Command line: [exonerate -m p2g --showtargetgff -q ./sel15.fa -t sel15.carpeta/genomic.fa]
Hostname: [ws116037]

C4 Alignment:
------------
         Query: SPP00000067_2.0 # Protein # 15 kDa selenoprotein (Sel15) # Human (Homo sapiens)
        Target: gi|472268923|gb|KB715734.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold01028, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 765
   Query range: 0 -> 162
  Target range: 414886 -> 469084

      1 : MetAlaAlaGlyProSerGlyCysLeuValProAlaPheGlyLeuArgLeuLeuLeuA :     20
          |||||||||||||||.!!|||!  |||  !! !|||||||||||||||||||||||||
          MetAlaAlaGlyProGlyGlyLeuLeuProLeuAlaPheGlyLeuArgLeuLeuLeuA
 414887 : ATGGCGGCTGGGCCGGGTGGATTGCTCCCGCTGGCGTTTGGGCTGCGTTTGCTCTTGG : 414944

     21 : laThrValLeuGlnAla  >>>> Target Intron 1 >>>>  ValSerAlaPhe :     29
          ||.!!|||||||||.!!           8279 bp           ||||||||||||
          laAlaValLeuGlnThr++                         ++ValSerAlaPhe
 414945 : CTGCTGTACTTCAAACGgt.........................agGTATCTGCATTC : 423250

     30 : GlyAlaGluPheSerSerGluAlaCysArgGluLeuGlyPheSerSerAsnLeuLeuC :     49
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          GlyAlaGluPheSerSerGluAlaCysArgGluLeuGlyPheSerSerAsnLeuLeuC
 423251 : GGGGCAGAGTTTTCATCAGAGGCTTGCAGAGAGTTAGGCTTCTCCAGCAACTTGCTCT : 423310

     50 : ysSerSerCysAspLeuLeuGlyGlnPheAsnLeuLeuGlnLeuAspProAspCysAr :     68
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          ysSerSerCysAspLeuLeuGlyGlnPheAsnLeuLeuGlnLeuAspProAspCysAr
 423311 : GCAGCTCTTGTGATCTTCTTGGACAGTTTAACCTGCTTCAGCTCGATCCTGACTGTAG : 423367

     69 : gGlyCysCysGlnGluGluAlaGlnPheGluThrLysLys  >>>> Target Intr :     82
          ||||||||||||||||||||||||||||||||||||||||           20873 b
          gGlyCysCysGlnGluGluAlaGlnPheGluThrLysLys++                
 423368 : AGGATGCTGTCAGGAAGAAGCACAATTTGAAACAAAAAAGgt................ : 423411

     83 : on 2 >>>>  LeuTyrAlaGlyAlaIleLeuGluValCysGlyUnkLysLeuGlyAr :     97
          p          |||||||||||||||||||||||||||||||||   |||||||||||
                   ++LeuTyrAlaGlyAlaIleLeuGluValCysGly***LysLeuGlyAr
 423412 : .........agCTTTATGCAGGTGCTATTCTTGAAGTTTGTGGATGAAAATTGGGGAG : 444327

     98 : gPheProGlnValGln{A}  >>>> Target Intron 3 >>>>  {la}PheVal :    105
          ||||||||||||||||{|}           21745 bp          {||}||||||
          gPheProGlnValGln{A}++                         ++{la}PheVal
 444328 : GTTCCCTCAAGTCCAA{G}gt.........................ag{CT}TTTGTC : 466096

    106 : ArgSerAspLysProLysLeuPheArgGlyLeuGlnIleLys  >>>> Target In :    120
          ||||||||||||||||||||||||||||||||||||||||||           2815 
          ArgSerAspLysProLysLeuPheArgGlyLeuGlnIleLys++              
 466097 : AGGAGTGATAAACCCAAACTATTCAGAGGACTACAAATCAAGgt.............. : 466143

    121 : tron 4 >>>>  TyrValArgGlySerAspProValLeuLysLeuLeuAspAspAsn :    134
          bp           |||||||||||||||||||||||||||||||||||||||||||||
                     ++TyrValArgGlySerAspProValLeuLysLeuLeuAspAspAsn
 466144 : ...........agTATGTTCGGGGTTCAGATCCTGTATTAAAGCTCTTGGATGACAAC : 468998

    135 : GlyAsnIleAlaGluGluLeuSerIleLeuLysTrpAsnThrAspSerValGluGluP :    154
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          GlyAsnIleAlaGluGluLeuSerIleLeuLysTrpAsnThrAspSerValGluGluP
 468999 : GGGAACATTGCTGAAGAATTAAGCATCCTCAAATGGAACACAGACAGTGTAGAAGAAT : 469058

    155 : heLeuSerGluLysLeuGluArgIle :    162
          ||||||||||||||||||||||||||
          heLeuSerGluLysLeuGluArgIle
 469059 : TCCTGAGTGAAAAGTTGGAACGCATA : 469084

vulgar: SPP00000067_2.0 0 162 . gi|472268923|gb|KB715734.1| 414886 469084 + 765 M 25 75 5 0 2 I 0 8275 3 0 2 M 56 168 5 0 2 I 0 20869 3 0 2 M 21 63 S 0 1 5 0 2 I 0 21741 3 0 2 S 1 2 M 16 48 5 0 2 I 0 2811 3 0 2 M 43 129
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2013-11-11
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	gene	414887	469084	765	+	.	gene_id 1 ; sequence SPP00000067_2.0 ; gene_orientation +
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	cds	414887	414961	.	+	.	
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	exon	414887	414961	.	+	.	insertions 0 ; deletions 0
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	splice5	414962	414963	.	+	.	intron_id 1 ; splice_site "GT"
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	intron	414962	423240	.	+	.	intron_id 1
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	splice3	423239	423240	.	+	.	intron_id 0 ; splice_site "AG"
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	cds	423241	423408	.	+	.	
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	exon	423241	423408	.	+	.	insertions 0 ; deletions 0
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	splice5	423409	423410	.	+	.	intron_id 2 ; splice_site "GT"
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	intron	423409	444281	.	+	.	intron_id 2
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	splice3	444280	444281	.	+	.	intron_id 1 ; splice_site "AG"
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	cds	444282	444345	.	+	.	
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	exon	444282	444345	.	+	.	insertions 0 ; deletions 0
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	splice5	444346	444347	.	+	.	intron_id 3 ; splice_site "GT"
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	intron	444346	466090	.	+	.	intron_id 3
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	splice3	466089	466090	.	+	.	intron_id 2 ; splice_site "AG"
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	cds	466091	466140	.	+	.	
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	exon	466091	466140	.	+	.	insertions 0 ; deletions 0
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	splice5	466141	466142	.	+	.	intron_id 4 ; splice_site "GT"
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	intron	466141	468955	.	+	.	intron_id 4
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	splice3	468954	468955	.	+	.	intron_id 3 ; splice_site "AG"
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	cds	468956	469084	.	+	.	
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	exon	468956	469084	.	+	.	insertions 0 ; deletions 0
gi|472268923|gb|KB715734.1|	exonerate:protein2genome:local	similarity	414887	469084	765	+	.	alignment_id 1 ; Query SPP00000067_2.0 ; Align 414887 1 75 ; Align 423241 26 168 ; Align 444282 82 63 ; Align 466093 104 48 ; Align 468956 120 129
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis