Command line: [exonerate -m p2g --showtargetgff -q ./Gpx2.fa -t Gpx2.carpeta/genomic.fa]
Hostname: [ws101094]

C4 Alignment:
------------
         Query: SPP00000019_2.0 # Protein # Glutathione peroxidase 2 (GPx2) # Human (Homo sapiens)
        Target: gi|472268977|gb|KB715680.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00974, whole genome shotgun sequence
         Model: protein2genome:local
     Raw score: 980
   Query range: 0 -> 190
  Target range: 331947 -> 334855

      1 : MetAlaPheIleAlaLysSerPheTyrAspLeuSerAlaIleSerLeuAspGlyGluL :     20
          ||||||!:!||||||||||||||||||||||||||||||! !||||||||||||||||
          MetAlaTyrIleAlaLysSerPheTyrAspLeuSerAlaThrSerLeuAspGlyGluL
 331948 : ATGGCTTACATAGCCAAGTCCTTCTACGACCTCAGTGCCACCAGCCTGGACGGGGAGA : 332005

     21 : ysValAspPheAsnThrPheArgGlyArgAlaValLeuIleGluAsnValAlaSerLe :     39
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          ysValAspPheAsnThrPheArgGlyArgAlaValLeuIleGluAsnValAlaSerLe
 332006 : AGGTAGATTTCAACACATTCCGAGGCAGGGCCGTGCTGATTGAGAACGTGGCCTCGCT : 332062

     40 : uUnkGlyThrThrThrArgAspPheThrGlnLeuAsnGluLeuGlnCysArgPhePro :     58
          |   |||||||||!:!||||||||||||||||||||||||||||||||||||||||||
          u***GlyThrThrSerArgAspPheThrGlnLeuAsnGluLeuGlnCysArgPhePro
 332063 : CTGAGGCACGACCAGCCGGGACTTCACCCAGCTCAACGAGCTGCAATGCCGCTTTCCC : 332119

     59 : ArgArgLeuValValLeuGlyPheProCysAsnGlnPheGlyHisGln  >>>> Tar :     75
          ||||||||||||||||||||||||||||||||||||||||||||||||          
          ArgArgLeuValValLeuGlyPheProCysAsnGlnPheGlyHisGln++        
 332120 : AGGCGCCTGGTGGTTCTCGGCTTCCCTTGCAACCAATTTGGACATCAGgt........ : 332172

     76 : get Intron 1 >>>>  GluAsnCysGlnAsnGluGluIleLeuAsnSerLeuLys :     87
           2338 bp           |||||||||||||||||||||||||||||||||||||||
                           ++GluAsnCysGlnAsnGluGluIleLeuAsnSerLeuLys
 332173 : .................agGAGAACTGTCAGAATGAGGAGATCCTGAACAGTCTCAAG : 334544

     88 : TyrValArgProGlyGlyGlyTyrGlnProThrPheThrLeuValGlnLysCysGluV :    107
          |||||||||||||||||||||!:!||||||||||||||||||||||||||||||||||
          TyrValArgProGlyGlyGlyPheGlnProThrPheThrLeuValGlnLysCysGluV
 334545 : TATGTCCGCCCTGGGGGTGGATTCCAGCCCACCTTTACCCTTGTCCAAAAGTGTGAGG : 334604

    108 : alAsnGlyGlnAsnGluHisProValPheAlaTyrLeuLysAspLysLeuProTyrPr :    126
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          alAsnGlyGlnAsnGluHisProValPheAlaTyrLeuLysAspLysLeuProTyrPr
 334605 : TGAATGGTCAGAACGAGCATCCTGTCTTCGCCTACCTGAAGGACAAGCTCCCCTACCC : 334661

    127 : oTyrAspAspProPheSerLeuMetThrAspProLysLeuIleIleTrpSerProVal :    145
          |||||||||||||||||||||||||||||||||||||!!!||||||||||||||||||
          oTyrAspAspProPheSerLeuMetThrAspProLysPheIleIleTrpSerProVal
 334662 : TTACGATGACCCATTTTCCCTCATGACCGATCCCAAGTTCATCATTTGGAGCCCCGTG : 334718

    146 : ArgArgSerAspValAlaTrpAsnPheGluLysPheLeuIleGlyProGluGlyGluP :    165
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
          ArgArgSerAspValAlaTrpAsnPheGluLysPheLeuIleGlyProGluGlyGluP
 334719 : CGCCGCTCGGATGTGGCCTGGAACTTTGAGAAGTTCCTTATTGGGCCGGAGGGGGAGC : 334778

    166 : roPheArgArgTyrSerArgThrPheProThrIleAsnIleGluProAspIleLysAr :    184
          ||||||||||||||||||||||||||! !|||||||||||||||||||||||||||||
          roPheArgArgTyrSerArgThrPheGlnThrIleAsnIleGluProAspIleLysAr
 334779 : CCTTCCGCCGCTACAGCCGCACCTTCCAGACCATCAACATTGAGCCTGACATCAAACG : 334835

    185 : gLeuLeuLysValAlaIle :    190
          |||||||||||||||||||
          gLeuLeuLysValAlaIle
 334836 : CCTCCTCAAAGTTGCCATA : 334855

vulgar: SPP00000019_2.0 0 190 . gi|472268977|gb|KB715680.1| 331947 334855 + 980 M 74 222 5 0 2 I 0 2334 3 0 2 M 116 348
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2013-11-15
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	gene	331948	334855	980	+	.	gene_id 1 ; sequence SPP00000019_2.0 ; gene_orientation +
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	cds	331948	332169	.	+	.	
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	exon	331948	332169	.	+	.	insertions 0 ; deletions 0
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	splice5	332170	332171	.	+	.	intron_id 1 ; splice_site "GT"
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	intron	332170	334507	.	+	.	intron_id 1
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	splice3	334506	334507	.	+	.	intron_id 0 ; splice_site "AG"
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	cds	334508	334855	.	+	.	
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	exon	334508	334855	.	+	.	insertions 0 ; deletions 0
gi|472268977|gb|KB715680.1|	exonerate:protein2genome:local	similarity	331948	334855	980	+	.	alignment_id 1 ; Query SPP00000019_2.0 ; Align 331948 1 222 ; Align 334508 75 348
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis