TBLASTN 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SPP00000129_2.0 # Protein # Thioredoxin reductase 1 (TR1) #
Human (Homo sapiens)
(649 letters)
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/geno
me.fa
16,710 sequences; 3,156,886,159 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|472268805|gb|KB715852.1| Leptonychotes weddellii isolate WS11... 155 1e-35
gi|472267228|gb|KB717429.1| Leptonychotes weddellii isolate WS11... 140 3e-31
gi|472269750|gb|KB714939.1| Leptonychotes weddellii isolate WS11... 80 4e-22
gi|472266971|gb|KB717686.1| Leptonychotes weddellii isolate WS11... 85 2e-14
gi|472267774|gb|KB716883.1| Leptonychotes weddellii isolate WS11... 50 5e-04
gi|472269887|gb|KB714802.1| Leptonychotes weddellii isolate WS11... 49 9e-04
gi|472269680|gb|KB715009.1| Leptonychotes weddellii isolate WS11... 41 0.31
gi|472265061|gb|KB719596.1| Leptonychotes weddellii isolate WS11... 37 5.8
>gi|472268805|gb|KB715852.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01146, whole genome
shotgun sequence
Length = 801885
Score = 155 bits (391), Expect = 1e-35
Identities = 77/87 (88%), Positives = 80/87 (91%)
Frame = +3
Query: 330 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH 389
SDDLFSLPYCPGKTLVVGASYVALECAGFL GIGLDVTVMVRSILLRGFDQDMANKIGEH
Sbjct: 492126 SDDLFSLPYCPGKTLVVGASYVALECAGFLVGIGLDVTVMVRSILLRGFDQDMANKIGEH 492305
Query: 390 MEEHGIKFIRQFVPIKVEQIEAGTPGR 416
MEEHG+KFI+QFVPIKV +G GR
Sbjct: 492306 MEEHGVKFIKQFVPIKV----SGVAGR 492374
Score = 99.8 bits (247), Expect = 6e-19
Identities = 46/63 (73%), Positives = 51/63 (80%), Gaps = 5/63 (7%)
Frame = +2
Query: 244 VKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKAT-----NNKGK 298
VKHDW++M EAVQNHIGSLNWGYRVALREKKV YENA+GQF+GPHRIK GK
Sbjct: 490193 VKHDWNKMTEAVQNHIGSLNWGYRVALREKKVTYENAFGQFVGPHRIKVIV*LVWGRGGK 490372
Query: 299 EKI 301
EK+
Sbjct: 490373 EKV 490381
Score = 99.0 bits (245), Expect = 1e-18
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +3
Query: 462 KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVK 514
+TGKIPVTDEEQTNVPYIYAIGD+LE K+ELTPVAIQAGRLLAQRLYAGS VK
Sbjct: 500436 RTGKIPVTDEEQTNVPYIYAIGDVLEGKLELTPVAIQAGRLLAQRLYAGSNVK 500594
Score = 97.1 bits (240), Expect = 4e-18
Identities = 46/46 (100%), Positives = 46/46 (100%)
Frame = +1
Query: 583 ERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 628
ERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV
Sbjct: 513886 ERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 514023
Score = 82.8 bits (203), Expect = 7e-14
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = +1
Query: 204 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 242
GLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGW EE
Sbjct: 482602 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWNTEE 482718
Score = 79.3 bits (194), Expect = 8e-13
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +1
Query: 514 KCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 551
+CDYENVPTTVFTPLEYGACGLSEEKAVE FGEENIEV
Sbjct: 507886 QCDYENVPTTVFTPLEYGACGLSEEKAVETFGEENIEV 507999
Score = 78.2 bits (191), Expect = 2e-12
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3
