Command line: [exonerate -m p2g --showtargetgff -q ./SelK.fa -t SelK.carpeta/genomic.fa]
Hostname: [ws101075]

C4 Alignment:
------------
         Query: SPP00000076_2.0 # Protein # Selenoprotein K (SelK) # Human (Homo sapiens)
        Target: gi|472268922|gb|KB715735.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold01029, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 464
   Query range: 0 -> 94
  Target range: 285998 -> 292194

      1 : MetValTyrIleSerAsn{G}  >>>> Target Intron 1 >>>>  {ly}GlnV :      9
          ||||||||||||||||||{|}           3851 bp           {||}||||
          MetValTyrIleSerAsn{G}++                         ++{ly}GlnV
 285999 : ATGGTTTACATCTCGAAT{G}gt.........................ag{GA}CAAG : 289874

     10 : alLeuAspSerArgSerGlnSerProTrpArgLeuSerLeuIleThrAspPhePheTr :     28
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          alLeuAspSerArgSerGlnSerProTrpArgLeuSerLeuIleThrAspPhePheTr
 289875 : TATTGGACAGCCGGAGTCAGTCCCCATGGAGATTATCTTTGATAACAGATTTCTTCTG : 289931

     29 : pGlyIleAlaGluPheValValLeu{Ph}  >>>> Target Intron 2 >>>>   :     37
          |||||||||||||||||||||||||{||}           1478 bp           
          pGlyIleAlaGluPheValValLeu{Ph}++                         ++
 289932 : GGGAATAGCAGAGTTTGTGGTTTTG{TT}gt.........................ag : 291436

     38 : {e}PheLysThrLeuLeuGlnGlnAspValLysLysArgArgSerTyrGlyAsnSerS :     56
          {|}|||||||||||||||||||||||||||||||||||||||.!!|||||||||||||
          {e}PheLysThrLeuLeuGlnGlnAspValLysLysArgArgGlyTyrGlyAsnSerS
 291437 : {T}TTCAAGACTCTGCTTCAGCAAGATGTGAAAAAGAGAAGAGGATATGGAAATTCCT : 291493

     57 : erAspSerArgTyrAspAspGlyArg{Gl}  >>>> Target Intron 3 >>>>  :     65
          ||||||||||||||||||||||||||{||}            585 bp          
          erAspSerArgTyrAspAspGlyArg{Gl}++                         +
 291494 : CTGATTCCAGATATGATGATGGAAGA{GG}gt.........................a : 292105

     66 :  {y}ProProGlyAsnProProArgArgMetGlyArgIleAsnHisLeuArgGlyPro :     83
           {|}||||||||||||||||||||||||||||||||||||||||||||||||||||||
          +{y}ProProGlyAsnProProArgArgMetGlyArgIleAsnHisLeuArgGlyPro
 292106 : g{G}CCACCAGGCAACCCTCCCAGAAGAATGGGTCGAATTAATCATCTACGTGGCCCT : 292159

     84 : SerProProProMetAlaGlyGlyUnkGlyArg :     94
          ||||||||||||||||||||||||   ||||||
          SerProProProMetAlaGlyGly***GlyArg
 292160 : AGTCCTCCTCCAATGGCTGGTGGATGAGGAAGG : 292194

vulgar: SPP00000076_2.0 0 94 . gi|472268922|gb|KB715735.1| 285998 292194 + 464 M 6 18 S 0 1 5 0 2 I 0 3847 3 0 2 S 1 2 M 29 87 S 0 2 5 0 2 I 0 1474 3 0 2 S 1 1 M 27 81 S 0 2 5 0 2 I 0 581 3 0 2 S 1 1 M 29 87
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2013-11-13
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	gene	285999	292194	464	+	.	gene_id 1 ; sequence SPP00000076_2.0 ; gene_orientation +
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	cds	285999	286017	.	+	.	
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	exon	285999	286017	.	+	.	insertions 0 ; deletions 0
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	splice5	286018	286019	.	+	.	intron_id 1 ; splice_site "GT"
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	intron	286018	289868	.	+	.	intron_id 1
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	splice3	289867	289868	.	+	.	intron_id 0 ; splice_site "AG"
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	cds	289869	289959	.	+	.	
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	exon	289869	289959	.	+	.	insertions 0 ; deletions 0
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	splice5	289960	289961	.	+	.	intron_id 2 ; splice_site "GT"
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	intron	289960	291437	.	+	.	intron_id 2
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	splice3	291436	291437	.	+	.	intron_id 1 ; splice_site "AG"
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	cds	291438	291521	.	+	.	
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	exon	291438	291521	.	+	.	insertions 0 ; deletions 0
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	splice5	291522	291523	.	+	.	intron_id 3 ; splice_site "GT"
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	intron	291522	292106	.	+	.	intron_id 3
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	splice3	292105	292106	.	+	.	intron_id 2 ; splice_site "AG"
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	cds	292107	292194	.	+	.	
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	exon	292107	292194	.	+	.	insertions 0 ; deletions 0
gi|472268922|gb|KB715735.1|	exonerate:protein2genome:local	similarity	285999	292194	464	+	.	alignment_id 1 ; Query SPP00000076_2.0 ; Align 285999 1 18 ; Align 289871 8 87 ; Align 291439 38 81 ; Align 292108 66 87
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis