TBLASTN 2.2.13 [Nov-27-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= SPP00000146_2.0 # Protein # tRNA Sec 1 associated protein 1
(SECp43) # Human (Homo sapiens)
(287 letters)
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/geno
me.fa
16,710 sequences; 3,156,886,159 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|472269979|gb|KB714710.1| Leptonychotes weddellii isolate WS11... 150 5e-61
gi|472269958|gb|KB714731.1| Leptonychotes weddellii isolate WS11... 159 2e-56
gi|472268851|gb|KB715806.1| Leptonychotes weddellii isolate WS11... 99 2e-19
gi|472269968|gb|KB714721.1| Leptonychotes weddellii isolate WS11... 76 2e-12
gi|472269948|gb|KB714741.1| Leptonychotes weddellii isolate WS11... 71 8e-11
gi|472268676|gb|KB715981.1| Leptonychotes weddellii isolate WS11... 69 3e-10
gi|472268859|gb|KB715798.1| Leptonychotes weddellii isolate WS11... 67 2e-09
gi|472266944|gb|KB717713.1| Leptonychotes weddellii isolate WS11... 65 4e-09
gi|472269502|gb|KB715187.1| Leptonychotes weddellii isolate WS11... 62 3e-08
gi|472269913|gb|KB714776.1| Leptonychotes weddellii isolate WS11... 60 1e-07
gi|472269532|gb|KB715157.1| Leptonychotes weddellii isolate WS11... 59 3e-07
gi|472269770|gb|KB714919.1| Leptonychotes weddellii isolate WS11... 59 4e-07
gi|472269962|gb|KB714727.1| Leptonychotes weddellii isolate WS11... 55 6e-06
gi|472268389|gb|KB716268.1| Leptonychotes weddellii isolate WS11... 53 2e-05
gi|472266974|gb|KB717683.1| Leptonychotes weddellii isolate WS11... 52 3e-05
gi|472268374|gb|KB716283.1| Leptonychotes weddellii isolate WS11... 51 7e-05
gi|472268112|gb|KB716545.1| Leptonychotes weddellii isolate WS11... 39 2e-04
gi|472269579|gb|KB715110.1| Leptonychotes weddellii isolate WS11... 49 3e-04
gi|472268608|gb|KB716049.1| Leptonychotes weddellii isolate WS11... 35 0.002
gi|472269048|gb|KB715609.1| Leptonychotes weddellii isolate WS11... 45 0.005
gi|472269921|gb|KB714768.1| Leptonychotes weddellii isolate WS11... 44 0.008
gi|471701503|gb|APMU01161251.1| Leptonychotes weddellii contig16... 42 0.042
gi|472269735|gb|KB714954.1| Leptonychotes weddellii isolate WS11... 42 0.042
gi|472267841|gb|KB716816.1| Leptonychotes weddellii isolate WS11... 41 0.094
gi|472269317|gb|KB715340.1| Leptonychotes weddellii isolate WS11... 38 0.61
gi|472269649|gb|KB715040.1| Leptonychotes weddellii isolate WS11... 38 0.61
gi|472269098|gb|KB715559.1| Leptonychotes weddellii isolate WS11... 37 1.4
gi|472269492|gb|KB715197.1| Leptonychotes weddellii isolate WS11... 37 1.8
gi|472269926|gb|KB714763.1| Leptonychotes weddellii isolate WS11... 37 1.8
gi|472269689|gb|KB715000.1| Leptonychotes weddellii isolate WS11... 35 3.9
gi|472269924|gb|KB714765.1| Leptonychotes weddellii isolate WS11... 35 3.9
gi|472268157|gb|KB716500.1| Leptonychotes weddellii isolate WS11... 35 5.2
gi|472269974|gb|KB714715.1| Leptonychotes weddellii isolate WS11... 35 5.2
gi|472268427|gb|KB716230.1| Leptonychotes weddellii isolate WS11... 34 8.8
>gi|472269979|gb|KB714710.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00004, whole genome
shotgun sequence
Length = 8850241
Score = 150 bits (378), Expect(2) = 5e-61
Identities = 87/168 (51%), Positives = 99/168 (58%)
Frame = -1
Query: 117 VKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
V ++PSC G KVVLDQTG+SKG+G ++ DELE+K+ LTECQG VGLGSKPV LS+AI K
Sbjct: 4588798 VSIHPSCWGDKVVLDQTGMSKGFGVMECMDELERKQTLTECQGTVGLGSKPVLLSMAITK 4588619
Query: 177 ASRVKPVEXXXXXXXXXXXXXXXXXXXXAQWGYDQNXXXXXXXXXXXXXXXXXMQTYEEV 236
S VKPVE W Y N QT EE
Sbjct: 4588618 VSPVKPVEYNQMCI*SSCQLQEYQSC--V*WRYG*NTGNNRYSYSPNGYPQSTTQT*EEA 4588445
Query: 237 GDDALEDPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIP 284
GD+A +P PQL V EANKEFMEQ+EEL DALMDC W L VSSE P
Sbjct: 4588444 GDNAPSNPRPQLGVAEANKEFMEQNEELCDALMDCPW*SLHIVSSESP 4588301
Score = 109 bits (272), Expect(2) = 5e-61
Identities = 56/74 (75%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = -2
Query: 41 TGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFV 100
TGIPAGYC VE D ATAE LHKINGK LPGATPAK FK+N A YGK PDNSP YS F+
Sbjct: 4589028 TGIPAGYCSVECIDWATAEMSLHKINGKHLPGATPAKHFKVNSAAYGK*PDNSPMYSPFL 4588849
Query: 101 G-DLTPDVDDGMLY 113
G LTPDVD GMLY
Sbjct: 4588848 GRRLTPDVDGGMLY 4588807
>gi|472269958|gb|KB714731.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00025, whole genome
shotgun sequence
Length = 4497805
Score = 159 bits (401), Expect(2) = 2e-56
Identities = 81/109 (74%), Positives = 90/109 (82%)
Frame = -3
Query: 76 AKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGV 135
AK FKLNYAT GK PDN+PEY LFVGDLT VDD MLYEFF+KVYPS GGKV+LD GV
Sbjct: 3261476 AKHFKLNYATSGK*PDNNPEYFLFVGDLTLVVDDNMLYEFFIKVYPSY*GGKVILD*IGV 3261297
Query: 136 SKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVKPVE 184
S YGFVK TD+LEQK ALT+CQGAVGLG KPV+LS+AI KASR+ +E
Sbjct: 3261296 SNNYGFVKITDDLEQK*ALTDCQGAVGLGPKPVQLSMAILKASRMMSLE 3261150
Score = 104 bits (260), Expect = 5e-21
Identities = 53/74 (71%), Positives = 59/74 (79%)
Frame = -2
Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
M A L M +LEP M+ENFISRA ATM +TVMSVKII+N LTGI AGYCFV F DLA A++
Sbjct: 3261843 MVAILCMNELEPCMNENFISRASATMEDTVMSVKIIQNHLTGISAGYCFVGFGDLAIAKR 3261664
Query: 61 CLHKINGKPLPGAT 74
CLHKI GKPLP T
Sbjct: 3261663 CLHKIIGKPLPEPT 3261622
Score = 85.1 bits (209), Expect(2) = 2e-56
Identities = 46/83 (55%), Positives = 52/83 (62%)
Frame = -2
Query: 205 AQWGYDQNXXXXXXXXXXXXXXXXXMQTYEEVGDDALEDPMPQLDVTEANKEFMEQSEEL 264
AQW DQN M YEEV DD L+DPM +DV EAN+EFMEQ +EL
Sbjct: 3261084 AQW--DQNTRSYSFGYPLYGYTQSTM*RYEEVRDDTLKDPMS*MDVIEANEEFMEQRKEL 3260911
Query: 265 YDALMDCHWQPLDTVSSEIPAMM 287
+ALM+CHWQ LDTVSSE P MM
Sbjct: 3260910 *EALMECHWQLLDTVSSETPTMM 3260842
>gi|472268851|gb|KB715806.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01100, whole genome
shotgun sequence
Length = 836992
Score = 99.4 bits (246), Expect = 2e-19
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3
Query: 240 ALEDPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM 287
+L DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM
Sbjct: 393693 SLADPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIPAMM 393836
Score = 96.7 bits (239), Expect = 1e-18
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +2
Query: 93 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK 137
SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK
Sbjct: 386159 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSK 386293
Score = 83.6 bits (205), Expect = 1e-14
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 137 KGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 177
+GYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA
Sbjct: 387528 RGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKA 387650
Score = 76.6 bits (187), Expect = 2e-12
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +3
Query: 40 LTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAK 77
L+ IPAGYCFVEFADLATAEKCLHKINGKPLPGATP +
Sbjct: 383508 LSRIPAGYCFVEFADLATAEKCLHKINGKPLPGATPVR 383621
Score = 68.2 bits (165), Expect = 5e-10
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +3
Query: 10 LEPYMDENFISRAFATMGETVMSVKIIRNRLTG 42
LEPYMDENFISRAFATMGETVMSVKIIRNRLTG
Sbjct: 378858 LEPYMDENFISRAFATMGETVMSVKIIRNRLTG 378956
Score = 40.4 bits (93), Expect = 0.12
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 76 AKRFKLNYATYGKQPDN 92
AKRFKLNYATYGKQPDN
Sbjct: 384231 AKRFKLNYATYGKQPDN 384281
>gi|472269968|gb|KB714721.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00015, whole genome
shotgun sequence
Length = 6118819
Score = 76.3 bits (186), Expect = 2e-12
Identities = 51/159 (32%), Positives = 85/159 (53%)
Frame = +2
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
ASL++GDL + E+ + + F+T+G V+S++I R+ +T GY +V F LA A+K L
Sbjct: 4052564 ASLYVGDLNADVTEDLLFKKFSTVG-PVLSIRICRDLVTRRSLGYAYVNFLKLADAQKAL 4052740
Query: 63 HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122
+N + G K +L ++ S ++F+ +L +D+ LYE F +
Sbjct: 4052741 DTMNFDMIKG----KPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHF-SAFGK 4052905
Query: 123 CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAV 161
KV+ D G S+GY FV F +++ RA+ E GA+
Sbjct: 4052906 ILSSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGAL 4053019
Score = 54.7 bits (130), Expect = 6e-06
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Frame = +2
Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
++++ +L+ +D + F+ G+ ++S K++ + GY FV F + A++ +
Sbjct: 4052831 NVFIKNLDKSIDNKTLYEHFSAFGK-ILSSKVMSDDQGS--RGYAFVHFQNQIAADRAIE 4053001
Query: 64 KINGKPLPGATP-AKRFKLNYATYGKQPDNSPEYS-LFVGDLTPDVDDGMLYEFFVKVYP 121
++NG L RFK + + E++ +++ + D+DD L E F K Y
Sbjct: 4053002 EMNGALLKDCRLFVGRFKNRKDREAELQNKVNEFTNVYIKNFGDDMDDERLKEAFSK-YG 4053178
Query: 122 SCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
