TBLASTN 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SPP00000144_2.0 # Protein # Eukaryotic elongation factor
(eEFSec) # Human (Homo sapiens)
(596 letters)
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/geno
me.fa
16,710 sequences; 3,156,886,159 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|472269049|gb|KB715608.1| Leptonychotes weddellii isolate WS11... 420 e-115
gi|472265436|gb|KB719221.1| Leptonychotes weddellii isolate WS11... 110 2e-22
gi|472268046|gb|KB716611.1| Leptonychotes weddellii isolate WS11... 63 5e-08
gi|472269856|gb|KB714833.1| Leptonychotes weddellii isolate WS11... 59 7e-07
gi|472268474|gb|KB716183.1| Leptonychotes weddellii isolate WS11... 59 1e-06
gi|472269574|gb|KB715115.1| Leptonychotes weddellii isolate WS11... 54 4e-05
gi|472268785|gb|KB715872.1| Leptonychotes weddellii isolate WS11... 50 3e-04
gi|472269749|gb|KB714940.1| Leptonychotes weddellii isolate WS11... 50 6e-04
gi|472269975|gb|KB714714.1| Leptonychotes weddellii isolate WS11... 49 8e-04
gi|472262679|gb|KB721978.1| Leptonychotes weddellii isolate WS11... 48 0.002
gi|472269980|gb|KB714709.1| Leptonychotes weddellii isolate WS11... 48 0.002
gi|472267331|gb|KB717326.1| Leptonychotes weddellii isolate WS11... 47 0.005
gi|472266438|gb|KB718219.1| Leptonychotes weddellii isolate WS11... 46 0.009
gi|472265732|gb|KB718925.1| Leptonychotes weddellii isolate WS11... 45 0.011
gi|472269763|gb|KB714926.1| Leptonychotes weddellii isolate WS11... 45 0.011
gi|472269385|gb|KB715304.1| Leptonychotes weddellii isolate WS11... 45 0.019
gi|472269962|gb|KB714727.1| Leptonychotes weddellii isolate WS11... 45 0.019
gi|472269042|gb|KB715615.1| Leptonychotes weddellii isolate WS11... 44 0.025
gi|472269553|gb|KB715136.1| Leptonychotes weddellii isolate WS11... 44 0.025
gi|472266960|gb|KB717697.1| Leptonychotes weddellii isolate WS11... 44 0.033
gi|472269068|gb|KB715589.1| Leptonychotes weddellii isolate WS11... 44 0.033
gi|472269423|gb|KB715266.1| Leptonychotes weddellii isolate WS11... 43 0.056
gi|472269875|gb|KB714814.1| Leptonychotes weddellii isolate WS11... 42 0.095
gi|472269752|gb|KB714937.1| Leptonychotes weddellii isolate WS11... 41 0.21
gi|472269770|gb|KB714919.1| Leptonychotes weddellii isolate WS11... 41 0.21
gi|472268979|gb|KB715678.1| Leptonychotes weddellii isolate WS11... 41 0.28
gi|472269780|gb|KB714909.1| Leptonychotes weddellii isolate WS11... 41 0.28
gi|472269074|gb|KB715583.1| Leptonychotes weddellii isolate WS11... 39 1.4
gi|472269310|gb|KB715347.1| Leptonychotes weddellii isolate WS11... 39 1.4
gi|472269230|gb|KB715427.1| Leptonychotes weddellii isolate WS11... 37 5.2
gi|472269961|gb|KB714728.1| Leptonychotes weddellii isolate WS11... 37 5.2
gi|472268428|gb|KB716229.1| Leptonychotes weddellii isolate WS11... 36 8.9
>gi|472269049|gb|KB715608.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00902, whole genome
shotgun sequence
Length = 878086
Score = 420 bits (1080), Expect = e-115
Identities = 198/220 (90%), Positives = 211/220 (95%)
Frame = +1
Query: 262 KVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEK 321
+VVKKVKSMQMFHMP+TSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAA+ISVEK
Sbjct: 513388 QVVKKVKSMQMFHMPVTSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAAIISVEK 513567
Query: 322 IPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDNFDQEPILDSFNFSQEYLFQEQYLS 381
IPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPD+FD EP+LDSF+FS+EYLFQEQYL
Sbjct: 513568 IPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDSFDHEPVLDSFDFSREYLFQEQYLD 513747
Query: 382 KDLTPAVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHTNT 441
KDL P TD+DEA+KK GQATEG CPRQQWALVEFEKPVTCPRLCLVIGSRLDADIH N
Sbjct: 513748 KDLAPVATDSDEANKKTGQATEGRCPRQQWALVEFEKPVTCPRLCLVIGSRLDADIHANM 513927
