Command line: [exonerate -m p2g --showtargetgff -q ./Gpx1.fa -t Gpx1.carpeta/genomic.fa]
Hostname: [ws101094]

C4 Alignment:
------------
         Query: SPP00000017_2.0 # Protein # Glutathione peroxidase 1 (GPx1) # Human (Homo sapiens)
        Target: gi|472264638|gb|KB720019.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold05313, whole genome shotgun sequence:[revcomp]
         Model: protein2genome:local
     Raw score: 962
   Query range: 1 -> 203
  Target range: 62078 -> 61253

     2 : CysAlaAlaArgLeuAlaAlaAlaAlaAlaAlaAlaGlnSerValTyrAlaPheSerAla :    21
         ..!||||||  !:!!|||! !|||||||||||| !!!::|||||||||||||||||||||
         AlaAlaAlaAlaValAlaAspAlaAlaAlaAlaProArgSerValTyrAlaPheSerAla
 62078 : GCCGCCGCCGCCGTCGCCGATGCGGCGGCGGCCCCGCGCTCCGTGTATGCCTTCTCTGCG : 62021

    22 : ArgProLeuAlaGlyGlyGluProValSerLeuGlySerLeuArgGlyLysValLeuLeu :    41
         ||||||||||||||||||||||||:!!|||||||||||||||||||||||||||||||||
         ArgProLeuAlaGlyGlyGluProLeuSerLeuGlySerLeuArgGlyLysValLeuLeu
 62020 : CGCCCGCTGGCCGGCGGGGAGCCCCTGAGCCTGGGTTCCCTGCGGGGCAAGGTGCTGCTC : 61961

    42 : IleGluAsnValAlaSerLeuUnkGlyThrThrValArgAspTyrThrGlnMetAsnGlu :    61
         |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||
         IleGluAsnValAlaSerLeu***GlyThrThrValArgAspTyrThrGlnMetAsnGlu
 61960 : ATTGAGAATGTGGCGTCGCTCTGAGGCACAACGGTCCGGGACTACACCCAGATGAACGAG : 61901

    62 : LeuGlnArgArgLeuGlyProArgGlyLeuValValLeuGlyPheProCysAsnGlnPhe :    81
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
         LeuGlnArgArgLeuGlyProArgGlyLeuValValLeuGlyPheProCysAsnGlnPhe
 61900 : CTGCAGCGGCGCCTCGGGCCCCGGGGCCTGGTTGTGCTCGGCTTCCCATGCAACCAGTTC : 61841

    82 : GlyHisGln  >>>> Target Intron 1 >>>>  GluAsnAlaLysAsnGluGluI :    92
         |||||||||            219 bp           ||||||||||||||||||||||
         GlyHisGln++                         ++GluAsnAlaLysAsnGluGluI
 61840 : GGGCATCAGgt.........................agGAGAACGCTAAGAACGAAGAGA : 61589

    93 : leLeuAsnSerLeuLysTyrValArgProGlyGlyGlyPheGluProAsnPheMetLeuP :   112
         |||||||||||||||||||||||||||||||||||||||||||||||||||||! !||||
         leLeuAsnSerLeuLysTyrValArgProGlyGlyGlyPheGluProAsnPheThrLeuP
 61588 : TCCTGAATTCCCTCAAGTACGTCCGACCTGGCGGCGGGTTCGAGCCCAACTTCACGCTTT : 61529

   113 : heGluLysCysGluValAsnGlyAlaGlyAlaHisProLeuPheAlaPheLeuArgGluA :   132
         ||||||||||||||||||||||||||  !||||||||||||||||||||||||||||||:
         heGluLysCysGluValAsnGlyAlaGlnAlaHisProLeuPheAlaPheLeuArgGluS
 61528 : TTGAGAAGTGCGAGGTGAACGGCGCGCAGGCGCACCCCCTCTTCGCCTTCCTGCGGGAGT : 61469

   133 : laLeuProAlaProSerAspAspAlaThrAlaLeuMetThrAspProLysLeuIleThrT :   152
         !!||||||||||||||||||||||||||||||||||||||||||||||||!!!|||||||
         erLeuProAlaProSerAspAspAlaThrAlaLeuMetThrAspProLysPheIleThrT
 61468 : CCCTGCCAGCCCCTAGTGACGACGCCACTGCGCTCATGACCGACCCCAAGTTCATCACCT : 61409

   153 : rpSerProValCysArgAsnAspValAlaTrpAsnPheGluLysPheLeuValGlyProA :   172
         |||||||||||||||||||||||:!!||||||||||||||||||||||||||||||||||
         rpSerProValCysArgAsnAspIleAlaTrpAsnPheGluLysPheLeuValGlyProA
 61408 : GGTCTCCCGTGTGCCGCAACGACATCGCCTGGAACTTTGAGAAGTTCCTGGTGGGCCCGG : 61349

   173 : spGlyValProLeuArgArgTyrSerArgArgPheGlnThrIleAspIleGluProAspI :   192
         |||||||||||:!!|||||||||||||||||||||!  ||||||:!!|||||||||||||
         spGlyValProValArgArgTyrSerArgArgPheProThrIleAsnIleGluProAspI
 61348 : ATGGTGTGCCTGTGCGCAGGTACAGCCGCCGCTTTCCCACCATCAATATCGAGCCTGACA : 61289

   193 : leGluAlaLeuLeuSerGlnGlyProSerCysAla :   203
         ||||||||||||||||||||||||||||| !!|||
         leGluAlaLeuLeuSerGlnGlyProSerSerAla
 61288 : TCGAAGCCCTGCTGTCCCAGGGGCCCAGCAGTGCC : 61254

vulgar: SPP00000017_2.0 1 203 . gi|472264638|gb|KB720019.1| 62078 61253 - 962 M 83 249 5 0 2 I 0 215 3 0 2 M 119 357
# --- START OF GFF DUMP ---
#
#
##gff-version 2
##source-version exonerate:protein2genome:local 2.2.0
##date 2013-11-15
##type DNA
#
#
# seqname source feature start end score strand frame attributes
#
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	gene	61254	62078	962	-	.	gene_id 1 ; sequence SPP00000017_2.0 ; gene_orientation +
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	cds	61830	62078	.	-	.	
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	exon	61830	62078	.	-	.	insertions 0 ; deletions 0
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	splice5	61828	61829	.	-	.	intron_id 1 ; splice_site "GT"
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	intron	61611	61829	.	-	.	intron_id 1
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	splice3	61611	61612	.	-	.	intron_id 0 ; splice_site "AG"
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	cds	61254	61610	.	-	.	
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	exon	61254	61610	.	-	.	insertions 0 ; deletions 0
gi|472264638|gb|KB720019.1|	exonerate:protein2genome:local	similarity	61254	62078	962	-	.	alignment_id 1 ; Query SPP00000017_2.0 ; Align 62079 2 249 ; Align 61611 85 357
# --- END OF GFF DUMP ---
#
-- completed exonerate analysis