KV+ D +G SKG+GFV F K+A+ E G
Sbjct: 4053179 KTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNG 4053292
>gi|472269948|gb|KB714741.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00035, whole genome
shotgun sequence
Length = 3945147
Score = 70.9 bits (172), Expect = 8e-11
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = -2
Query: 234 EEVGDDALEDPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIP 284
E+ +D LEDP +++ E NKEFM +SEELYD+LM CHWQ LDTV SEIP
Sbjct: 2039603 EKQDEDPLEDPNLHVNIEELNKEFMMKSEELYDSLMSCHWQSLDTVHSEIP 2039451
>gi|472268676|gb|KB715981.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01275, whole genome
shotgun sequence
Length = 672995
Score = 68.9 bits (167), Expect = 3e-10
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = -1
Query: 234 EEVGDDALEDPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIP 284
E+ +D LEDP L++ E NK+FM +S+ELYD+LM CHWQPLD V S+IP
Sbjct: 654089 EKQDEDPLEDPKLHLNIEELNKDFMVKSKELYDSLMSCHWQPLDIVHSKIP 653937
>gi|472268859|gb|KB715798.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01092, whole genome
shotgun sequence
Length = 785425
Score = 66.6 bits (161), Expect = 2e-09
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +2
Query: 243 DPMPQLDVTEANKEFMEQSEELYDALMDCHWQPLDTVSSEIP 284
DP +++ E NKEFM +SEELYD+LM CHWQPLDTV SEIP
Sbjct: 500117 DPNLHVNIEELNKEFMMKSEELYDSLMSCHWQPLDTVHSEIP 500242
>gi|472266944|gb|KB717713.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold03007, whole genome
shotgun sequence
Length = 283262
Score = 65.5 bits (158), Expect = 4e-09
Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 6/183 (3%)
Frame = -1
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEF-----ADLAT 57
A++++G L+ + E + F G V++ + ++R+TG GY FVEF AD A
Sbjct: 157952 ATVYVGGLDEKVSEPLLWELFLQAGP-VVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAI 157776
Query: 58 AEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFV 117
+ K+ GKP+ ++N A+ K D ++F+G L P+ D+ +LY+ F
Sbjct: 157775 KIMNMIKLYGKPI---------RVNKASAHKNLDVGA--NIFIGSLDPETDEKLLYDTFS 157629
Query: 118 KVYPSCRGGKVVL-DQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
+ K++ TG SKGY F+ F + A TE L ++P+ +S A K
Sbjct: 157628 AFGVILQTPKIMWGPDTGSSKGYAFINFA-SFDASDAATEAMNGQYLCNRPITVSCAFKK 157452
Query: 177 ASR 179
S+
Sbjct: 157451 DSK 157443
Score = 42.4 bits (98), Expect = 0.032
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -1
Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
+ A++++G L+P DE + F+ G + + KI+ TG GY F+ FA ++
Sbjct: 157700 VGANIFIGSLDPETDEKLLYDTFSAFGVILQTPKIMWGPDTGSSKGYAFINFASFDASDA 157521
Query: 61 CLHKINGKPL 70
+NG+ L
Sbjct: 157520 ATEAMNGQYL 157491
>gi|472269502|gb|KB715187.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00481, whole genome
shotgun sequence
Length = 1367268
Score = 62.4 bits (150), Expect = 3e-08
Identities = 42/157 (26%), Positives = 77/157 (49%)
Frame = -3
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
ASL++GDL P + E + F+ G ++S++I R+++T GY +V + A++ L
Sbjct: 1282969 ASLYVGDLHPEVTEAMLYEKFSPAGP-ILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 1282793
Query: 63 HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122
+N + G + ++ ++ S ++F+ +L +D+ LY F + +
Sbjct: 1282792 ETLNFDVIKG----RPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIF-SAFGN 1282628
Query: 123 CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
KV D+ G KGYGFV F + +RA+ G
Sbjct: 1282627 ILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNG 1282520
Score = 62.4 bits (150), Expect = 3e-08
Identities = 42/157 (26%), Positives = 77/157 (49%)
Frame = +3
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
ASL++GDL P + E + F+ G ++S++I R+++T GY +V + A++ L
Sbjct: 1148433 ASLYVGDLHPEVTEAMLYEKFSPAGP-ILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 1148609
Query: 63 HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPS 122
+N + G + ++ ++ S ++F+ +L +D+ LY F + +
Sbjct: 1148610 ETLNFDVIKG----RPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIF-SAFGN 1148774
Query: 123 CRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
KV D+ G KGYGFV F + +RA+ G
Sbjct: 1148775 ILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNG 1148882
Score = 41.6 bits (96), Expect = 0.055
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = -3
Query: 94 PEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKR 152
P SL+VGDL P+V + MLYE F P ++ D+ T S GY +V + ++ KR