Query: 442 CRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVER 481
CRLAFHG+LLHGLED++YA+SFLPRLKVYKLKHKHGLVER
Sbjct: 513928 CRLAFHGVLLHGLEDKDYAESFLPRLKVYKLKHKHGLVER 514047
Score = 135 bits (340), Expect = 8e-30
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +2
Query: 98 SLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLPEGKRQ 157
S + +++ GAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLL EGKRQ
Sbjct: 413567 SCLLSLLAGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQ 413746
Query: 158 AAIDKMTKKMQKTLENTK 175
AAIDKMTKKMQ+TLENTK
Sbjct: 413747 AAIDKMTKKMQRTLENTK 413800
Score = 114 bits (284), Expect = 3e-23
Identities = 55/65 (84%), Positives = 59/65 (90%)
Frame = +3
Query: 532 IPGGLSPESKKILTPALKKRARAGRGEATRQEESAERSEPSQHVVLSLTFKRYVFDTHKR 591
+ GGLSPESKKILTP LKKR RAGRGEA +QEE AERSEP+QHV LSL+FKRYVFDTHKR
Sbjct: 576327 LAGGLSPESKKILTPTLKKRGRAGRGEAAKQEEVAERSEPAQHVALSLSFKRYVFDTHKR 576506
Query: 592 MVQSP 596
MVQSP
Sbjct: 576507 MVQSP 576521
Score = 106 bits (264), Expect = 5e-21
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +3
Query: 477 GLVERAMDDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGL 536
G+ + MDD+SVIGRSLFKKETNIQLFVGLKV+LSTGELG+IDSAFGQSGKFKIHIPG
Sbjct: 530700 GVWGQVMDDHSVIGRSLFKKETNIQLFVGLKVYLSTGELGVIDSAFGQSGKFKIHIPGEC 530879
Query: 537 SP 538
SP
Sbjct: 530880 SP 530885
Score = 44.7 bits (104), Expect = 0.019
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 87 QVTLVDCPGHASLIRTIIGG 106
QVTLVDCPGHASLIRTIIGG
Sbjct: 328608 QVTLVDCPGHASLIRTIIGG 328667
>gi|472265436|gb|KB719221.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold04515, whole genome
shotgun sequence
Length = 113241
Score = 110 bits (276), Expect = 2e-22
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +3
Query: 202 IPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPAL 261
+ L LLTSQISIPTRDPSGP LMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPAL
Sbjct: 53268 VASLF*LLTSQISIPTRDPSGPLLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPAL 53447
Query: 262 KV 263
KV
Sbjct: 53448 KV 53453
>gi|472268046|gb|KB716611.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01905, whole genome
shotgun sequence
Length = 517504
Score = 63.2 bits (152), Expect = 5e-08
Identities = 64/292 (21%), Positives = 108/292 (36%), Gaps = 25/292 (8%)
Frame = -3
Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96
DK RERGIT+D+ F VT++D PGH
Sbjct: 52823 DKLKAERERGITIDISLWKFETS-------------------------KYYVTIIDAPGH 52719
Query: 97 ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
I+ +I G D +L++ ++K QT+ L + ++L+V +NK
Sbjct: 52718 RDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHAFLAY-TLGVKQLIVCVNK 52542
Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXIP-- 203
+D Q +K+ K++ ++ + + +P+
Sbjct: 52541 MDSTEPPYSQKRYEKIVKEVSTYIKKIGYNPNTVAFVPISGWNSDNMLEPSANMPWFKGW 52362
Query: 204 ------------ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSIS 251
L+E L I PT P + + + I G GTV G + +G +
Sbjct: 52361 KVTRKDGNASGTTLLEALDC-ILPPTHPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 52185
Query: 252 LGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303
G V + V +VKS++M H ++ A+ GD +G V K + G V
Sbjct: 52184 PGMVVTFAPVSVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRCGSV 52029
>gi|472269856|gb|KB714833.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00127, whole genome
shotgun sequence
Length = 2646173
Score = 59.3 bits (142), Expect = 7e-07
Identities = 62/292 (21%), Positives = 107/292 (36%), Gaps = 25/292 (8%)
Frame = -3
Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96
DK RERGIT+D+ F VT++D PGH
Sbjct: 2165964 DKLKAERERGITIDISLWKFETS-------------------------KYYVTIIDAPGH 2165860
Query: 97 ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
