TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000038_2.0 # Protein # Glutathione peroxidase 6 (GPx6) #
Human (Homo sapiens)
         (221 letters)

Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/geno
me.fa 
           16,710 sequences; 3,156,886,159 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|472269128|gb|KB715529.1| Leptonychotes weddellii isolate WS11...   143   8e-33
gi|472266571|gb|KB718086.1| Leptonychotes weddellii isolate WS11...   119   2e-25
gi|472264638|gb|KB720019.1| Leptonychotes weddellii isolate WS11...   105   1e-21
gi|472268977|gb|KB715680.1| Leptonychotes weddellii isolate WS11...    91   5e-17
gi|472268639|gb|KB716018.1| Leptonychotes weddellii isolate WS11...    77   9e-13
gi|472269298|gb|KB715359.1| Leptonychotes weddellii isolate WS11...    48   4e-08
gi|472269799|gb|KB714890.1| Leptonychotes weddellii isolate WS11...    47   1e-07
gi|472269737|gb|KB714952.1| Leptonychotes weddellii isolate WS11...    55   2e-06
gi|472269781|gb|KB714908.1| Leptonychotes weddellii isolate WS11...    53   1e-05
gi|472269606|gb|KB715083.1| Leptonychotes weddellii isolate WS11...    48   5e-04
gi|472269840|gb|KB714849.1| Leptonychotes weddellii isolate WS11...    43   0.011
gi|472268710|gb|KB715947.1| Leptonychotes weddellii isolate WS11...    37   1.1  
gi|472268800|gb|KB715857.1| Leptonychotes weddellii isolate WS11...    36   1.8  
gi|472269505|gb|KB715184.1| Leptonychotes weddellii isolate WS11...    35   4.1  
gi|472269959|gb|KB714730.1| Leptonychotes weddellii isolate WS11...    34   5.3  

>gi|472269128|gb|KB715529.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold00823, whole genome
              shotgun sequence
          Length = 893735

 Score =  143 bits (360), Expect = 8e-33
 Identities = 72/103 (69%), Positives = 84/103 (81%), Gaps = 4/103 (3%)
 Frame = -1

Query: 122    VCPGSGF-VPSFQLFEK-GDVNGEKEQKVF--TFLKNSCPPTSDLLGSSSQLFWEPMKVH 177
              +C  +G+ V S ++ +K G     K+  +F  + L+NSCPPTSDLLGS+SQLFWEPMKVH
Sbjct: 486263 IC*DAGW*VDSSRVGDKTGSHRSRKKTLLFFLSLLQNSCPPTSDLLGSASQLFWEPMKVH 486084

Query: 178    DIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQFNT 220
              DIRWNFEKFLVGPDGVPVM WFH+APVSTVKSDILEYLKQF T
Sbjct: 486083 DIRWNFEKFLVGPDGVPVMRWFHKAPVSTVKSDILEYLKQFKT 485955



 Score =  113 bits (282), Expect = 9e-24
 Identities = 49/71 (69%), Positives = 59/71 (83%)
 Frame = +1

Query: 150    TFLKNSCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKS 209
              + L+ SCP  S++LG    + W+P+KVHDIRWNFEKFLVGPDGVPVM WFH+ P+STVKS
Sbjct: 524863 SLLQLSCPHPSEVLGLFRHISWDPVKVHDIRWNFEKFLVGPDGVPVMRWFHRTPISTVKS 525042

Query: 210    DILEYLKQFNT 220
              DILEYLKQF +
Sbjct: 525043 DILEYLKQFKS 525075



 Score = 92.4 bits (228), Expect = 2e-17
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -2

Query: 29     KVDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLAAQYP 80
              ++DC KGVTGTIYEYGALTLN EEYIQFK++AGKHVLFVNVA Y GL AQYP
Sbjct: 492262 QMDCYKGVTGTIYEYGALTLNEEEYIQFKRYAGKHVLFVNVATY*GLTAQYP 492107



