TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000017_2.0 # Protein # Glutathione peroxidase 1 (GPx1) # Human (Homo sapiens) (203 letters) Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/geno me.fa 16,710 sequences; 3,156,886,159 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|472264638|gb|KB720019.1| Leptonychotes weddellii isolate WS11... 236 6e-61 gi|472268977|gb|KB715680.1| Leptonychotes weddellii isolate WS11... 179 1e-43 gi|472269799|gb|KB714890.1| Leptonychotes weddellii isolate WS11... 109 5e-36 gi|472269781|gb|KB714908.1| Leptonychotes weddellii isolate WS11... 152 1e-35 gi|472269840|gb|KB714849.1| Leptonychotes weddellii isolate WS11... 108 2e-22 gi|472269298|gb|KB715359.1| Leptonychotes weddellii isolate WS11... 84 6e-15 gi|472267375|gb|KB717282.1| Leptonychotes weddellii isolate WS11... 82 2e-14 gi|472268800|gb|KB715857.1| Leptonychotes weddellii isolate WS11... 80 5e-14 gi|472269737|gb|KB714952.1| Leptonychotes weddellii isolate WS11... 74 4e-12 gi|472269981|gb|KB714708.1| Leptonychotes weddellii isolate WS11... 47 1e-09 gi|472269606|gb|KB715083.1| Leptonychotes weddellii isolate WS11... 60 6e-08 gi|472269128|gb|KB715529.1| Leptonychotes weddellii isolate WS11... 59 2e-07 gi|472266571|gb|KB718086.1| Leptonychotes weddellii isolate WS11... 58 3e-07 gi|472268639|gb|KB716018.1| Leptonychotes weddellii isolate WS11... 56 1e-06 gi|472268710|gb|KB715947.1| Leptonychotes weddellii isolate WS11... 52 2e-05 gi|472269918|gb|KB714771.1| Leptonychotes weddellii isolate WS11... 42 0.021 gi|472269789|gb|KB714900.1| Leptonychotes weddellii isolate WS11... 35 2.0 gi|472269731|gb|KB714958.1| Leptonychotes weddellii isolate WS11... 35 3.4 gi|471700889|gb|APMU01161865.1| Leptonychotes weddellii contig16... 34 5.7 gi|472266612|gb|KB718045.1| Leptonychotes weddellii isolate WS11... 33 7.5 >gi|472264638|gb|KB720019.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold05313, whole genome shotgun sequence Length = 66686 Score = 236 bits (602), Expect = 6e-61 Identities = 115/133 (86%), Positives = 120/133 (90%) Frame = -1 Query: 71 LVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLR 130 L G C+ F QENAKNEEILNSLKYVRPGGGFEPNF LFEKCEVNGA AHPLFAFLR Sbjct: 61649 LAAPGSSCSPFP-QENAKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGAQAHPLFAFLR 61473 Query: 131 EALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEP 190 E+LPAPSDDATALMTDPK ITWSPVCRND+AWNFEKFLVGPDGVP+RRYSRRF TI+IEP Sbjct: 61472 ESLPAPSDDATALMTDPKFITWSPVCRNDIAWNFEKFLVGPDGVPVRRYSRRFPTINIEP 61293 Query: 191 DIEALLSQGPSCA 203 DIEALLSQGPS A Sbjct: 61292 DIEALLSQGPSSA 61254 Score = 139 bits (349), Expect = 1e-31 Identities = 69/74 (93%), Positives = 71/74 (95%) Frame = -1 Query: 14 QSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVV 73 +SVYAFSARPLAGGEP+SLGSLRGKVLLIENVASL GTTVRDYTQMNELQRRLGPRGLVV Sbjct: 62042 RSVYAFSARPLAGGEPLSLGSLRGKVLLIENVASL*GTTVRDYTQMNELQRRLGPRGLVV 61863 Query: 74 LGFPCNQFGHQENA 87 LGFPCNQFGHQ A Sbjct: 61862 LGFPCNQFGHQVRA 61821 >gi|472268977|gb|KB715680.