Query: 292 ATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCIS 329
ATNNKGKEKIYSAERFLIATGERPRYL IPGD+EYCIS
Sbjct: 490698 ATNNKGKEKIYSAERFLIATGERPRYLDIPGDREYCIS 490811
Score = 74.7 bits (182), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 550 EVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDN 582
+VYHSYFWPLEWTIPSRD+NKCYAK+ICN KDN
Sbjct: 510225 QVYHSYFWPLEWTIPSRDSNKCYAKVICNIKDN 510323
Score = 62.8 bits (151), Expect = 8e-08
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 7/60 (11%)
Frame = +1
Query: 31 AKDHHPGKTLPENPA-------GFTSTATADSRALLQAYIDGHSVVIFSRSTCTRCTEVK 83
AKDH P + LPENPA G ++ + +D RA L+AYID H VVIFS+S C RC EV+
Sbjct: 432604 AKDHLPSQPLPENPATGVSGPSGPSNPSISDPRARLRAYIDSHPVVIFSKSMCKRCAEVR 432783
Score = 59.3 bits (142), Expect = 8e-07
Identities = 27/34 (79%), Positives = 33/34 (97%)
Frame = +3
Query: 404 IKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTV 437
++VEQIEAGTPGRLRV+A+ST+ +EIIEGEYNTV
Sbjct: 497709 LQVEQIEAGTPGRLRVIAKSTSCDEIIEGEYNTV 497810
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +3
Query: 102 EDGRALEGTLSELAAETDLPVVFVKQRKIGGHGPTLK 138
ED R LE LS+L +ETD+P+VFVK+RKIGGHGPTL+
Sbjct: 458721 EDARGLERALSQLTSETDVPLVFVKRRKIGGHGPTLR 458831
Score = 58.9 bits (141), Expect = 1e-06
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 139 AYQEGRLQKLLKMNGPEDLPKSYDYDLIII 168
AYQEGRLQKLLKMNG EDLP++YDYDLIII
Sbjct: 478454 AYQEGRLQKLLKMNGSEDLPEAYDYDLIII 478543
Score = 53.1 bits (126), Expect = 6e-05
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = +1
Query: 437 VMLAIGRDACTRKIGLETVGVKINEK 462
V+LAIGRDACTRKIGLETVGVKINEK
Sbjct: 498361 VLLAIGRDACTRKIGLETVGVKINEK 498438
Score = 42.0 bits (97), Expect = 0.14
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +3
Query: 627 EVFTTLSVTKRSGASILQAGCXG 649
+VFTTLSVTKRSG SILQAGC G
Sbjct: 522918 QVFTTLSVTKRSGGSILQAGC*G 522986
Score = 37.7 bits (86), Expect = 2.6
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 188 VMVLDFVTPTPLGTRWG 204
+MVLDFVTPTP GTRWG
Sbjct: 480532 IMVLDFVTPTPHGTRWG 480582
>gi|472267228|gb|KB717429.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold02723, whole genome
shotgun sequence
Length = 332153
Score = 140 bits (353), Expect = 3e-31
Identities = 64/77 (83%), Positives = 73/77 (94%)
Frame = +1
Query: 330 SDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEH 389
SDDLFSLPYCPGKTLVVGASYV LECAGFLAGIGLDVTVMVRS+LLRGFDQ+MA K+G +
Sbjct: 114523 SDDLFSLPYCPGKTLVVGASYVGLECAGFLAGIGLDVTVMVRSVLLRGFDQEMAEKVGSY 114702
Query: 390 MEEHGIKFIRQFVPIKV 406
ME+HG+KF+R+FVP+ V
Sbjct: 114703 MEQHGVKFLRKFVPVMV 114753
Score = 84.7 bits (208), Expect = 2e-14
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = +3
Query: 460 NEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDY 517
+ ++GKIPV D EQTNVPY+YA+GDILE K+ELTPVAIQAG+LLA+RL+AG K +
Sbjct: 125910 SNRSGKIPVNDVEQTNVPYVYAVGDILEGKLELTPVAIQAGKLLARRLFAGHLEKVSF 126083
Score = 84.7 bits (208), Expect = 2e-14
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1
Query: 584 RVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEV 628
RV+GFHVLGPNAGE+TQGFAAA+KCGLTK+ LD TIGIHP C EV
Sbjct: 146638 RVIGFHVLGPNAGEITQGFAAAMKCGLTKQLLDDTIGIHPTCGEV 146772
Score = 72.4 bits (176), Expect = 1e-10
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2
Query: 204 GLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEE 242
GLGGTCVNVGC+PKKLMHQAALLGQAL D+R +GW+ +
Sbjct: 104789 GLGGTCVNVGCVPKKLMHQAALLGQALSDARKFGWEYSQ 104905
Score = 72.4 bits (176), Expect = 1e-10
Identities = 29/49 (59%), Positives = 41/49 (83%)
Frame = +1
Query: 243 TVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIK 291
+V+H+W+ M EA+QN+IGSLNWG R++LREK V Y N+YG+F+ H+IK
Sbjct: 111424 SVRHNWETMTEAIQNYIGSLNWGCRLSLREKAVAYVNSYGEFVEHHKIK 111570
Score = 65.9 bits (159), Expect = 9e-09
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3
Query: 514 KCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEV 551
+CDY NVPTTVF PLEYG CGLSEEKA+E + +EN+EV
Sbjct: 129894 QCDYVNVPTTVFAPLEYGCCGLSEEKAIEVYKKENLEV 130007
Score = 65.5 bits (158), Expect = 1e-08
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +2
Query: 291 KATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDD 332
KATN KG+E Y+A +F++ATGERPRYLGI GDKEYCI+ D
Sbjct: 113276 KATNRKGQETYYTAAKFVLATGERPRYLGIQGDKEYCITR*D 113401
Score = 60.5 bits (145), Expect = 4e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 549 IEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNER 584
++VYH+ FWPLEWT+ RDNN CYAKIIC+ +N R
Sbjct: 144207 LQVYHTLFWPLEWTVAGRDNNTCYAKIICHKFNNVR 144314
Score = 49.3 bits (116), Expect = 9e-04
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +3
Query: 437 VMLAIGRDACTRKIGLETVGVKINEK 462
V+LAIGRD+CTRKIGLE +GVKINEK
Sbjct: 125247 VLLAIGRDSCTRKIGLEKIGVKINEK 125324
Score = 42.7 bits (99), Expect = 0.081
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +2
Query: 403 PIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTV 437
P V+Q+E G+PG+L+VVA+ST E IE YNTV
Sbjct: 115946 PY*VQQLEKGSPGKLKVVAKSTEGPEAIEEVYNTV 116050
>gi|472269750|gb|KB714939.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00233, whole genome
shotgun sequence
Length = 2014995
Score = 80.5 bits (197), Expect(2) = 4e-22
Identities = 38/100 (38%), Positives = 63/100 (63%)
Frame = -1
Query: 528 LEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVG 587
L +G GL+E++++ K+ +EN++ Y + F P+ + + ++ KC K++C T + E+VVG
Sbjct: 1204188 LLFGIVGLTEDESIYKY*KENVKTYSTTFTPI-YHVVTKKKTKCVMKMVCATAE-EKVVG 1204015
Query: 588 FHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAE 627
H G E+ QGFA A+K G TK D+T+ IHP +E
Sbjct: 1204014 IHTQGIGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSE 1203895
Score = 61.6 bits (148), Expect = 2e-07
Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 15/280 (5%)
Frame = -3
Query: 205 LGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNW 264
LG TCVNVGC+PKK+M + + + D +YG++ ++ K +W + E ++ LN
Sbjct: 1205170 LGSTCVNVGCVPKKVMWNTTVHSEFMHDHVDYGFQSCKS-KFNWHIIKEKRDAYLSCLNT 1204994
Query: 265 GYRVALREKKVVYENAYGQF---IGPHRIKATNNKGKEKIYSAERFLIATG---ERPRYL 318
Y+ L + + + F + P ++ NK Y+A LIATG P+
Sbjct: 1204993 IYQNNLTKSHIEIIQGHASFTCDLEP-TVEVNGNK-----YTASYILIATGGLPSCPQES 1204832
Query: 319 GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAG-FLAGIGLDVTVMVRSILLRG 377
IPG +SD L PG++++V + + G FL + +LR
Sbjct: 1204831 QIPG-ANLGKTSDGFSQLEELPGRSVIVVQATLL*R*LGFFLLWVQRHH**YRLDKVLRN 1204655
Query: 378 FDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAG--------TPGRLRVVAQSTNSEEI 429
FD +++ E +E GI+ ++ +V++ +G PGR ++
Sbjct: 1204654 FDSIISSNCTEELENSGIEVLKYSQVKEVKKTSSGLELCMIT*VPGRKPILTTIP----- 1204490
Query: 430 IEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVT 469
+ + ++ AIGRD + GV I K G P+T
Sbjct: 1204489 ---DVDCLLWAIGRDP-------NSSGV*I*TKWGFKPMT 1204400
Score = 50.4 bits (119), Expect(2) = 4e-22
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = -2
Query: 450 IGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLY- 508
+ L VG++ ++K G I V + + T+V IYA+GD+ K LTP AI AG LA RL
Sbjct: 1204436 LNLNKVGIQTDDK-GHIIVDEFQNTSVKGIYAVGDMCR-KALLTPGAIAAG*KLAHRLLE 1204263
Query: 509 AGSTVKCDYENVPTTVFT 526
K DY+N PT +F+
Sbjct: 1204262 CKEDSKLDYDNFPTVIFS 1204209
>gi|472266971|gb|KB717686.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold02980, whole genome
shotgun sequence
Length = 294865
Score = 84.7 bits (208), Expect = 2e-14
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = -3
Query: 196 PTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDW 248
P GTRWGLGGTCVNVGCIPKKLMHQAALLG ++D+ +YGW + + V HDW
Sbjct: 99992 PNMPGTRWGLGGTCVNVGCIPKKLMHQAALLGGMIRDATHYGWAI-QPVLHDW 99837
Score = 55.5 bits (132), Expect = 1e-05
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = -1
Query: 520 VPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRD 567
VPTTVFTPLEYG GLSEE+AV + GEE++EV P + +P RD
Sbjct: 67726 VPTTVFTPLEYGCVGLSEEEAVARHGEEHVEVRQG---PEDRGVPGRD 67592
Score = 54.3 bits (129), Expect = 3e-05
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -2
Query: 351 VALECAGFLAGIGLDVTVMVRSILLRGFDQ 380
VALECAGFL G+GLD TVM+RSI LRGFDQ
Sbjct: 83877 VALECAGFLTGLGLDTTVMIRSIPLRGFDQ 83788
Score = 49.3 bits (116), Expect = 9e-04
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = -1
Query: 442 GRDACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILE 487
GR TR + LE GVKIN + KI V +E T+VP+IYAIGD+ E
Sbjct: 71401 GRIPETRSLNLEKAGVKINPNSQKILVDAQETTSVPHIYAIGDVAE 71264
Score = 47.0 bits (110), Expect = 0.004
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = -3
Query: 570 KCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALK 607
+C +++C K + V+G H LGPNAGEVTQGFA +K
Sbjct: 65876 RCGFQMVCLRKPPQLVLGLHFLGPNAGEVTQGFALGIK 65763
Score = 44.3 bits (103), Expect = 0.028
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = -2
Query: 607 KCGLTKKQLDSTIGIHPVCAEVFTTLSVTKRSGASILQAGCXG 649
+CG + QL T+GIHP CAE L ++KRSG GC G
Sbjct: 64011 RCGASYVQLMQTVGIHPTCAEEVAKLRISKRSGLDPTVTGC*G 63883
Score = 38.1 bits (87), Expect = 2.0
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -3
Query: 251 MIEAVQNHIGSLNWGYRVALREK 273
M EAVQNH+ SLNWG+RV L+++
Sbjct: 99284 MAEAVQNHVKSLNWGHRVQLQDR 99216
Score = 37.4 bits (85), Expect = 3.4
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = -1
Query: 551 VYHSYFWPLEWTIPSRDNNKCYAKI 575
VYH+Y+ PLE+T+ RD ++CY K+
Sbjct: 66112 VYHAYYKPLEFTVAQRDASQCYIKV 66038
Score = 36.6 bits (83), Expect = 5.8
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -2
Query: 487 EDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENV 520
+ + ELTP A+ AG+LLA+RL S+ DY+NV
Sbjct: 68109 QGRPELTPTAVMAGKLLARRLCGQSSDVMDYDNV 68008