 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 38/56 (67%), Positives = 46/56 (82%)
 Frame = +2

Query: 29     KVDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLAAQYPELNA 84
              ++DC K V GTIY+Y ALTLNG+E+IQFK++AGK VLFVNVA Y GL AQYP  N+
Sbjct: 520220 QMDCYKDVKGTIYDYEALTLNGKEHIQFKRYAGKPVLFVNVATYCGLTAQYPGKNS 520387



 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 35/46 (76%), Positives = 38/46 (82%)
 Frame = -2

Query: 81     ELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLKYVCPGS 126
              ELNALQ+ELK  GV+VL FPCNQFGKQEPG NSEIL GLK V  G+
Sbjct: 487804 ELNALQDELKPSGVVVLGFPCNQFGKQEPGKNSEILSGLK*VPAGT 487667



 Score = 70.1 bits (170), Expect = 9e-11
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = +3

Query: 81     ELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK 120
              ELNALQEELK  G++VL FPCNQFGKQEPG NSEIL GLK
Sbjct: 523173 ELNALQEELKPLGLVVLGFPCNQFGKQEPGENSEILPGLK 523292



 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = -2

Query: 116    LLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPP 158
              L+  +YV PG GFVP+FQLFEKGDVNGEKEQKVFTFLK S  P
Sbjct: 487225 LVHCRYVRPGGGFVPNFQLFEKGDVNGEKEQKVFTFLKVSDHP 487097



 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +1

Query: 120    KYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNS 155
              +YV PG G+VP+FQLFEKGDVNGEKEQKVFTFLK S
Sbjct: 523705 RYVRPGRGYVPNFQLFEKGDVNGEKEQKVFTFLKVS 523812


>gi|472266571|gb|KB718086.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold03380, whole genome
              shotgun sequence
          Length = 238997

 Score =  119 bits (297), Expect = 2e-25
 Identities = 50/70 (71%), Positives = 62/70 (88%)
 Frame = -3

Query: 148    VFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTV 207
              +F+ L+NSCPPTS+LLGS  +LFWEPMKVHDIRWNFEKFLVGPDGVP+M W+H+  V+TV
Sbjct: 238545 LFSPLQNSCPPTSELLGSPGRLFWEPMKVHDIRWNFEKFLVGPDGVPIMRWYHRTTVNTV 238366

Query: 208    KSDILEYLKQ 217
              K DIL Y+++
Sbjct: 238365 KMDILAYMRR 238336


>gi|472264638|gb|KB720019.1| Leptonychotes weddellii isolate WS11-02
             unplaced genomic scaffold scaffold05313, whole genome
             shotgun sequence
          Length = 66686

 Score =  105 bits (263), Expect = 1e-21
 Identities = 57/121 (47%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
 Frame = -1

Query: 101   CNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTS 160
             C+ F  QE   N EIL  LKYV PG GF P+F LFEK +VNG +   +F FL+ S P  S
Sbjct: 61628 CSPF-PQENAKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGAQAHPLFAFLRESLPAPS 61452

Query: 161   D----LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLK 216
             D    L+     + W P+  +DI WNFEKFLVGPDGVPV  +  + P   ++ DI   L 
Sbjct: 61451 DDATALMTDPKFITWSPVCRNDIAWNFEKFLVGPDGVPVRRYSRRFPTINIEPDIEALLS 61272

Query: 217   Q 217
             Q
Sbjct: 61271 Q 61269



 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
 Frame = -1

Query: 39    TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLAAQ-YPELNALQEELKNFGVIVL 97
             ++Y + A  L G E +      GK +L  NVA+  G   + Y ++N LQ  L   G++VL
Sbjct: 62039 SVYAFSARPLAGGEPLSLGSLRGKVLLIENVASL*GTTVRDYTQMNELQRRLGPRGLVVL 61860