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00974, whole genome shotgun sequence Length = 858563 Score = 179 bits (453), Expect = 1e-43 Identities = 90/146 (61%), Positives = 105/146 (71%), Gaps = 6/146 (4%) Frame = +2 Query: 57 TQMNELQRRLGPRGLVVLGFPCNQ------FGHQENAKNEEILNSLKYVRPGGGFEPNFM 110 TQ + R G R L +L FP F EN +NEEILNSLKYVRPGGGF+P F Sbjct: 334406 TQKRMILGREGERFLWILHFPLPSSMLFVFFLP*ENCQNEEILNSLKYVRPGGGFQPTFT 334585 Query: 111 LFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVG 170 L +KCEVNG HP+FA+L++ LP P DD +LMTDPK I WSPV R+DVAWNFEKFL+G Sbjct: 334586 LVQKCEVNGQNEHPVFAYLKDKLPYPYDDPFSLMTDPKFIIWSPVRRSDVAWNFEKFLIG 334765 Query: 171 PDGVPLRRYSRRFQTIDIEPDIEALL 196 P+G P RRYSR FQTI+IEPDI+ LL Sbjct: 334766 PEGEPFRRYSRTFQTINIEPDIKRLL 334843 Score = 84.0 bits (206), Expect = 5e-15 Identities = 46/71 (64%), Positives = 52/71 (73%) Frame = +1 Query: 14 QSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVV 73 +S Y SA L GE V + RG+ +LIENVASL GTT RD+TQ+NELQ R PR LVV Sbjct: 331963 KSFYDLSATSL-DGEKVDFNTFRGRAVLIENVASL*GTTSRDFTQLNELQCRF-PRRLVV 332136 Query: 74 LGFPCNQFGHQ 84 LGFPCNQFGHQ Sbjct: 332137 LGFPCNQFGHQ 332169 >gi|472269799|gb|KB714890.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00184, whole genome shotgun sequence Length = 2053070 Score = 109 bits (272), Expect(2) = 5e-36 Identities = 55/90 (61%), Positives = 65/90 (72%) Frame = +3 Query: 108 NFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKF 167 N E+CEVN HP F L+EAL APS++AT LMT+PK TWS +C ++VAWNFEK Sbjct: 438963 NLHTSEECEVNSTQVHPPFTLLQEALSAPSENATVLMTNPKFNTWSRMCCHNVAWNFEKV 439142 Query: 168 LVGPDGVPLRRYSRRFQTIDIEPDIEALLS 197 LVGPDGVP+ R S F IDIEPD +ALLS Sbjct: 439143 LVGPDGVPVSRLS-CFPAIDIEPDTKALLS 439229 Score = 65.5 bits (158), Expect(2) = 5e-36 Identities = 39/70 (55%), Positives = 42/70 (60%) Frame = +1 Query: 32 LGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEE 91 LGSL GKVLLIEN A G + Q GLV LGFP QF HQENAK +E Sbjct: 438763 LGSLWGKVLLIENGAPDEGAAAVSWAQ-----------GLVKLGFPGKQFRHQENAKKKE 438909 Query: 92 ILNSLKYVRP 101 ILNSLKY+ P Sbjct: 438910 ILNSLKYIPP 438939 >gi|472269781|gb|KB714908.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00202, whole genome shotgun sequence Length = 2068787 Score = 152 bits (383), Expect = 1e-35 Identities = 94/189 (49%), Positives = 113/189 (59%), Gaps = 3/189 (1%) Frame = -1 Query: 18 AFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFP 77 A SARP AGGEP+SLG LRGKVLL +NVASL G V DYTQMN+LQRRL P+GLVVLGF Sbjct: 966011 ALSARPPAGGEPMSLGCLRGKVLLFQNVASL*GPKVWDYTQMNQLQRRLRPQGLVVLGFR 965832 Query: 78 CNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPS 137 + F HQENAK+EEILNSL++V G +PN EK EVNG AHPLF R Sbjct: 965831 RHHFRHQENAKSEEILNSLEHVPARGWLQPNLSPSEKGEVNGVQAHPLFVLGRHRAHD-- 965658 Query: 138 DDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPL---RRYSRRFQTIDIEPDIEA 194 P + + ++ +G + + + FQ ++EPDIEA Sbjct: 965657 ---------------RPQVHHPGSGGLQRHRLGL*DLMVCLCAATAAAFQPSNMEPDIEA 965523 Query: 195 LLSQGPSCA 203 LLS GPSCA Sbjct: 965522 LLSWGPSCA 965496 >gi|472269840|gb|KB714849.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00143, whole genome shotgun sequence Length = 2374980 Score = 108 bits (270), Expect = 2e-22 Identities = 69/145 (47%), Positives = 85/145 (58%), Gaps = 4/145 (2%) Frame = +1 Query: 33 GSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGP----RGLVVLGFPCNQFGHQENAK 88 G GKVLL + VASL T +R TQ+N+LQRRLGP L V P + G ++ Sbjct: 1714684 GPPAGKVLLTDQVASL*RTKLRQDTQVNKLQRRLGPGPGPARLPVQAVPAS--GERQEGG 1714857 Query: 89 NEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPK 148 + E +L+ + P GGFEP+F LFE V+ A P L+EALPAP + ATAL+ PK Sbjct: 1714858 DPE---TLRTIGPRGGFEPDFRLFENHLVSSAQVRPPLLRLQEALPAPREHATALLAHPK 1715028 Query: 149 LITWSPVCRNDVAWNFEKFLVGPDG 173 L TWS V V WN KFL GPDG Sbjct: 1715029 L-TWSQVWGEGVGWNLGKFLKGPDG 1715100 >gi|472269298|gb|KB715359.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00653, whole genome shotgun sequence Length = 1047930 Score = 83.6 bits (205), Expect = 6e-15 Identities = 76/193 (39%), Positives = 93/193 (48%), Gaps = 11/193 (5%) Frame = -3 Query: 22 RPL----AGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFP 77 RPL A G P SLG+LR DYTQMN LQ+ L P + Sbjct: 661951 RPLCVHWAAGGPGSLGALRFPAAPCGLRCRSLRHRGLDYTQMNALQQLLVPPVQAL---- 661784 Query: 78 CNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNG---AGAHPLFAFLREALP 134 + Q + + + + ++VR L EV G AGA PL LP Sbjct: 661783 -RE*QEQRHPEFPQAHLTQRWVRAH--------LRPF*EVRGEGRAGATPLHL---PVLP 661640 Query: 135 APSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQ----TIDIEP 190 APSD ATAL T+PK ITWSPVC NDV WN +VGPDGVP+R FQ ++ +P Sbjct: 661639 APSDCATALRTNPKFITWSPVCCNDVTWN---IMVGPDGVPVRSPGPAFQPSTSSLTSKP 661469 Query: 191 DIEALLSQGPSCA 203 A + QGPSCA Sbjct: 661468 CC-ARVPQGPSCA 661433 >gi|472267375|gb|KB717282.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold02576, whole genome shotgun sequence Length = 370331 Score = 81.6 bits (200), Expect = 2e-14 Identities = 48/81 (59%), Positives = 57/81 (70%) Frame = -2 Query: 18 AFSARPLAGGEPVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFP 77 +FSA LA GEP SLGSL+GKVLL ENV+ L GT V DYT +NELQ L P+ LVVLGFP Sbjct: 250930 SFSAHLLACGEPESLGSLQGKVLLFENVSLL*GTMVWDYTPINELQLNLQPQSLVVLGFP 250751 Query: 78 CNQFGHQENAKNEEILNSLKY 98 Q +++E LNSLK+ Sbjct: 250750 VQPV--QGIWRSQESLNSLKF 250694 >gi|472268800|gb|KB715857.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold01151, whole genome shotgun sequence Length = 762929 Score = 80.5 bits (197), Expect = 5e-14 Identities = 48/103 (46%), Positives = 55/103 (53%) Frame = +2 Query: 72 VVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLRE 131 ++LGFPC F QENAKN+EILNSL+YVR G P + GA E Sbjct: 665126 IMLGFPCYHFRRQENAKNQEILNSLRYVRSRVGSSPTSRSWR-------GARTAPRLPGE 665284 Query: 132 ALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGV 174 LP P D ATAL WS VC + VA N EKFLV +GV Sbjct: 665285 TLPGPRDHATALGPRLTFTPWSRVCCSPVAGNLEKFLVDKNGV 665413 >gi|472269737|gb|KB714952.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00246, whole genome shotgun sequence Length = 1829979 Score = 74.3 bits (181), Expect = 4e-12 Identities = 53/142 (37%), Positives = 71/142 (50%), Gaps = 2/142 (1%) Frame = +2 Query: 38 KVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLK 97 +V L+ NVAS G T + Y + +LQR LGP VL FPCNQFG QE N+EI + + Sbjct: 1334969 QVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDTNKEIESFAR 1335148 Query: 98 YVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFL-REALPAPSDDATALMTDPKLITWSP-V 155 + +F +F K V G GAHP F +L RE+ PS + L +W P Sbjct: 1335149 RT-----YGVSFPMFSKVAVTGTGAHPAFKYLIRES*SFPSSSRSWLR------SWLPGA 1335295 Query: 156 CRNDVAWNFEKFLVGPDGVPLR 177 C++ +L G G P R Sbjct: 1335296 CKS-------HWLAG*PGAPSR 1335340 >gi|472269981|gb|KB714708.