>gi|472267774|gb|KB716883.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold02177, whole genome
shotgun sequence
Length = 437307
Score = 50.1 bits (118), Expect = 5e-04
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = -1
Query: 585 VVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL 632
VVG H+ G E+ QGFA A+K G TK D+T+ IHP +E TL
Sbjct: 382068 VVGIHMQGIGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELVTL 381925
>gi|472269887|gb|KB714802.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00096, whole genome
shotgun sequence
Length = 2688311
Score = 49.3 bits (116), Expect = 9e-04
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Frame = +3
Query: 59 LQAYIDGHSVVIFSRSTCTRCTEVKKLFKSLCVPYFVLELDQTEDGRALEGTLSELAAET 118
LQ I + VVIFS+++C+ C KKLF + V Y V+ELD E G + L ++ E
Sbjct: 317622 LQETISDNCVVIFSKTSCSYCAMAKKLFHDINVKYKVVELDMLEYGSQFQDALYKMTGEK 317801
Query: 119 DLPV-VFVKQRKIGGHGPT--LKAYQEGRLQKLLKMNGPEDLPKSY 161
+ V V +IGG T L AY + L + E L +S+
Sbjct: 317802 TVSVSSMVLFLQIGGTWVT*SLDAYVK*ARHSLCLLRDRERL*ESF 317939
>gi|472269680|gb|KB715009.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00303, whole genome
shotgun sequence
Length = 1803839
Score = 40.8 bits (94), Expect = 0.31
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 495 VAIQAGRLLAQRLY-AGSTVKCDYENVPTTVFTPLEYGACGLSEEKAVE 542
VAI AGR LA RL+ K DY+N+PT VF+ G GL+E + ++
Sbjct: 1659133 VAIAAGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEGRCLK 1659279
Score = 37.0 bits (84), Expect = 4.4
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 524 VFTPLEYGACGLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNE 583
VF + C + E A+ K+G+EN++ Y + F P+ + R KC K++C T + E
Sbjct: 1660838 VFDRCFFSLCIIDE--AIYKYGKENVKTYSTTFTPMYHAVTKR-KTKCVMKMVCATAE-E 1661005
Query: 584 RVVG 587
+V G
Sbjct: 1661006 KVWG 1661017
>gi|472265061|gb|KB719596.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold04890, whole genome
shotgun sequence
Length = 108343
Score = 36.6 bits (83), Expect = 5.8
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -1
Query: 81 EVKKLFKSLCVPYFVLELDQ 100
+VKKLFKS+ VPYF+LELDQ
Sbjct: 1066 QVKKLFKSMRVPYFLLELDQ 1007
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge
nome.fa
Posted date: Oct 18, 2013 6:11 PM
Number of letters in database: 3,087,506,849
Number of sequences in database: 5788
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge
nome.fa.01
Posted date: Oct 18, 2013 6:11 PM
Number of letters in database: 69,379,310
Number of sequences in database: 10,922
Lambda K H
0.318 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,342,411,746
Number of Sequences: 16710
Number of extensions: 35146954
Number of successful extensions: 139985
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 317
Number of HSP's that attempted gapping in prelim test: 134129
Number of HSP's gapped (non-prelim): 18699
length of query: 649
length of database: 1,052,295,386
effective HSP length: 139
effective length of query: 510
effective length of database: 1,049,972,696
effective search space: 535486074960
effective search space used: 535486074960
frameshift window, decay const: 40, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)