Sbjct: 1282975 PMASLYVGDLHPEVTEAMLYEKFSPAGP-ILSIRICRDKITRRSLGYAYVNYQQPVDAKR 1282799
Query: 153 ALTECQGAVGLGSKPVRL 170
AL V + +PVR+
Sbjct: 1282798 ALETLNFDV-IKGRPVRI 1282748
Score = 41.6 bits (96), Expect = 0.055
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 94 PEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKR 152
P SL+VGDL P+V + MLYE F P ++ D+ T S GY +V + ++ KR
Sbjct: 1148427 PMASLYVGDLHPEVTEAMLYEKFSPAGP-ILSIRICRDKITRRSLGYAYVNYQQPVDAKR 1148603
Query: 153 ALTECQGAVGLGSKPVRL 170
AL V + +PVR+
Sbjct: 1148604 ALETLNFDV-IKGRPVRI 1148654
>gi|472269913|gb|KB714776.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00070, whole genome
shotgun sequence
Length = 3717800
Score = 60.1 bits (144), Expect = 1e-07
Identities = 46/159 (28%), Positives = 78/159 (49%)
Frame = +3
Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
+ A+L++GDL+P + E+ + + F G + +I R+ +T P GY +V F A AE
Sbjct: 3462594 LKAALYVGDLDPDVTEDMLYKKFRPAG-PLRFTRICRDPVTRSPLGYGYVNFRFPADAEW 3462770
Query: 61 CLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
L+ +N + G K F+L ++ + S ++F+ +L +D+ L+ F +
Sbjct: 3462771 ALNTMNFDLING----KPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLF-SAF 3462935
Query: 121 PSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQG 159
+ KVV D G SKGY +V F RA+ G
Sbjct: 3462936 GNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNG 3463049
Score = 53.1 bits (126), Expect = 2e-05
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 4/155 (2%)
Frame = +3
Query: 4 SLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLH 63
++++ +L+ +D + F+ G ++S K++ + GY +V F LA A + +
Sbjct: 3462867 NIFIKNLDKSIDNRALFYLFSAFGN-ILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIW 3463037
Query: 64 KINGKPLPGATP-AKRFKL--NYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
+NG L RFK A + D + ++FV + D+DD L E F
Sbjct: 3463038 HMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNFGDDMDDEKLKEIFSGYG 3463217
Query: 121 PSCRGGKVVLDQTGVSKGYGFVKF-TDELEQKRAL 154
P+ KV+ D +G SKG+GFV++ T E QK L
Sbjct: 3463218 PT-ESVKVIRDASGKSKGFGFVRYETHEAAQKAVL 3463319
Score = 36.2 bits (82), Expect = 2.3
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 97 SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALT 155
+L+VGDL PDV + MLY+ F P R ++ D T GYG+V F + + AL
Sbjct: 3462603 ALYVGDLDPDVTEDMLYKKFRPAGP-LRFTRICRDPVTRSPLGYGYVNFRFPADAEWALN 3462779
Query: 156 ECQGAVGLGSKPVRLSVAIP 175
+ + KP RL + P
Sbjct: 3462780 TMNFDL-INGKPFRLMWSQP 3462836
>gi|472269532|gb|KB715157.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00451, whole genome
shotgun sequence
Length = 1220489
Score = 59.3 bits (142), Expect = 3e-07
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 6/185 (3%)
Frame = -3
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEF-----ADLAT 57
A++ + L+ + E + F G V++ + ++R+TG GY FV+F AD A
Sbjct: 622449 ATVHVRGLDEKVSEPLLWELFLQAGP-VVNTHMPKDRVTGKHQGYGFVKFLSEEDADYAI 622273
Query: 58 AEKCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFV 117
+ K+ GKP+ ++N A+ K D ++F+G+L P++D+ +LY+ F
Sbjct: 622272 KVMNMIKLYGKPI---------QVNKASAHKNLDVGA--NIFIGNLDPEIDEKLLYDTFG 622126
Query: 118 KVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
+ K++ D TG SKGY F+ F + A E L + P+ +S A K
Sbjct: 622125 AFGVILQTPKIMRDPDTGNSKGYAFINFA-SFDAPDAAIEAMNGQYLCNGPITVSYAFKK 621949
Query: 177 ASRVK 181
S+ K
Sbjct: 621948 DSKGK 621934
Score = 47.8 bits (112), Expect = 8e-04
Identities = 25/98 (25%), Positives = 48/98 (48%)
Frame = -3
Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
+ A++++G+L+P +DE + F G + + KI+R+ TG GY F+ FA +
Sbjct: 622197 VGANIFIGNLDPEIDEKLLYDTFGAFGVILQTPKIMRDPDTGNSKGYAFINFASFDAPDA 622018
Query: 61 CLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSL 98
+ +NG+ L + + GK+ ++ E L
Sbjct: 622017 AIEAMNGQYLCNGPITVSYAFKKDSKGKRHGSAAEQLL 621904
>gi|472269770|gb|KB714919.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00213, whole genome
shotgun sequence
Length = 2032886
Score = 58.5 bits (140), Expect = 4e-07
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Frame = -1
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
A++++G LE + E + F G V++ + ++R+T GY FVEF A+ +
Sbjct: 1127528 ATVYVGGLEEKVSEPLLWELFLQAGP-VVNTYVPKDRVTSQHQGYGFVEFLSEKDADYSI 1127352
Query: 63 HKINGKPLPGATPAKRFKLNYAT-YGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYP 121
+N L G K ++N A+ + K D ++F+G+L P++D+ +LY+