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00002, whole genome shotgun sequence Length = 10958939 Score = 47.0 bits (110), Expect(2) = 1e-09 Identities = 21/24 (87%), Positives = 23/24 (95%) Frame = +1 Query: 124 PLFAFLREALPAPSDDATALMTDP 147 PLFAFL+EALPAPSDDAT LMT+P Sbjct: 8483422 PLFAFLQEALPAPSDDATVLMTNP 8483493 Score = 45.4 bits (106), Expect = 0.002 Identities = 23/57 (40%), Positives = 29/57 (50%) Frame = +3 Query: 112 FEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFL 168 FEKCEV+G AHP + P PK IT +PV N +AW+F+K L Sbjct: 8483385 FEKCEVDGVQAHPPLCLPPGSSACPQ*RCHCAHDQPKFITGTPV*GNGIAWSFKKLL 8483555 Score = 38.9 bits (89), Expect(2) = 1e-09 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 2/36 (5%) Frame = +2 Query: 170 GPDGVPLRR--YSRRFQTIDIEPDIEALLSQGPSCA 203 GPDG+P RR YS F T EPDI+AL++ G S A Sbjct: 8483558 GPDGLPPRRCRYSHHFPTTATEPDIKALMTPGTSSA 8483665 >gi|472269606|gb|KB715083.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00377, whole genome shotgun sequence Length = 1354867 Score = 60.5 bits (145), Expect = 6e-08 Identities = 33/92 (35%), Positives = 49/92 (53%) Frame = +3 Query: 38 KVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLK 97 +V L+ NVAS T R+Y + EL + GP VL FPCNQFG E ++E+++ + Sbjct: 621918 EVALVVNVASDCQLTDRNYLALQELHKEFGPFHFSVLAFPCNQFGESEPRPSKEVVSFAR 622097 Query: 98 YVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFL 129 + F +F K ++ G+ A P F FL Sbjct: 622098 -----NNYGVTFPIFHKIKILGSEADPAFRFL 622178 >gi|472269128|gb|KB715529.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00823, whole genome shotgun sequence Length = 893735 Score = 58.5 bits (140), Expect = 2e-07 Identities = 31/51 (60%), Positives = 34/51 (66%), Gaps = 3/51 (5%) Frame = +3 Query: 57 TQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYV---RPGGG 104 T++N LQ L P GLVVLGFPCNQFG QE +N EIL LK V P GG Sbjct: 523170 TELNALQEELKPLGLVVLGFPCNQFGKQEPGENSEILPGLK*VPAWNPRGG 523322 Score = 57.8 bits (138), Expect = 4e-07 Identities = 28/45 (62%), Positives = 32/45 (71%) Frame = -2 Query: 58 QMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPG 102 ++N LQ L P G+VVLGFPCNQFG QE KN EIL+ LK V G Sbjct: 487804 ELNALQDELKPSGVVVLGFPCNQFGKQEPGKNSEILSGLK*VPAG 487670 Score = 55.8 bits (133), Expect = 1e-06 Identities = 25/49 (51%), Positives = 32/49 (65%) Frame = +1 Query: 150 ITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLSQ 198 I+W PV +D+ WNFEKFLVGPDGVP+ R+ R ++ DI L Q Sbjct: 524920 ISWDPVKVHDIRWNFEKFLVGPDGVPVMRWFHRTPISTVKSDILEYLKQ 525066 Score = 54.7 bits (130), Expect = 3e-06 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = -1 Query: 127 AFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTI 186 + L+ + P SD L+ + W P+ +D+ WNFEKFLVGPDGVP+ R+ + Sbjct: 486167 SLLQNSCPPTSD----LLGSASQLFWEPMKVHDIRWNFEKFLVGPDGVPVMRWFHKAPVS 486000 Query: 187 DIEPDIEALLSQ 198 ++ DI L Q Sbjct: 485999 TVKSDILEYLKQ 485964 Score = 48.9 bits (115), Expect = 2e-04 Identities = 