I+ +I G D +L++ ++K QT+ L+ + ++L+V +NK
Sbjct: 2165859 RDFIKNMITGTSQADCAVLIVAPGVCEFEASISKNGQTRE-HALLAYTLGVKQLIVGVNK 2165683
Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFR--GAPIIPVXXXXXXXXXXXXXXXXXI--- 202
+D Q +++ K++ ++ + +P+
Sbjct: 2165682 MDSTEPPYSQKRYEEIVKEVSTYIKKIGYNLDTVAFVPISGWNGGNMLEPSANMPWFKGW 2165503
Query: 203 -----------PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSIS 251
L+E L I PTR P + + + I G TV G + +G +
Sbjct: 2165502 KVTRKDGNASGTTLLEALDC-ILPPTRPTDKPLRLPLQDIYKIGGICTVPVGRVETGVLK 2165326
Query: 252 LGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303
G V + +VKS++M H ++ A+ GD +G V K + G V
Sbjct: 2165325 PGMVVTFAPVSFTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRHGNV 2165170
>gi|472268474|gb|KB716183.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01477, whole genome
shotgun sequence
Length = 666216
Score = 58.9 bits (141), Expect = 1e-06
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 25/241 (10%)
Frame = -1
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIAC 138
VT++D PGH I+ +I G D +L++ V+K QT L+ +
Sbjct: 475965 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGVSKNGQTHE-HALLAYTLGV 475789
Query: 139 QKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXX 196
++L+V +NK+D Q +++ K++ ++ + + +P+
Sbjct: 475788 KQLIVGVNKMDSAEPPYSQKRYEEIIKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPS 475609
Query: 197 XXXXXI--------------PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMT 242
L+E L I PTR P + + I G GTV
Sbjct: 475608 ANMPWFNGWKVTRKDGNASGTTLLEALDC-ILPPTRPTDRPLRPPLQDVYKIGGIGTVPV 475432
Query: 243 GTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGL 302
G + +G + G V + V +VKS++M H ++ A GD +G V K + G
Sbjct: 475431 GRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEARPGDNVGFNVKNVSVKDVRHGN 475252
Query: 303 V 303
V
Sbjct: 475251 V 475249
>gi|472269574|gb|KB715115.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00409, whole genome
shotgun sequence
Length = 1440520
Score = 53.5 bits (127), Expect = 4e-05
Identities = 49/234 (20%), Positives = 91/234 (38%), Gaps = 25/234 (10%)
Frame = +3
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIAC 138
+T++D PGH + +I G D +L++ ++K QT+ L+ +
Sbjct: 1093278 LTIIDAPGHRDFTKNMIAGTSQADCAVLIVAAGVGKFEAGISKNGQTRE-HALLAHTLGV 1093454
Query: 139 QKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPII--PVXXXXXXXXXXXX 196
++L+V +NK+D Q ++ K++ ++ + ++ P+
Sbjct: 1093455 KQLIVGVNKMDSTEPPYSQKRYKEIVKEVSTYIKKIGYNPDTVVFVPISGWNGDNMLEPS 1093634
Query: 197 XXXXXIP--------------ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMT 242
L+E L I PTR P + + + I G GTV
Sbjct: 1093635 ANMPWFKGWKVTRKDGNASGTTLLEALDC-ILPPTRPTDKPLRLPL*DVYKIGGIGTVPV 1093811
Query: 243 GTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPK 296
G + +G + V V +VKS++M H ++ A+ GD +G V K
Sbjct: 1093812 GRVKTGVLKPSMVVTFAPFNVTSEVKSVEMHHEALSEALPGDSVGFNVKNVSVK 1093973
>gi|472268785|gb|KB715872.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01166, whole genome
shotgun sequence
Length = 843213
Score = 50.4 bits (119), Expect = 3e-04
Identities = 52/238 (21%), Positives = 90/238 (37%), Gaps = 29/238 (12%)
Frame = +2
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIAC 138
VT+ D PGH I+ +I G +D +L++ + K QT L+ +A
Sbjct: 647936 VTITDAPGHGDFIKNMITGTSQVDCAVLIVAAGVGEFEAGIPKNGQTPE-HALLAYTLAV 648112
Query: 139 QKLVVVLNKIDL----LPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXX 194
++L+V +NK+D + + Q I +++ ++K N+ +P+
Sbjct: 648113 KQLIVGINKMDSSEPPYSQKRHQEIIKEVSTYIKKICYNSNI--VAFVPISGWNDDSSGW 648286
Query: 195 XXXXXXXI----------------PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQG 238
L+E L I PTR PF + + + I G G
Sbjct: 648287 NGAKC*DALVQGWKVTYKNDNASGTTLLEALDC-ILPPTRPTGKPFHLPLQDVYKIGGIG 648463
