| !!|||||||||!.!
          sMetAla---------AlaPheThrGluThrMetHisAlaAspArgValAlaLysHis
 706815 : CATGGCC---------GCTTTCACTGAGACCATGCATGCTGATCGTGTGGCCAAGCAT : 706862

     59 : ProGluHisAsnArgSerGluAlaLeuLysValSerCysGlyLysCysGlyAsnGlyL :     78
          ! !|||||||||! ! !!||||||||||||! ! !!||||||! !||||||:!!||||
          GlnGluHisAsnThrProGluAlaLeuLysGlyProCysGlyMetCysGlyHisGlyL
 706863 : CAGGAGCACAATACACCTGAAGCCTTAAAAGGGCCCTGTGGCATGTGTGGCCATGGGC : 706922

     79 : euGlyHisGluPheLeuAsnAspGlyProLysProGlyGlnSer--ArgPheUnkIle :     96
          ||||||||||||||||||||||||||||||||||||||||||||##   |||   |||
          euGlyHisGluPheLeuAsnAspGlyProLysProGlyGlnSer##---Phe***Ile
 706923 : TGGGTCATGAGTTCCTGAATGATGGCCCCAAGCCAGGGCAGTCTGC---TTCTGAATA : 706975

     97 : PheSerSerSerLeuLysPheValProLysGlyLysGluThrSerAlaSerGln :    114
          ||||||  !! !|||||||||  !  !|||||||||! !|||||||||||||||
          PheSerHisLeuLeuLysPheSerTrpLysGlyLysGlyThrSerAlaSerGln
 706976 : TTTAGCCACTTGCTGAAGTTCAGCTGGAAAGGCAAAGGAACTTCTGCCTCTCAG : 707031

vulgar: SPP00000087_2.0 0 114 . gi|472269404|gb|KB715285.1| 706699 707031 + 332 M 41 123 G 3 0 M 48 144 F 0 2 G 1 0 M 21 63
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2013-11-15
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|472269404|gb|KB715285.1|	exonerate:protein2genome:local	gene	706700	707031	332	+	.	gene_id 1 ; sequence SPP00000087_2.0 ; gene_orientation .
gi|472269404|gb|KB715285.1|	exonerate:protein2genome:local	cds	706700	707031	.	+	.	
gi|472269404|gb|KB715285.1|	exonerate:protein2genome:local	exon	706700	707031	.	+	.	insertions 0 ; deletions 4 ; frameshifts 2
gi|472269404|gb|KB715285.1|	exonerate:protein2genome:local	similarity	706700	707031	332	+	.	alignment_id 1 ; Query SPP00000087_2.0 ; Align 706700 1 123 ; Align 706823 45 144 ; Align 706969 94 63
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis