Command line: [exonerate -m p2g --showtargetgff -q ./Gpx3.fa -t Gpx3.carpeta/genomic.fa] Hostname: [ws101094] C4 Alignment: ------------ Query: SPP00000021_2.0 # Protein # Glutathione peroxidase 3 (GPx3) # Human (Homo sapiens) Target: gi|472266571|gb|KB718086.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold03380, whole genome shotgun sequence:[revcomp] Model: protein2genome:local Raw score: 354 Query range: 147 -> 224 Target range: 238545 -> 238314 148 : PheTyrThrPheLeuLysAsnSerCysProProThrSerGluLeuLeuGlyThrSerA : 167 .!!!:!:!! |||:!!|||||||||||||||||||||||||||||||||:!! !!! LeuPheSerProLeuGlnAsnSerCysProProThrSerGluLeuLeuGlySerProG 238545 : CTCTTCTCCCCGCTGCAGAACTCCTGCCCTCCCACCTCGGAGCTCCTGGGCTCACCGG : 238488 168 : spArgLeuPheTrpGluProMetLysValHisAspIleArgTrpAsnPheGluLysPh : 186 !|||||||||||||||||||||||||||||||||||||||||||||||||||||||| lyArgLeuPheTrpGluProMetLysValHisAspIleArgTrpAsnPheGluLysPh 238487 : GCCGCCTCTTCTGGGAGCCTATGAAGGTCCATGACATCCGCTGGAACTTTGAGAAGTT : 238431 187 : eLeuValGlyProAspGlyIleProIleMetArgTrpHisHisArgThrThrValSer : 205 |||||||||||||||||||:!!|||||||||||||||:!!|||||||||||||||!:! eLeuValGlyProAspGlyValProIleMetArgTrpTyrHisArgThrThrValAsn 238430 : CCTGGTGGGGCCGGACGGTGTACCCATCATGCGCTGGTACCACCGGACCACGGTCAAC : 238374 206 : AsnValLysMetAspIleLeuSerTyrMetArgArgGlnAlaAlaLeuGlyValLys : 224 !.!||||||||||||||||||:!!||||||||||||||||||||||||!.!|||||| ThrValLysMetAspIleLeuAlaTyrMetArgArgGlnAlaAlaLeuAlaValLys 238373 : ACCGTCAAGATGGACATCCTGGCTTACATGCGGCGGCAGGCGGCTCTGGCGGTCAAG : 238315 vulgar: SPP00000021_2.0 147 224 . gi|472266571|gb|KB718086.1| 238545 238314 - 354 M 77 231 # --- START OF GFF DUMP --- # # ##gff-version 2 ##source-version exonerate:protein2genome:local 2.2.0 ##date 2013-11-15 ##type DNA # # # seqname source feature start end score strand frame attributes # gi|472266571|gb|KB718086.1| exonerate:protein2genome:local gene 238315 238545 354 - . gene_id 1 ; sequence SPP00000021_2.0 ; gene_orientation . gi|472266571|gb|KB718086.1| exonerate:protein2genome:local cds 238315 238545 . - . gi|472266571|gb|KB718086.1| exonerate:protein2genome:local exon 238315 238545 . - . insertions 0 ; deletions 0 gi|472266571|gb|KB718086.1| exonerate:protein2genome:local similarity 238315 238545 354 - . alignment_id 1 ; Query SPP00000021_2.0 ; Align 238546 148 231 # --- END OF GFF DUMP --- # -- completed exonerate analysis