Query: 239 TVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPK 296
TV G + +G + G V L V ++ M H ++ + GD + V K
Sbjct: 648464 TVPVGQVETGVLKSGLVVTFTPLSVTTELSLMTFHHEALSKPLHGDNVSFNVKNVSVK 648637
>gi|472269749|gb|KB714940.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00234, whole genome
shotgun sequence
Length = 1901306
Score = 49.7 bits (117), Expect = 6e-04
Identities = 27/88 (30%), Positives = 43/88 (48%)
Frame = +1
Query: 216 PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHM 275
PTR P + + + I G GT+ G + +G + G V + V +VKS++M H
Sbjct: 74644 PTRPTDKPLRLPLQDVYKIGGIGTIPVGQVETGVLKPGMVVTFAPVNVTTEVKSVEMHHE 74823
Query: 276 PITSAMQGDRLGICVTQFDPKLLERGLV 303
++ A+ GD +G V K + RG V
Sbjct: 74824 ALSEALPGDNVGFNVKNVSVKDVRRGNV 74907
>gi|472269975|gb|KB714714.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00008, whole genome
shotgun sequence
Length = 7249611
Score = 49.3 bits (116), Expect = 8e-04
Identities = 31/99 (31%), Positives = 48/99 (48%)
Frame = -1
Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264
L+E L I +PTR P + + I G GTV G + +G + G V + V
Sbjct: 2742459 LLEALVC-ILLPTRPTDKPLHLPFQDVYEIGGIGTVPVGQVETGVLKPGMVVTFAPVNVT 2742283
Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303
++KS++M H ++ A+ GD +G V K + RG V
Sbjct: 2742282 TEIKSVEMHHEALSEALPGDNVGFNVKNVSVKDVCRGSV 2742166
Score = 36.2 bits (82), Expect = 6.8
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Frame = -2
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLV---------IDVTKGMQTQSAECLVIGQIAC 138
VT++D PGH I+ +I G D +L+ + ++K QT+ L+ +
Sbjct: 2742881 VTIIDAPGHRHFIKNMITGTSQADCAVLIVAAGVGEFEVGISKNGQTRE-HALLAYTLGI 2742705
Query: 139 QKLVVVLNKIDLLPEGKRQAAIDKMTKKM 167
++L+V +NK+D Q +++ K++
Sbjct: 2742704 KQLIVGVNKMDSTEPPYSQKRYEEIVKEV 2742618
>gi|472262679|gb|KB721978.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold08115, whole genome
shotgun sequence
Length = 5978
Score = 48.1 bits (113), Expect = 0.002
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 25/234 (10%)
Frame = +3
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVIDV---------TKGMQTQSAECLVIGQIAC 138
VT+ + GH I+ +I G D ++ +K QT+ + L+ +
Sbjct: 4623 VTITEASGHRDFIKNMIPGTSQADCAFPIVAAGVGEFEAGNSKNGQTRE-QALLAYTVGV 4799
Query: 139 QKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXX 196
++L+V +NK+D Q +++ K++ ++ + + +P+
Sbjct: 4800 KQLIVGVNKMDSPEPPYSQERYEEIVKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPS 4979
Query: 197 XXXXXIP--------------ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMT 242
L+E L I PTR P + + + I GTV
Sbjct: 4980 ANMPWFKGWKVTRKDGNASGTALLEALDC-ILPPTRPTDKPLHLPLQDVYKIGSIGTVPV 5156
Query: 243 GTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPK 296
G + +G + G V + V +VKS++M H ++ A+ GD +G V K
Sbjct: 5157 GRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDSVGFSVKNVSVK 5318
>gi|472269980|gb|KB714709.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00003, whole genome
shotgun sequence
Length = 11040149
Score = 47.8 bits (112), Expect = 0.002
Identities = 31/99 (31%), Positives = 48/99 (48%)
Frame = +2
Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264
L+E L I +PTR P + + I G GTV G + +G + G V + VV
Sbjct: 1033295 LLEALVC-ILLPTRPTDKPLHLPFQDVYEIGGIGTVPVG*VETGVLKPGMVVNFVPVNVV 1033471
Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303
+VK ++M H ++ A+ GD +G V K ++ G V
Sbjct: 1033472 TEVKFVEMHHEALSEALPGDNVGFNVKNVSVKDVQHGNV 1033588
>gi|472267331|gb|KB717326.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold02620, whole genome
shotgun sequence
Length = 370681
Score = 46.6 bits (109), Expect = 0.005
Identities = 53/259 (20%), Positives = 94/259 (36%), Gaps = 25/259 (9%)
Frame = +3
Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96
DK+ RERGIT+D+ F VT++D PGH