21/34 (61%), Positives = 25/34 (73%) Frame = -2 Query: 97 KYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLR 130 +YVRPGGGF PNF LFEK +VNG +F FL+ Sbjct: 487213 RYVRPGGGFVPNFQLFEKGDVNGEKEQKVFTFLK 487112 Score = 44.7 bits (104), Expect = 0.003 Identities = 19/34 (55%), Positives = 24/34 (70%) Frame = +1 Query: 97 KYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLR 130 +YVRPG G+ PNF LFEK +VNG +F FL+ Sbjct: 523705 RYVRPGRGYVPNFQLFEKGDVNGEKEQKVFTFLK 523806 >gi|472266571|gb|KB718086.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold03380, whole genome shotgun sequence Length = 238997 Score = 58.2 bits (139), Expect = 3e-07 Identities = 30/79 (37%), Positives = 46/79 (58%) Frame = -3 Query: 125 LFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQ 184 LF+ L+ + P S+ L+ P + W P+ +D+ WNFEKFLVGPDGVP+ R+ R Sbjct: 238545 LFSPLQNSCPPTSE----LLGSPGRLFWEPMKVHDIRWNFEKFLVGPDGVPIMRWYHRTT 238378 Query: 185 TIDIEPDIEALLSQGPSCA 203 ++ DI A + + + A Sbjct: 238377 VNTVKMDILAYMRRQAALA 238321 >gi|472268639|gb|KB716018.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold01312, whole genome shotgun sequence Length = 700520 Score = 56.2 bits (134), Expect = 1e-06 Identities = 26/40 (65%), Positives = 30/40 (75%) Frame = +1 Query: 58 QMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLK 97 ++N LQ L P GLV+LGFPCNQFG QE +N EIL SLK Sbjct: 633844 ELNALQEELEPFGLVILGFPCNQFGKQEPGENSEILPSLK 633963 Score = 48.5 bits (114), Expect = 2e-04 Identities = 21/40 (52%), Positives = 26/40 (65%) Frame = +3 Query: 97 KYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAP 136 +YVRPGGGF PNF LFEK +VNG + FL+ + P Sbjct: 634428 RYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKVSAQPP 634547 >gi|472268710|gb|KB715947.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold01241, whole genome shotgun sequence Length = 781753 Score = 52.4 bits (124), Expect = 2e-05 Identities = 43/147 (29%), Positives = 58/147 (39%), Gaps = 40/147 (27%) Frame = +2 Query: 24 LAGGEPVSLGSL--RGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQF 81 + G + SL L RG V ++ NVAS G T +YTQ+ +L R GL +L FPCNQF Sbjct: 571898 VGGPDLASLAHLTFRGFVCIVTNVASQ*GKTEVNYTQLVDLHARFAECGLRILAFPCNQF 572077 Query: 82 GH--------------------------------------QENAKNEEILNSLKYVRPGG 103 G QE N EI Sbjct: 572078 GRQVRGWLCPWLCPRVSRCGERGPTGAQAPPHSPPHPCLPQEPGSNAEIKEF------AA 572239 Query: 104 GFEPNFMLFEKCEVNGAGAHPLFAFLR 130 G+ F ++ K VNG AHPL+ +++ Sbjct: 572240 GYNVKFDMYSKICVNGDDAHPLWKWMK 572320 >gi|472269918|gb|KB714771.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00065, whole genome shotgun sequence Length = 3469026 Score = 42.0 bits (97), Expect = 0.021 Identities = 19/27 (70%), Positives = 20/27 (74%) Frame = -3 Query: 83 HQENAKNEEILNSLKYVRPGGGFEPNF 109 HQEN KN+ ILN LKYV GG EPNF Sbjct: 3158092 HQENTKNKGILNFLKYVPSGGRLEPNF 3158012 Score = 33.5 bits (75), Expect = 7.5 Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 2/81 (2%) Frame = -1 Query: 29 PVSLGSLRGKVLLIENVASLXGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFG--HQEN 86 PV LG L GKVLL+ENVA+L + M+ R GL V+G P N G Sbjct: 3158247 PVCLGPL*GKVLLLENVATLRNNRLGLQPWMS--CHRASA*GLGVVGSPYN*SGIRRTPR 3158074 Query: 87 AKNEEILNSLKYVRPGGGFEP 107 K I +S+ + G G+ P Sbjct: 3158073 TKGS*IFSSMSH--QGVGWNP 3158017 >gi|472269789|gb|KB714900.