Sbjct: 1127351 KIMNMIKLYG----KPIRVNKASAHNKNLDVGA--NIFIGNLDPEIDEKLLYDTLSAFGV 1127190
Query: 122 SCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179
+ K++ D TG SKGY F+ FT + A E L + P+ + A K S+
Sbjct: 1127189 ILQTPKIMQDPDTGNSKGYAFINFT-SFDASGAAIEAMNGQYLCNCPITVFYAFKKDSK 1127016
Score = 40.8 bits (94), Expect = 0.094
Identities = 18/70 (25%), Positives = 38/70 (54%)
Frame = -1
Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
+ A++++G+L+P +DE + + G + + KI+++ TG GY F+ F +
Sbjct: 1127273 VGANIFIGNLDPEIDEKLLYDTLSAFGVILQTPKIMQDPDTGNSKGYAFINFTSFDASGA 1127094
Query: 61 CLHKINGKPL 70
+ +NG+ L
Sbjct: 1127093 AIEAMNGQYL 1127064
>gi|472269962|gb|KB714727.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00021, whole genome
shotgun sequence
Length = 4677693
Score = 54.7 bits (130), Expect = 6e-06
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Frame = +2
Query: 4 SLWMGDLEPY----MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAE 59
S W G+ + + N + E +K+ +N+ G GY F+EFA A+
Sbjct: 924479 SSWSGESKTLVLSSLSYNATEETLQEVFEKATFIKVPQNQ-NGKSKGYAFIEFASFEDAK 924655
Query: 60 KCLHKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV 119
+ L+ N + + G A R +L + + P +LFV L+ D + L E F
Sbjct: 924656 EALNSCNKREIEGR--AIRLELQGPSGSSNARSQPSKTLFVKGLSEDTTEETLKESFDD- 924826
Query: 120 YPSCRGGKVVLDQTGVSKGYGFVKFTDELEQK 151
S R V +TG SKG+GFV F E + K
Sbjct: 924827 --SVRARTVTDWETGSSKGFGFVDFNSEEDAK 924916
Score = 41.2 bits (95), Expect = 0.072
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 6/143 (4%)
Frame = +2
Query: 42 GIPAGYCFVEFADLATAEKCLHKINGKPLPGAT-----PAKRFKLNYATYGKQPDNSPEY 96
G G ++EF A AEK L + G + G ++ + + + GK S E
Sbjct: 924320 GKSKGIAYIEFKTEADAEKALEEKQGTEIDGRAISLFYTGEKGQSHDSRGGKNSSWSGES 924499
Query: 97 -SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALT 155
+L + L+ + + L E F K KV +Q G SKGY F++F + K AL
Sbjct: 924500 KTLVLSSLSYNATEETLQEVFEKATFI----KVPQNQNGKSKGYAFIEFASFEDAKEALN 924667
Query: 156 ECQGAVGLGSKPVRLSVAIPKAS 178
C + + +RL + P S
Sbjct: 924668 SCNKR-EIEGRAIRLELQGPSGS 924733
>gi|472268389|gb|KB716268.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01562, whole genome
shotgun sequence
Length = 656856
Score = 52.8 bits (125), Expect = 2e-05
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 95 EYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRA 153
++ +F GDL +V+D +L F + +PS KV+ D+ TG +KGYGFV F D + RA
Sbjct: 320310 DFRIFCGDLGNEVNDDILARAFSR-FPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDYVRA 320486
Query: 154 LTECQGAVGLGSKP 167
+ E G GL P
Sbjct: 320487 MREMNGG*GLSQGP 320528
>gi|472266974|gb|KB717683.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold02977, whole genome
shotgun sequence
Length = 304019
Score = 52.4 bits (124), Expect = 3e-05
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Frame = +1
Query: 46 GYCFVEF-----ADLATAEKCLHKINGKPLPGATPAKRFKLNYAT-YGKQPDNSPEYSLF 99
GY FVEF AD A + K+ GKP+ ++N A+ + K D ++F
Sbjct: 292396 GYGFVEFLSEEDADYAIKIMNMIKLYGKPI---------RVNKASAHNKNLDVGA--NIF 292542
Query: 100 VGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQ 158
+G+L P++D+ +LY+ F + K++ D TG SKGY F+ F + A E
Sbjct: 292543 IGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFA-SFDASDAAIEAM 292719
Query: 159 GAVGLGSKPVRLSVAIPKASR 179
L ++P+ +S A K S+
Sbjct: 292720 NGQYLCNRPITVSYAFKKDSK 292782
Score = 47.8 bits (112), Expect = 8e-04
Identities = 21/70 (30%), Positives = 41/70 (58%)
Frame = +1
Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
+ A++++G+L+P +DE + F+ G + + KI+R+ TG GY F+ FA ++
Sbjct: 292525 VGANIFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDA 292704
Query: 61 CLHKINGKPL 70
+ +NG+ L
Sbjct: 292705 AIEAMNGQYL 292734
>gi|472268374|gb|KB716283.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01577, whole genome
shotgun sequence
Length = 660282
Score = 51.2 bits (121), Expect = 7e-05
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Frame = -2
Query: 30 VMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL----HKINGKPLPGATPAKRFKLNYAT 85
V+ + + +TG G+ FV F D A+ +K L HK++GK + KR K A
Sbjct: 438788 VVDCTVKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLID----PKRAK---AL 438630
Query: 86 YGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKF 144
GK+P +FVG L+PD + + E+F + ++ +D +T +G+ F+ +
Sbjct: 438629 KGKEPPQK----VFVGGLSPDTSEEQIKEYF-GAFGEIENIELPMDTKTNDRRGFCFITY 438465
Query: 145 TDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