Sbjct: 245280 DKRKAERERGITIDISLWKFETS-------------------------KYYVTIIDAPGH 245384
Query: 97 ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
I+ +I G D +L++ ++K QT+ L+ + ++L+V +NK
Sbjct: 245385 RDFIKNMIPGTSQADCAVLIVAAGVGEFEAGISKNGQTRE-HALLAYTLGVKQLIVGVNK 245561
Query: 148 IDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXXI--- 202
+D Q +++ K++ ++ + + +P+
Sbjct: 245562 MDSTEPPYSQKRYEEIIKEVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGW 245741
Query: 203 -----------PELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSIS 251
L+E L I PTR P + + + I G GTV G + +G +
Sbjct: 245742 KVTRKDGNASGTTLLEALDC-ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 245918
Query: 252 LGDSVEIPALKVVKKVKSM 270
G V V +V+S+
Sbjct: 245919 PGMVVTFAPANVTTEVESL 245975
>gi|472266438|gb|KB718219.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold03513, whole genome
shotgun sequence
Length = 330677
Score = 45.8 bits (107), Expect = 0.009
Identities = 32/129 (24%), Positives = 52/129 (40%)
Frame = -3
Query: 216 PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHM 275
P P + + + I G GTV G + +G ++ G V + V +VKS++M H
Sbjct: 135369 PAHSTDKPLRLPLQDIYKIDGIGTVPVGGMETGVLTPGMMVTFAPVHVTTEVKSVEMHHE 135190
Query: 276 PITSAMQGDRLGICVTQFDPKLLERGLVCAPESLHTVHAALISVEKIPYFRGPLQTKAKF 335
++ A GD +G V K G V + A ++ P QT A +
Sbjct: 135189 ALSEAPPGDNVGFNVKNVSVKDARHGNVAGDSKNYPPREAAGFTAQVIILNHPGQTSA*Y 135010
Query: 336 HITVGHETV 344
+ + TV
Sbjct: 135009 APVLDYHTV 134983
>gi|472265732|gb|KB718925.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold04219, whole genome
shotgun sequence
Length = 142354
Score = 45.4 bits (106), Expect = 0.011
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = -2
Query: 216 PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHM 275
P R P + + + I G GTV G + +G + G V + V +VKS++M
Sbjct: 57720 PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTSEVKSVEMHRE 57541
Query: 276 PITSAMQGDRLGICVTQFDPKLLERGLV 303
++ A+ GD +G V K + RG V
Sbjct: 57540 ALSEALPGDHVGFNVKNVSVKDVRRGNV 57457
>gi|472269763|gb|KB714926.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00220, whole genome
shotgun sequence
Length = 2050639
Score = 45.4 bits (106), Expect = 0.011
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%)
Frame = +2
Query: 138 CQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRG-----API----------- 181
C+KL+V +NK+D Q +++ K++ ++ F PI
Sbjct: 1075982 CKKLIVGVNKMDSTEPPYSQKRYEEIIKEVSTYIKKLGFNANTTAFVPISGWNGDNMLEP 1076161
Query: 182 ---IPVXXXXXXXXXXXXXXXXXIPELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQG 238
+P +PE ++ + I PTR P + + + I G G
Sbjct: 1076162 GANMPWFKGWKITRKDGNASGTTLPEALDC--NCILSPTRPTEKPLHLPLQDVYKIGGIG 1076335
Query: 239 TVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGD 284
TV G + +G + G +V + V ++KS++M H ++ A+ GD
Sbjct: 1076336 TVPVGQVETGVLKPGMAVVFALVNVTTEIKSVEMHHEDLSEALPGD 1076473
>gi|472269385|gb|KB715304.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00598, whole genome
shotgun sequence
Length = 1266266
Score = 44.7 bits (104), Expect = 0.019
Identities = 28/97 (28%), Positives = 48/97 (49%)
Frame = +2
Query: 205 LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVV 264
L+E+L I + TR P + + + I G GTV G + +G + +V + V
Sbjct: 530801 LLEVLDC-ILLTTRSTDKPLRLPLQDIYRIGGIGTVPVG*VETGVLRSDMAVIFALVSVT 530977
Query: 265 KKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERG 301
+VKS++M H ++ A+ GD +G V + + RG
Sbjct: 530978 TEVKSVEMHHEALSKALPGDHVGFNVKNISVRDVRRG 531088
Score = 40.0 bits (92), Expect = 0.47
Identities = 23/86 (26%), Positives = 38/86 (44%)
Frame = -1
Query: 216 PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHM 275
PTR P + + + I G GTV G + +G + G V + V +VKS++M H
Sbjct: 897509 PTRPTDKPLHLPLQDVYRIVGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHE 897330