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00194, whole genome shotgun sequence Length = 1879746 Score = 35.4 bits (80), Expect = 2.0 Identities = 18/55 (32%), Positives = 26/55 (47%) Frame = +2 Query: 121 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVP 175 G +P F + LP P ++A A +P L W + + + K L GP GVP Sbjct: 1034114 GENPHHTFAHKGLPRPREEAKARKREPALTHWKSITLQILNAHLCKILSGPWGVP 1034278 >gi|472269731|gb|KB714958.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold00252, whole genome shotgun sequence Length = 1638346 Score = 34.7 bits (78), Expect = 3.4 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -3 Query: 132 ALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFL 168 AL P D A +L +P L W+P R A +F KFL Sbjct: 1141961 ALAGPPDSAASLPQEPALQAWTPRLRGGAAMDFSKFL 1141851 >gi|471700889|gb|APMU01161865.1| Leptonychotes weddellii contig161865, whole genome shotgun sequence Length = 3861 Score = 33.9 bits (76), Expect = 5.7 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 9/56 (16%) Frame = +3 Query: 83 HQENAKNEEILNSLKYVRPGG---------GFEPNFMLFEKCEVNGAGAHPLFAFL 129 +Q N +N +++ S +P G PNF +FE+C N AG PL FL Sbjct: 585 NQINFQNTDVIMSHTQSKPHATPFKTQLLLGLHPNFQIFERCLHNTAGHSPLHTFL 752 >gi|472266612|gb|KB718045.1| Leptonychotes weddellii isolate WS11-02 unplaced genomic scaffold scaffold03339, whole genome shotgun sequence Length = 236348 Score = 33.5 bits (75), Expect = 7.5 Identities = 43/155 (27%), Positives = 54/155 (34%), Gaps = 18/155 (11%) Frame = +1 Query: 67 GPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLF 126 GP G + L PC+Q H+E K + I SL P GG C + A A P Sbjct: 5755 GPGGRLQLWPPCSQKNHKELQKGKIIQPSLDVRSPVGG----------CSL--ASAQP*A 5898 Query: 127 AFLREALP-------APSDDATALMT-----DPKLITWSP----VCRNDVAWNFEKFLVG 170 A R L AP P L++WSP V R F Sbjct: 5899 AVWRSKLTPHLWPPRAPQSPGVGWQNAPHRPPPSLVSWSPPPSSVPRGSAIPPFHSATAA 6078 Query: 171 PDG--VPLRRYSRRFQTIDIEPDIEALLSQGPSCA 203 D P R R I P + +LS+ P+ A Sbjct: 6079 GDDWKAPERLLPRSHSAGSIRPGTQPVLSRAPNQA 6183 Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge nome.fa Posted date: Oct 18, 2013 6:11 PM Number of letters in database: 3,087,506,849 Number of sequences in database: 5788 Database: /cursos/BI/genomes/project_2014/Leptonychotes_weddellii/ge nome.fa.01 Posted date: Oct 18, 2013 6:11 PM Number of letters in database: 69,379,310 Number of sequences in database: 10,922 Lambda K H 0.321 0.139 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 735,966,136 Number of Sequences: 16710 Number of extensions: 11576377 Number of successful extensions: 40162 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 591 Number of HSP's successfully gapped in prelim test: 368 Number of HSP's that attempted gapping in prelim test: 37554 Number of HSP's gapped (non-prelim): 7300 length of query: 203 length of database: 1,052,295,386 effective HSP length: 125 effective length of query: 78 effective length of database: 1,050,206,636 effective search space: 81916117608 effective search space used: 81916117608 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 74 (33.1 bits)