Query: 98    AFPCNQFGKQ 107
              FPCNQFG Q
Sbjct: 61859 GFPCNQFGHQ 61830


>gi|472268977|gb|KB715680.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold00974, whole genome
              shotgun sequence
          Length = 858563

 Score = 90.9 bits (224), Expect = 5e-17
 Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
 Frame = +2

Query: 112    NSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSD----LLGSSS 167
              N EIL  LKYV PG GF P+F L +K +VNG+ E  VF +LK+  P   D    L+    
Sbjct: 334520 NEEILNSLKYVRPGGGFQPTFTLVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPK 334699

Query: 168    QLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLK 216
               + W P++  D+ WNFEKFL+GP+G P   +        ++ DI   LK
Sbjct: 334700 FIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFQTINIEPDIKRLLK 334846



 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +1

Query: 36     VTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLAAQ-YPELNALQEELKNFGV 94
              +  + Y+  A +L+GE+ + F  F G+ VL  NVA+  G  ++ + +LN LQ       +
Sbjct: 331957 IAKSFYDLSATSLDGEK-VDFNTFRGRAVLIENVASL*GTTSRDFTQLNELQCRFPR-RL 332130

Query: 95     IVLAFPCNQFGKQEPG 110
              +VL FPCNQFG Q  G
Sbjct: 332131 VVLGFPCNQFGHQVRG 332178


>gi|472268639|gb|KB716018.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold01312, whole genome
              shotgun sequence
          Length = 700520

 Score = 76.6 bits (187), Expect = 9e-13
 Identities = 32/51 (62%), Positives = 44/51 (86%)
 Frame = +2

Query: 29     KVDCNKGVTGTIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYXGLAAQY 79
              + DC+  V+GTIYEYGALT++G+EY+ FK++AGK++LFVNVA+Y GL  QY
Sbjct: 632492 QTDCHADVSGTIYEYGALTIDGQEYVPFKRYAGKYILFVNVASY*GLTGQY 632644



 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +1

Query: 80     PELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILLGLK 120
              PELNALQEEL+ FG+++L FPCNQFGKQEPG NSEIL  LK
Sbjct: 633841 PELNALQEELEPFGLVILGFPCNQFGKQEPGENSEILPSLK 633963



 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +3

Query: 120    KYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPP 158
              +YV PG GFVP+FQLFEKGDVNGEKEQK +TFLK S  P
Sbjct: 634428 RYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKVSAQP 634544


>gi|472269298|gb|KB715359.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold00653, whole genome
              shotgun sequence
          Length = 1047930

 Score = 48.1 bits (113), Expect(2) = 4e-08
 Identities = 25/55 (45%), Positives = 34/55 (61%)
 Frame = -1

Query: 98     AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFL 152
              +F C+QF   E   N +IL  LK++ P  GF P+  LFEK +V G + Q +FTFL
Sbjct: 661812 SFLCHQFRH*ENDRNKDILNSLKHI*PSVGFEPTSVLFEKCEVKGAQVQLLFTFL 661648



 Score = 32.7 bits (73), Expect(2) = 4e-08
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 171    WEPMKVHDIRWNFEKFLVGPDGVPV 195
              W P+  +D+ WN    +VGPDGVPV
Sbjct: 661588 WSPVCCNDVTWNI---MVGPDGVPV 661523


>gi|472269799|gb|KB714890.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold00184, whole genome
              shotgun sequence
          Length = 2053070

 Score = 47.4 bits (111), Expect(2) = 1e-07
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +3

Query: 136    EKGDVNGEKEQKVFTFLKNSCPPTSD----LLGSSSQLFWEPMKVHDIRWNFEKFLVGPD 191
              E+ +VN  +    FT L+ +    S+    L+ +     W  M  H++ WNFEK LVGPD
Sbjct: 438978 EECEVNSTQVHPPFTLLQEALSAPSENATVLMTNPKFNTWSRMCCHNVAWNFEKVLVGPD 439157