Query: 276 PITSAMQGDRLGICVTQFDPKLLERG 301
++ + D V + + RG
Sbjct: 897329 ALSEILSEDNASFNVKNVSVRDVRRG 897252
>gi|472269962|gb|KB714727.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00021, whole genome
shotgun sequence
Length = 4677693
Score = 44.7 bits (104), Expect = 0.019
Identities = 47/236 (19%), Positives = 88/236 (37%), Gaps = 25/236 (10%)
Frame = -1
Query: 93 CPGHASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVV 143
CPGH I+ +I G D +L++ ++K QT L+ + ++L+V
Sbjct: 2485848 CPGHRDFIKNMIAGTSQADCAVLIVAAGVGEFEPGISKNGQTYK-HALLAYTLGVKQLIV 2485672
Query: 144 VLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPI--IPVXXXXXXXXXXXXXXXXX 201
+NK+D Q +++ ++ ++ + + +P+
Sbjct: 2485671 GVNKMDSTEPPYSQKRYEEIITEVSTYIKKIGYNTNTVAFVPISGWNGDNMLEPSANMPW 2485492
Query: 202 IP--------------ELIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMTGTILS 247
L+E L I P P + + + I G GTV G + +
Sbjct: 2485491 FKGWKVTRKDGNASGTTLLEALDC-ILPPAHPTDKPLRLPLQDVYKIGGIGTVPVGRVET 2485315
Query: 248 GSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLV 303
+ G V + V +VKS++M ++ A+ GD +G V K + G V
Sbjct: 2485314 DVLKPGMVVTFAPVNVTSEVKSVEMHREALSEALPGDNVGFNVKNVSVKDVRCGNV 2485147
>gi|472269042|gb|KB715615.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00909, whole genome
shotgun sequence
Length = 850319
Score = 44.3 bits (103), Expect = 0.025
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +1
Query: 236 GQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQFDP 295
G GTV G + +G + G V + + +VKS++M H ++ A+ GD +G V
Sbjct: 142621 GIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSV 142800
Query: 296 KLLERGLVC 304
K + RG VC
Sbjct: 142801 KDIRRGNVC 142827
>gi|472269553|gb|KB715136.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00430, whole genome
shotgun sequence
Length = 1558576
Score = 44.3 bits (103), Expect = 0.025
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +3
Query: 216 PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHM 275
P R P + + + I G GTV G + +G + G V + V +VKS++M H
Sbjct: 989940 PARPTDKPLPLPLQDVYKIGGIGTVPVGQVETGVLKPGMVVTFAPVNVTTEVKSVEMHHE 990119
Query: 276 PITSAMQGDRLGICV 290
++ A+ GD +G V
Sbjct: 990120 AVSEALPGDNVGFNV 990164
>gi|472266960|gb|KB717697.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold02991, whole genome
shotgun sequence
Length = 314616
Score = 43.9 bits (102), Expect = 0.033
Identities = 50/182 (27%), Positives = 73/182 (40%), Gaps = 14/182 (7%)
Frame = +1
Query: 89 TLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKG-MQT------QSAECLVIGQIACQK- 140
T++D PGH S + +IGGA DL +LVI KG +T Q+ E ++ + A K
Sbjct: 15925 TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH 16104
Query: 141 LVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVXXXXXXXXXXXXXXXX 200
LVV++NK+D ++ +K+ L+ F I
Sbjct: 16105 LVVLINKMDDPTVNWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSD 16284
Query: 201 XIPELIELLTSQISIPTRDPSGPFLMSVDHCFSI------KGQGTVMTGTILSGSISLGD 254
P T IP D F S+D + K GTV+ G + SGSI G
Sbjct: 16285 FCP----WYTGLPFIPYLDNMPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQ 16452
Query: 255 SV 256
+
Sbjct: 16453 QL 16458
>gi|472269068|gb|KB715589.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00883, whole genome
shotgun sequence
Length = 912398
Score = 43.9 bits (102), Expect = 0.033
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 226 MSVDH--CFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQG 283
++ DH C G GTV G + +G + G V + +VKS++M H + A+ G
Sbjct: 749256 LAADHSGCSVPPGIGTVPVGRVETGFLKPGMVVTFAPCNITTEVKSVEMHHEALAEALPG 749435
Query: 284 DRLGICVTQFDPKLLERGLV 303
D +G V K + RG V
Sbjct: 749436 DNVGFNVKNVSVKAIRRGYV 749495
Score = 43.9 bits (102), Expect = 0.033