TDE K+ L +G G + VA PK
Sbjct: 438464 TDEEPVKKLLESRYHQIGSGK--CEIKVAQPK 438375
>gi|472268112|gb|KB716545.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01839, whole genome
shotgun sequence
Length = 532170
Score = 38.9 bits (89), Expect(2) = 2e-04
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Frame = +3
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
A++++G L+ + E + F G V+++ + ++R+TG Y FVEF AE +
Sbjct: 54705 ATVYVGSLDEKVSEPLLWELFLQAGP-VVNIHMPKDRVTGQHQDYGFVEFLSEEDAEYAI 54881
Query: 63 HKIN-----GKPLPGATPAKRFKLNYA-TYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFF 116
+N GKP+ ++N A T+ K D + +F+G+L ++ + +LY+ F
Sbjct: 54882 KIMNIIKPYGKPI---------QVNKASTHNKNLDVGAD--IFIGNLDLEIGEKLLYDTF 55028
Score = 30.0 bits (66), Expect(2) = 2e-04
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 127 KVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179
K++ D TG SKGY F+ F + A TE L + P+ +S A K S+
Sbjct: 55088 KIMWDPDTGNSKGYAFINFA-SFDALHAATEAMNGQYLCNLPITVSYAFKKNSK 55246
>gi|472269579|gb|KB715110.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00404, whole genome
shotgun sequence
Length = 1677573
Score = 48.9 bits (115), Expect = 3e-04
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Frame = +1
Query: 5 LWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL-- 62
+++G L + + + GE V+ + + +T G+ FV F D A+ +K L
Sbjct: 977698 MFVGGLSWDTSKKDLPEYLSRFGE-VVDCTVKTDPVTRRSRGFGFVLFKDAASVDKVLEL 977874
Query: 63 --HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVY 120
HK++GK + KR K A GK+P +FVG L+PD + + E+F +
Sbjct: 977875 KEHKLDGKLID----PKRAK---ALKGKEPPKK----VFVGGLSPDTSEEQIKEYF-GAF 978018
Query: 121 PSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPK 176
++ +D +T +G+ F+ +TDE K+ L +G G + VA PK
Sbjct: 978019 GEIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGK--CEIKVAQPK 978183
>gi|472268608|gb|KB716049.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01343, whole genome
shotgun sequence
Length = 749056
Score = 35.4 bits (80), Expect = 3.9
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Frame = -1
Query: 69 PLPGATPAKRFKLNYATYGKQPDNSPEY---SLFVGDLTPDVDDGMLYEFFVKVYPSCRG 125
P P PA + + ++P Y SL+VGDL PDV + MLY+ K P+
Sbjct: 571348 PAPAPGPALALLRPAGSRAEMNPSAPSYPMASLYVGDLHPDVTEAMLYQ---KCSPA--- 571187
Query: 126 GKVVLDQ------TGVSKGYGFVKFTDELEQKRAL 154
G ++ Q + S GY V F + +RAL
Sbjct: 571186 GPILFIQVCRDMISRRSLGYAHVNFQRPADAERAL 571082
Score = 35.0 bits (79), Expect(2) = 0.002
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = -1
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
ASL++GDL P + E + + + G ++ +++ R+ ++ GY V F A AE+ L
Sbjct: 571258 ASLYVGDLHPDVTEAMLYQKCSPAG-PILFIQVCRDMISRRSLGYAHVNFQRPADAERAL 571082
Query: 63 HKINGKPLPGATPAKR 78
+N + G R
Sbjct: 571081 ATMNFDVIKGKASTHR 571034
Score = 30.4 bits (67), Expect(2) = 0.002
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -2
Query: 97 SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKF 144
++F+ +L +D+ Y F + + KVV D+ G SKGYGFV F
Sbjct: 570990 NIFIKNLGKSIDNKAQYGTF-SAFGNILSCKVVCDENG-SKGYGFVHF 570853
>gi|472269048|gb|KB715609.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00903, whole genome
shotgun sequence
Length = 908827
Score = 45.1 bits (105), Expect = 0.005
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3
Query: 255 KEFMEQSEELYDALMDCHWQPLDTVSSEIP 284
KEFM +S ELY+ LM+CHWQ LDT+ +IP
Sbjct: 377015 KEFMVKSVELYNFLMNCHWQALDTLHPKIP 376926
>gi|472269921|gb|KB714768.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00062, whole genome
shotgun sequence
Length = 3437453
Score = 44.3 bits (103), Expect = 0.008
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +3
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCL 62
ASL++GDL P + E + F+ G ++S+++ R+ +T GY +V F A AE+ L
Sbjct: 2673135 ASLYVGDLHPDVTEAMLYEKFSPAG-PILSIRVCRDMITCRSLGYAYVNFQQPADAERAL 2673311
Query: 63 HKIN-----GKPL 70
+N GKP+
Sbjct: 2673312 DTMNFDVIKGKPV 2673350
Score = 43.5 bits (101), Expect = 0.014
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 17/119 (14%)
Frame = +3
Query: 69 PLPGATPAKRFKLNYATYGK------------QPDNSPEY---SLFVGDLTPDVDDGMLY 113
P PG+ P + L+ +++GK ++P Y SL+VGDL PDV + MLY
Sbjct: 2673012 PPPGSGPRPQHSLS-SSHGKVAACGPAGSRAEMNPSAPSYPMASLYVGDLHPDVTEAMLY 2673188
Query: 114 EFFVKVYP--SCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRL 170
E F P S R + ++ T S GY +V F + +RAL V + KPVR+
Sbjct: 2673189 EKFSPAGPILSIRVCRDMI--TCRSLGYAYVNFQQPADAERALDTMNFDV-IKGKPVRI 2673356
Score = 35.0 bits (79), Expect = 5.2
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 129 VLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179
V+ + G SKG+GFV F+ E +A+TE G + + +KP+ +++A K R
Sbjct: 2692920 VMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRI-VATKPLYVALAQRKEER 2693069
>gi|471701503|gb|APMU01161251.1| Leptonychotes weddellii
contig161251, whole genome shotgun sequence
Length = 1635
Score = 42.0 bits (97), Expect = 0.042
Identities = 28/83 (33%), Positives = 49/83 (59%)
Frame = +2
Query: 97 SLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 156
+L+V +L +DD L + F + + G KV+++ G SKG+GFV F+ E +A+TE
Sbjct: 140 NLYVKNLDNGIDDERLRKEF-SPFGTITGAKVMMEG-GRSKGFGFVCFSSPEEATKAVTE 313
Query: 157 CQGAVGLGSKPVRLSVAIPKASR 179
G + + +KP+ +++A K R
Sbjct: 314 MNGRI-VATKPLYVALAQRKEER 379
>gi|472269735|gb|KB714954.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00248, whole genome
shotgun sequence
Length = 1766326
Score = 42.0 bits (97), Expect = 0.042
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Frame = +3
Query: 46 GYCFVEFADLATAEKCL----HKINGKPLPGATPAKRFKLNYATYGKQPDNSPEYSLFVG 101
G+ FV F D A+ +K L HK++GK L AK K GK+ +FVG
Sbjct: 761640 GFGFVLFKDAASVDKVLELKEHKLDGK-LIDPKRAKTLK------GKELPKK----VFVG 761786
Query: 102 DLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTECQGA 160
L+PD + + E+F + ++ +D +T +G+ F+ +T+E K+ L
Sbjct: 761787 GLSPDTSEEQIKEYF-GAFGEIENIELPMDTKTNERRGFCFITYTEEEPVKKLLESRYHQ 761963
Query: 161 VGLGSKPVRLS 171
+G G ++++
Sbjct: 761964 IGSGKYEIKVA 761996
>gi|472267841|gb|KB716816.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold02110, whole genome
shotgun sequence
Length = 436990
Score = 40.8 bits (94), Expect = 0.094
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = -2
Query: 129 VLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASRVK 181
V+ + G SKG+GFV F+ E RA+TE G + +GSKP+ +++A P+ R K
Sbjct: 247212 VMLEDGRSKGFGFVCFSSPEEATRAVTEMNGRI-VGSKPLHVTLA-PEEGRAK 247060
>gi|472269317|gb|KB715340.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00634, whole genome
shotgun sequence
Length = 1099537
Score = 38.1 bits (87), Expect = 0.61
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 129 VLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR 179
V+ + G SKG+GFV F+ E +A+TE G + +G+KP+ +++A K R
Sbjct: 306424 VMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRI-VGTKPLYVALAQRKEER 306573
Score = 35.8 bits (81), Expect = 3.0
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +3
Query: 3 ASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAE 59
ASL++GDL P + E + F+ G ++S+++ R+ T GY +V F A E
Sbjct: 292839 ASLYVGDLHPDVTEAMLYEKFSPAG-PILSIRVCRDVATRRSLGYAYVNFQQPADGE 293006
Score = 35.4 bits (80), Expect = 3.9
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 94 PEYSLFVGDLTPDVDDGMLYEFFVKVYP--SCRGGKVVLDQTGVSKGYGFVKF 144
P SL+VGDL PDV + MLYE F P S R + V T S GY +V F
Sbjct: 292833 PLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDV--ATRRSLGYAYVNF 292985
>gi|472269649|gb|KB715040.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00334, whole genome
shotgun sequence
Length = 1760956
Score = 38.1 bits (87), Expect = 0.61
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 96 YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRAL 154
+ +FV +L+PD D+ +L++ F + + KV+ D T KG+GFV T+ E A+
Sbjct: 1372482 WCIFVYNLSPDSDESVLWQLFGP-FGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 1372658
Query: 155 TECQGAVGLGSKPVRLSVAIPKASR 179
G LG + +++S KA +
Sbjct: 1372659 ASLNG-YRLGDRVLQVSFKTNKAHK 1372730
>gi|472269098|gb|KB715559.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00853, whole genome
shotgun sequence
Length = 1154564
Score = 37.0 bits (84), Expect = 1.4
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 1 MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEK 60
+ A++ +G+L+P +DE + +G +I+R+ TG Y F+ FA +E
Sbjct: 170027 VGANIVIGNLDPEIDEKLLCDISNALGVISQIPEIMRDPDTGNSKDYAFINFASFDASEA 170206
Query: 61 CLHKINGKPL 70
+ +NG+ L
Sbjct: 170207 AVEAMNGQYL 170236
>gi|472269492|gb|KB715197.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00491, whole genome
shotgun sequence
Length = 1259510
Score = 36.6 bits (83), Expect = 1.8
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = -1
Query: 93 SPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQK 151
S + +F+ +L D D+G+L++ F + + KV+ D T KG+GFV T+ E