Query: 192    GVPV 195
              GVPV
Sbjct: 439158 GVPV 439169



 Score = 31.6 bits (70), Expect(2) = 1e-07
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +1

Query: 93     GVIVLAFPCNQFGKQEPGTNSEILLGLKYVCP 124
              G++ L FP  QF  QE     EIL  LKY+ P
Sbjct: 438844 GLVKLGFPGKQFRHQENAKKKEILNSLKYIPP 438939


>gi|472269737|gb|KB714952.1| Leptonychotes weddellii isolate WS11-02
               unplaced genomic scaffold scaffold00246, whole genome
               shotgun sequence
          Length = 1829979

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 39/95 (41%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = +2

Query: 59      FAGKHVLFVNVAAYXGLAAQ-YPELNALQEELKNFGVIVLAFPCNQFGKQEPGTNSEILL 117
               FA +  L VNVA+  G   Q Y  L  LQ +L      VLAFPCNQFG+QEP TN EI  
Sbjct: 1334960 FATQVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDTNKEIES 1335139

Query: 118     GLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFL 152
                 +       +  SF +F K  V G      F +L
Sbjct: 1335140 FARRT-----YGVSFPMFSKVAVTGTGAHPAFKYL 1335229


>gi|472269781|gb|KB714908.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold00202, whole genome
              shotgun sequence
          Length = 2068787

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
 Frame = -1

Query: 50     GEEYIQFKQFAGKHVLFVNVAAYXGLAA-QYPELNALQEELKNFGVIVLAFPCNQFGKQE 108
              G E +      GK +LF NVA+  G     Y ++N LQ  L+  G++VL F  + F  QE
Sbjct: 965987 GGEPMSLGCLRGKVLLFQNVASL*GPKVWDYTQMNQLQRRLRPQGLVVLGFRRHHFRHQE 965808

Query: 109    PGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVF 149
                 + EIL  L++V       P+    EKG+VNG +   +F
Sbjct: 965807 NAKSEEILNSLEHVPARGWLQPNLSPSEKGEVNGVQAHPLF 965685


>gi|472269606|gb|KB715083.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold00377, whole genome
              shotgun sequence
          Length = 1354867

 Score = 47.8 bits (112), Expect = 5e-04
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
 Frame = +3

Query: 54     IQFKQFAGKHVLFVNVAAYXGLAAQ-YPELNALQEELKNFGVIVLAFPCNQFGKQEPGTN 112
              + F  F  +  L VNVA+   L  + Y  L  L +E   F   VLAFPCNQFG+ EP  +
Sbjct: 621894 LDFFFFFREVALVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPS 622073

Query: 113    SEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFL 152
               E++   +     + +  +F +F K  + G +    F FL
Sbjct: 622074 KEVVSFAR-----NNYGVTFPIFHKIKILGSEADPAFRFL 622178



 Score = 38.1 bits (87), Expect = 0.37
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 180    RWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILEYLKQ 217
              RWNF K+LV P+G  V  W  + P+  ++ +I   ++Q
Sbjct: 625390 RWNFWKYLVNPEGQVVKSWRPEEPIEVIRPEIAALIRQ 625503


>gi|472269840|gb|KB714849.1| Leptonychotes weddellii isolate WS11-02
               unplaced genomic scaffold scaffold00143, whole genome
               shotgun sequence
          Length = 2374980

 Score = 43.1 bits (100), Expect = 0.011
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
 Frame = +1

Query: 105     GKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPPTSD--- 161
               G+++ G + E L   + + P  GF P F+LFE   V+  + +     L+ + P   +   
Sbjct: 1714837 GERQEGGDPETL---RTIGPRGGFEPDFRLFENHLVSSAQVRPPLLRLQEALPAPREHAT 1715007