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 226 MSVDH--CFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQG 283
++ DH C G GTV G + +G + G V + +VKS++M H + A+ G
Sbjct: 766041 LAADHSGCSVPPGIGTVPVGRVETGFLKPGMVVTFAPCNITTEVKSVEMHHEALAEALPG 766220
Query: 284 DRLGICVTQFDPKLLERGLV 303
D +G V K + RG V
Sbjct: 766221 DNVGFNVKNVSVKAIRRGYV 766280
>gi|472269423|gb|KB715266.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00560, whole genome
shotgun sequence
Length = 1105260
Score = 43.1 bits (100), Expect = 0.056
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = -2
Query: 232 FSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVT 291
+ I G GTV G + +G + G V + V +VKS++M H ++ A+ GD +G V
Sbjct: 303335 YKIGGIGTVPVGRVETGVLKPGMVVTFAPVSVTTEVKSVEMHHEALSEALPGDNVGFSVK 303156
Query: 292 QFDPKLLERGLV 303
+ + RG V
Sbjct: 303155 NVSVRDVHRGSV 303120
>gi|472269875|gb|KB714814.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00108, whole genome
shotgun sequence
Length = 2680271
Score = 42.4 bits (98), Expect = 0.095
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +2
Query: 233 SIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPITSAMQGDRLGICVTQ 292
+I G GTV G + +G + G V + V +VKS++M H ++ A+ GD +G V
Sbjct: 1431941 NILGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKN 1432120
Query: 293 FDPKLLERGLV 303
K + RG V
Sbjct: 1432121 VSVKDVRRGNV 1432153
>gi|472269752|gb|KB714937.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00231, whole genome
shotgun sequence
Length = 2040769
Score = 41.2 bits (95), Expect = 0.21
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Frame = +3
Query: 208 LLTSQISI--PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVK 265
LL +Q I PT FL+ + + I G G + G I +G + LG P+L+
Sbjct: 177390 LLEAQYCILPPTYSTGKTFLLPLQDVYKIGGLGPISVG*IETGVLKLGRWS--PSLQSAL 177563
Query: 266 KVKSMQMFHMPITSAMQGDRLGI----CVTQFDP 295
+VKS+++ H ++ A+ GD+ G+ CV Q P
Sbjct: 177564 QVKSVKLHHNILSKALPGDKCGLQCQECVCQRYP 177665
>gi|472269770|gb|KB714919.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00213, whole genome
shotgun sequence
Length = 2032886
Score = 41.2 bits (95), Expect = 0.21
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = -1
Query: 216 PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHM 275
PTR P + + + I G GT+ G + +G + G V + V +V ++M H
Sbjct: 1017728 PTRPADKPLHLPLQDVYKIGGIGTIPVGRMETGILKPGMVVTFAPVNVTTEVTFVEMHHE 1017549
Query: 276 PITSAMQGDRLGICVTQFDPKLL 298
++ A+ GD +G V K+L
Sbjct: 1017548 ALSEALPGDNVGFNVKYVLSKML 1017480
>gi|472268979|gb|KB715678.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00972, whole genome
shotgun sequence
Length = 861638
Score = 40.8 bits (94), Expect = 0.28
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = -2
Query: 216 PTRDPSGPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHM 275
P P + + + I G GTV G + +G + G V + V +VKS++M H
Sbjct: 396280 PAYPTDRPLCLPLQDIYKIGGIGTVPVGRVETGVLKPGMVVTFALVNVSTEVKSVEMHHE 396101
Query: 276 PITSAMQGDRLGICV 290
++ A+ GD +G V
Sbjct: 396100 TLSEALLGDNVGFNV 396056
>gi|472269780|gb|KB714909.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00203, whole genome
shotgun sequence
Length = 1941613
Score = 40.8 bits (94), Expect = 0.28
Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 25/191 (13%)
Frame = +1
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIAC 138
VT++D PGH I+ +I G D +L++ ++K QT+ L+ +
Sbjct: 838384 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGDFEASISKNWQTRE-HALLAYTLGV 838560
Query: 139 QKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFR--GAPIIPVXXXXXXXXXXXX 196
++L+V +NK D Q +++ K++ ++ + +P+
Sbjct: 838561 KQLIVGVNKTDSTEPLYSQKRYEEIVKEVSTYIKKIGYNLDTVVFVPISGWNGDNMLEPS 838740
Query: 197 XXXXXIPE--------------LIELLTSQISIPTRDPSGPFLMSVDHCFSIKGQGTVMT 242
L+E L + PTR PF + + + I G GTV
Sbjct: 838741 ANMPWFKRWKVTCKDGNASGNTLLEALDCSLP-PTRPTDKPFCLPLQDIYKIGGIGTVPV 838917
Query: 243 GTILSGSISLG 253
G + +G + G
Sbjct: 838918 G*VETGILKPG 838950
>gi|472269074|gb|KB715583.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00877, whole genome
shotgun sequence
Length = 949696
Score = 38.5 bits (88), Expect = 1.4
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 9/140 (6%)
Frame = +1
Query: 37 DKQPQSRERGITLDLGFSCFSVPLPARLRSSXXXXXXXXXXXXXXXXXXXQVTLVDCPGH 96
DK RERGIT+D+ F VT++D PGH
Sbjct: 576589 DKLKAERERGITIDISLWKFETS-------------------------KYYVTIIDAPGH 576693
Query: 97 ASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIACQKLVVVLNK 147
+ ++ I G D +L++ ++K QT+ L+ + ++L+V +NK
Sbjct: 576694 RNFLKNTITGTSQADCAVLIVAAGVSEFEAGISKNGQTRE-HALLAYTLGAKQLIVGVNK 576870
Query: 148 IDLLPEGKRQAAIDKMTKKM 167
+D Q +++ K++
Sbjct: 576871 MDSTEPPYSQKRYEEIVKEV 576930
>gi|472269310|gb|KB715347.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00641, whole genome
shotgun sequence
Length = 1161464
Score = 38.5 bits (88), Expect = 1.4
Identities = 27/70 (38%), Positives = 33/70 (47%)
Frame = -2
Query: 504 VGLKVHLSTGELGIIDSAFGQSGKFKIHIPGGLSPESKKILTPALKKRARAGRGEATRQE 563
V LK H S+ D GQ G G PE+ + A K+ RA RG ATRQ
Sbjct: 351739 VVLKSHPSSASPRTRDIPHGQGG--------GSRPEAPGVKGGAGKRSIRAPRGRATRQS 351584
Query: 564 ESAERSEPSQ 573
AER+ P+Q
Sbjct: 351583 AKAERAHPTQ 351554
>gi|472269230|gb|KB715427.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00721, whole genome
shotgun sequence
Length = 1023103
Score = 36.6 bits (83), Expect = 5.2
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1
Query: 87 QVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECL 131
++T +D PGHA+ GAQ+ D+++LV+ G+ Q+ E +
Sbjct: 324889 KITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESI 324755
>gi|472269961|gb|KB714728.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00022, whole genome
shotgun sequence
Length = 4823392
Score = 36.6 bits (83), Expect = 5.2
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Frame = +2
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVI---------DVTKGMQTQSAECLVIGQIAC 138
VT++D PGH I+ +I G D +L++ ++K QT+ L+ +
Sbjct: 1312247 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE-HALLAYTLGV 1312423
Query: 139 QKLVVVLNKIDLLPEGKRQAAIDKMTKKM 167
++L+V +NK+D Q +++ K++
Sbjct: 1312424 KQLIVGVNKMDSTEPPYSQKRYEEIVKEV 1312510
>gi|472268428|gb|KB716229.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01523, whole genome
shotgun sequence
Length = 617746
Score = 35.8 bits (81), Expect = 8.9
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = -3
Query: 88 VTLVDCPGHASLIRTIIGGAQIIDLMMLVI 117
V+ VDCPGH L+ T++ GA ++D +L+I
Sbjct: 373250 VSFVDCPGHDILMATMLNGAAVMDAALLLI 373161
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge
nome.fa
Posted date: Oct 18, 2013 6:11 PM
Number of letters in database: 3,087,506,849
Number of sequences in database: 5788
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge
nome.fa.01
Posted date: Oct 18, 2013 6:11 PM
Number of letters in database: 69,379,310
Number of sequences in database: 10,922
Lambda K H
0.321 0.137 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,911,529,161
Number of Sequences: 16710
Number of extensions: 27207637
Number of successful extensions: 106941
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 350
Number of HSP's that attempted gapping in prelim test: 101228
Number of HSP's gapped (non-prelim): 17382
length of query: 596
length of database: 1,052,295,386
effective HSP length: 138
effective length of query: 458
effective length of database: 1,049,989,406
effective search space: 480895147948
effective search space used: 480895147948
frameshift window, decay const: 40, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)