Sbjct: 254891 SSGWCIFIYNLGQDADEGILWQMFGP-FGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAA 254715
Query: 152 RALTECQGAVGLGSKPVRLSVAIPKASR 179
A+ G LG K +++S K+ +
Sbjct: 254714 MAIASLNG-YRLGDKILQVSFKTNKSHK 254634
>gi|472269926|gb|KB714763.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00057, whole genome
shotgun sequence
Length = 3414115
Score = 36.6 bits (83), Expect = 1.8
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 96 YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRAL 154
+ +FV +L PD D+ +L++ F + + KV+ D T KG+GFV T+ E A+
Sbjct: 2692236 WCIFVYNLAPDADESILWQMFGP-FGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAI 2692412
Query: 155 TECQGAVGLGSKPVRLSVAIPKASR 179
G LG + +++S K +
Sbjct: 2692413 ASLNG-YRLGDRVLQVSFKTNKTHK 2692484
>gi|472269689|gb|KB715000.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00294, whole genome
shotgun sequence
Length = 1542201
Score = 35.4 bits (80), Expect = 3.9
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -1
Query: 98 LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRALTE 156
LFVG + D ++ L ++F + Y +++ D Q+G +G+GFV F D + + +
Sbjct: 628995 LFVGGIKEDTEEHHLRDYFEE-YGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVCK 628819
Query: 157 CQGAVGL 163
C AVG+
Sbjct: 628818 CL*AVGV 628798
>gi|472269924|gb|KB714765.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00059, whole genome
shotgun sequence
Length = 3449337
Score = 35.4 bits (80), Expect = 3.9
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -2
Query: 255 KEFMEQSEELYDALMDCHWQPLDTVSSEIP 284
KE M +EEL + M+CHW LDT S+IP
Sbjct: 2500421 KELMVNTEELNKSPMNCHWLILDTSHSKIP 2500332
>gi|472268157|gb|KB716500.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01794, whole genome
shotgun sequence
Length = 508381
Score = 35.0 bits (79), Expect = 5.2
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 96 YSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLD-QTGVSKGYGFVKFTDELEQKRAL 154
+ +FV +L+P+ D+ +L++ F + + KV+ D T KG+GFV T+ E A+
Sbjct: 119184 WCIFVYNLSPEADESVLWQLFGP-FGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAI 119360
Query: 155 TECQGAVGLGSKPVRLSVAIPK 176
G LG + +++S K
Sbjct: 119361 ASLNG-YRLGERVLQVSFKTSK 119423
>gi|472269974|gb|KB714715.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold00009, whole genome
shotgun sequence
Length = 6678008
Score = 35.0 bits (79), Expect = 5.2
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +1
Query: 2 AASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKC 61
+ASL + +L Y+ + AF+ G+ +V I+ +R G P+G VEF+ A K
Sbjct: 3941290 SASLTVRNLPQYVSNEQLEEAFSVFGQVDRAVVIVDDR--GKPSGKGIVEFSGEPAARKA 3941463
Query: 62 LHKINGKPLP 71
L + + LP
Sbjct: 3941464 LDRCKWRFLP 3941493
>gi|472268427|gb|KB716230.1| Leptonychotes weddellii isolate WS11-02
unplaced genomic scaffold scaffold01524, whole genome
shotgun sequence
Length = 612185
Score = 34.3 bits (77), Expect = 8.8
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 69 PLPGATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKV 128
P P A P A +G Q D + +FVG L D L ++F + + V
Sbjct: 257607 PRPPAAPG-------AMHGSQKDTTFT-KIFVGGLPYHTTDASLRKYF-EGFGDIEEAVV 257759
Query: 129 VLD-QTGVSKGYGFVKFTDELEQKRALTECQGAVG--LGSKPVRLSVAIPKASR 179
+ D QTG S+GYGFV R GA+ G++P + A P +R
Sbjct: 257760 ITDRQTGKSRGYGFVSGPAAGRTPRPALIAPGALSQPAGARPAAPAPAAPSWAR 257921
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge
nome.fa
Posted date: Oct 18, 2013 6:11 PM
Number of letters in database: 3,087,506,849
Number of sequences in database: 5788
Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge
nome.fa.01
Posted date: Oct 18, 2013 6:11 PM
Number of letters in database: 69,379,310
Number of sequences in database: 10,922
Lambda K H
0.317 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 844,664,009
Number of Sequences: 16710
Number of extensions: 10292421
Number of successful extensions: 33705
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 158
Number of HSP's that attempted gapping in prelim test: 32632
Number of HSP's gapped (non-prelim): 3033
length of query: 287
length of database: 1,052,295,386
effective HSP length: 131
effective length of query: 156
effective length of database: 1,050,106,376
effective search space: 163816594656
effective search space used: 163816594656
frameshift window, decay const: 40, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)