Query: 162     LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQ 201
                L +  +L W  +    + WN  KFL GPDG     W  Q
Sbjct: 1715008 ALLAHPKLTWSQVWGEGVGWNLGKFLKGPDGPTPGAWQSQ 1715127


>gi|472268710|gb|KB715947.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold01241, whole genome
              shotgun sequence
          Length = 781753

 Score = 36.6 bits (83), Expect = 1.1
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +2

Query: 59     FAGKHVLFVNVAAYXGLA-AQYPELNALQEELKNFGVIVLAFPCNQFGKQEPG 110
              F G   +  NVA+  G     Y +L  L       G+ +LAFPCNQFG+Q  G
Sbjct: 571937 FRGFVCIVTNVASQ*GKTEVNYTQLVDLHARFAECGLRILAFPCNQFGRQVRG 572095


>gi|472268800|gb|KB715857.1| Leptonychotes weddellii isolate WS11-02
              unplaced genomic scaffold scaffold01151, whole genome
              shotgun sequence
          Length = 762929

 Score = 35.8 bits (81), Expect = 1.8
 Identities = 27/99 (27%), Positives = 40/99 (40%)
 Frame = +2

Query: 95     IVLAFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKN 154
              I+L FPC  F +QE   N EIL  L+YV    G  P+ + +           +     ++
Sbjct: 665126 IMLGFPCYHFRRQENAKNQEILNSLRYVRSRVGSSPTSRSWRGARTAPRLPGETLPGPRD 665305

Query: 155    SCPPTSDLLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGV 193
                      L  +    W  +    +  N EKFLV  +GV
Sbjct: 665306 HATALGPRLTFTP---WSRVCCSPVAGNLEKFLVDKNGV 665413


>gi|472269505|gb|KB715184.1| Leptonychotes weddellii isolate WS11-02
               unplaced genomic scaffold scaffold00478, whole genome
               shotgun sequence
          Length = 1301539

 Score = 34.7 bits (78), Expect = 4.1
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 145     EQKVFTFLKNSCPPTSDLLGSSSQLFWEPMKVHDIRWNF 183
               EQ  F FL+NSCP    + G     FW    +++I WNF
Sbjct: 1130144 EQPDF*FLRNSCPGHWGMKGQL*GSFWNKKNLNEIGWNF 1130260


>gi|472269959|gb|KB714730.1| Leptonychotes weddellii isolate WS11-02
               unplaced genomic scaffold scaffold00024, whole genome
               shotgun sequence
          Length = 4500125

 Score = 34.3 bits (77), Expect = 5.3
 Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
 Frame = +2

Query: 107     QEPG--TNSE-ILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCPP--TSD 161
               Q PG  TN    LL  K + P S FV    L +K      +E+    FLK+SCP   +  
Sbjct: 4336118 QNPGIMTNDRYFLLQRKILSP*SIFVFHLFLIQK------REEHFCIFLKHSCPRFFSGH 4336279

Query: 162     LLGSSSQLFWEPMKVHDIRWNFEKF 186
               +L +  Q F    KVHD R +F KF
Sbjct: 4336280 ILSAGGQSF--S*KVHDFRKSFSKF 4336348


  Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge
  nome.fa
    Posted date:  Oct 18, 2013  6:11 PM
  Number of letters in database: 3,087,506,849
  Number of sequences in database:  5788
  
  Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge
  nome.fa.01
    Posted date:  Oct 18, 2013  6:11 PM
  Number of letters in database: 69,379,310
  Number of sequences in database:  10,922
  
Lambda     K      H
   0.322    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 869,713,421
Number of Sequences: 16710
Number of extensions: 13217089
Number of successful extensions: 48192
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 329
Number of HSP's that attempted gapping in prelim test: 45100
Number of HSP's gapped (non-prelim): 8670
length of query: 221
length of database: 1,052,295,386
effective HSP length: 127
effective length of query: 94
effective length of database: 1,050,173,216
effective search space: 98716282304
effective search space used: 98716282304
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)