Command line: [exonerate -m p2g --showtargetgff -q ./SelH.fa -t SelH.carpeta/genomic.fa]
Hostname: [ws101086]

C4 Alignment:
------------
         Query: SPP00000070_2.0 # Protein # Selenoprotein H (SelH) # Human (Homo sapiens)
        Target: gi|472269976|gb|KB714713.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00007, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 506
   Query range: 0 -> 122
  Target range: 3686643 -> 3686277

       1 : MetAlaProArgGlyArgLysArgLysAlaGluAlaAlaValValAlaValAlaGl :      19
           |||||| !!||||||||||||||||||||||||!.!||||||||||||!.!|||! 
           MetAlaSerArgGlyArgLysArgLysAlaGluValAlaValValAlaAlaAlaAl
 3686643 : ATGGCTTCCCGGGGCAGAAAGCGGAAGGCCGAAGTGGCGGTGGTCGCGGCGGCGGC : 3686589

      20 : uLysArgGluLysLeuAlaAsnGlyGlyGluGlyMetGluGluAlaThrValValI :      38
           !|||!:!||||||! !|||..!||| !!:!!!.!:!!|||!  |||||||||||||
           aLysGlnGluLysProAlaGlyGlyArgLysAlaValGluAlaAlaThrValValI
 3686588 : GAAACAGGAGAAGCCGGCGGGCGGCCGGAAGGCAGTGGAGGCCGCGACCGTCGTGA : 3686532

      39 : leGluHisCysThrSerUnkArgValTyrGlyArgAsnAlaAlaAlaLeuSerGln :      56
           |||||||||||||||||   ||||||||||||||||||||||||||||||||||||
           leGluHisCysThrSer***ArgValTyrGlyArgAsnAlaAlaAlaLeuSerGln
 3686531 : TCGAGCATTGCACGAGCTGACGCGTCTACGGGCGCAACGCCGCGGCCCTGAGCCAG : 3686478

      57 : AlaLeuArgLeuGluAlaProGluLeuProValLysValAsnProThrLysProAr :      75
           |||||||||||||||.!!|||||||||||||||:!!|||||||||.!!||||||||
           AlaLeuArgLeuGluThrProGluLeuProValGluValAsnProAlaLysProAr
 3686477 : GCGCTGCGCCTGGAGACCCCGGAGCTTCCGGTGGAGGTGAATCCTGCCAAGCCCCG : 3686421

      76 : gArgGlySerPheGluValThrLeuLeuArgProAspGlySerSerAlaGluLeuT :      94
           ||||||||||!!.|||||||||||||||||||||||||||||||||!.!|||||||
           gArgGlySerLeuGluValThrLeuLeuArgProAspGlySerSerValGluLeuT
 3686420 : GAGGGGCAGCTTGGAGGTGACGCTGCTGCGCCCGGACGGCAGCAGTGTGGAGCTCT : 3686364

      95 : rpThrGlyIleLysLysGlyProProArgLysLeuLysPheProGluProGlnGlu :     112
           |||||||||||:!!||||||||||||||||||||||||||||||||||||||||||
           rpThrGlyIleGlnLysGlyProProArgLysLeuLysPheProGluProGlnGlu
 3686363 : GGACTGGGATTCAGAAGGGGCCCCCACGCAAACTCAAGTTCCCTGAGCCTCAAGAG : 3686310

     113 : ValValGluGluLeuLysLysTyrLeuSer :     122
           ||||||:!!||||||||||||:!!||||||
           ValValLysGluLeuLysLysHisLeuSer
 3686309 : GTGGTGAAGGAGCTGAAGAAGCACCTTTCG : 3686278

vulgar: SPP00000070_2.0 0 122 . gi|472269976|gb|KB714713.1| 3686643 3686277 - 506 M 122 366
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2013-11-19
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|472269976|gb|KB714713.1|	exonerate:protein2genome:local	gene	3686278	3686643	506	-	.	gene_id 1 ; sequence SPP00000070_2.0 ; gene_orientation .
gi|472269976|gb|KB714713.1|	exonerate:protein2genome:local	cds	3686278	3686643	.	-	.	
gi|472269976|gb|KB714713.1|	exonerate:protein2genome:local	exon	3686278	3686643	.	-	.	insertions 0 ; deletions 0
gi|472269976|gb|KB714713.1|	exonerate:protein2genome:local	similarity	3686278	3686643	506	-	.	alignment_id 1 ; Query SPP00000070_2.0 ; Align 3686644 1 366
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis