gi|408541802|gb|JH947130.1|.trna1 (897816-897885) Length: 70 bp Type: Arg Anticodon: GCG at 33-35 (897848-897850) Score: 23.45 Possible pseudogene: HMM Sc=25.82 Sec struct Sc=-2.37 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCGATCCCAGAGGtgTGTGGTTCAAATCCACCAGATCG Str: >.>>>>>....>>.......<<...>>>...........<<<.......>>>.......<<<<<<<<.<. gi|408541802|gb|JH947130.1|.trna2 (1048889-1048959) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (1048921-1048923) Score: 81.62 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna3 (1049407-1049477) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (1049439-1049441) Score: 81.62 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna4 (1050018-1050088) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (1050050-1050052) Score: 79.74 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGACCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna5 (1400617-1400687) Length: 71 bp Type: Cys Anticodon: ACA at 34-36 (1400650-1400652) Score: 20.44 * | * | * | * | * | * | * | Seq: GTTCTGGTGGCCTAATGGCAAGGTGCTGcAACTACAATTCCAGAGGCgAATGGTTCAAATCCACCAGATGC Str: ..>>>>>..>>>>.......<<<<.>>>..>.......<.<<<.......>>>.......<<<<<<<<... gi|408541802|gb|JH947130.1|.trna6 (1844389-1844463) Length: 75 bp Type: Gly Anticodon: GCC at 34-36 (1844422-1844424) Score: 23.86 * | * | * | * | * | * | * | Seq: GGAGTTGgTGGCCTAGTGGTAAGTAATCACATTGCCAATGCAAAGGtCGGTGGTTCAAATCTACCatCTGCTCCT Str: >>>>>.>.....>>.......<<...>..>>.......<<..<.....>>>>>.......<<<<<..<.<<<<<. gi|408541802|gb|JH947130.1|.trna7 (2237560-2237642) Length: 83 bp Type: His Anticodon: GTG at 34-36 (2237593-2237595) Score: 22.55 * | * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTCTGTAGGGAGTTGTGCTGTGAACTCAAAGGTGGGGCCCCCtCTgGCGGTTCGAACCCACCAGcAGCT Str: >>>>>>>...>>>........<<<..>>>.>.......<.<<<..>.>>..<<.<...>...>>.......<<<<<<<.<<<. gi|408541802|gb|JH947130.1|.trna8 (3251797-3251863) Length: 67 bp Type: Asp Anticodon: GTC at 34-36 (3251830-3251832) Score: 24.37 * | * | * | * | * | * | * Seq: GGTCTGGTGGCTTAGTGGCAAAGAGtTTGTGCTGTCAACCCAAAGATGGTTCGAATCCACCAGCTTA Str: >>.>>>>...>>>.......<<<...>>>.>.......<.<<<...>>>.......<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna9 (4629403-4629474) Length: 72 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 20.41 Possible pseudogene: HMM Sc=24.71 Sec struct Sc=-4.30 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGGAGCTGcAACTACAATCCCAGAGGCgCATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>............<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna10 (5279754-5279825) Length: 72 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 20.41 Possible pseudogene: HMM Sc=24.71 Sec struct Sc=-4.30 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGGAGCTGcAACTACAATCCCAGAGGCgCATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>............<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna11 (5297077-5297147) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (5297109-5297111) Score: 20.00 * | * | * | * | * | * | * | Seq: GCTCTGGTGTTTTAGTGTTAAGGAATAGTGCTGCCAACTCAAAGGtgTATGGTTCAAATCCATCTAGTGCT Str: >>.>>>>..>>>>.......<<<<.>.>.>.......<.<.<......>>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna12 (5723303-5723374) Length: 72 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 21.51 Possible pseudogene: HMM Sc=32.84 Sec struct Sc=-11.33 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGGAGCTGcAACTACAATCCCAGAGGtCCACGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>............<<<........>>.......<<.<<<<<.<<. gi|408541802|gb|JH947130.1|.trna13 (5830706-5830776) Length: 71 bp Type: Phe Anticodon: GAA at 33-35 (5830738-5830740) Score: 25.47 Possible pseudogene: HMM Sc=38.01 Sec struct Sc=-12.54 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGAAATCCCAGAGGtACGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna14 (6452678-6452748) Length: 71 bp Type: Ser Anticodon: GCT at 33-35 (6452710-6452712) Score: 20.36 Possible pseudogene: HMM Sc=21.56 Sec struct Sc=-1.20 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCTTAGTAGTAAGGAGTTGTGCTGCTAACCCAAAGGCaTATGGTTCGAATCCACCAGCtGCT Str: >>.>>>>...>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<..<<. gi|408541802|gb|JH947130.1|.trna15 (6794754-6794824) Length: 71 bp Type: Ser Anticodon: ACT at 33-35 (6794786-6794788) Score: 23.66 Possible pseudogene: HMM Sc=34.37 Sec struct Sc=-10.71 * | * | * | * | * | * | * | Seq: GTCCTGATGGCACAATGGTtAAGTGCTGGGCTACTAACCCGGAGGtCTGTGGTTCAGACCCACCAGTGACT Str: >>>.>....>>...........<<.>>>>>.......<<<<<......>>>>.......<<<<..<.<<<. gi|408541802|gb|JH947130.1|.trna16 (7059569-7059642) Length: 74 bp Type: Gly Anticodon: GCC at 33-35 (7059601-7059603) Score: 23.49 Possible pseudogene: HMM Sc=30.23 Sec struct Sc=-6.74 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGGAATTGCACTGCCAGTGCAAAGGtACCTAGTTCGAATCCACcaGCTGCTTCA Str: >...>>>...>>>.......<<<..>>>>>.......<<<<<.....>.>.>.......<.<...<<<<...<. gi|408541802|gb|JH947130.1|.trna17 (7881856-7881926) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (7881888-7881890) Score: 21.47 Possible pseudogene: HMM Sc=31.04 Sec struct Sc=-9.57 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCTTAGTCGTAAGGAGTTAGGCTGCCAACCCAAAGGCAcTTGGTTCGAATCCATCAGCTGCT Str: >>..>.>...>>>.......<<<..>>.>>.......<<.<<....>..>>>.......<<<<<.<..<<. gi|408541802|gb|JH947130.1|.trna18 (8854407-8854477) Length: 71 bp Type: Asp Anticodon: GTC at 33-35 (8854439-8854441) Score: 21.96 Possible pseudogene: HMM Sc=28.29 Sec struct Sc=-6.33 * | * | * | * | * | * | * | Seq: GCTCTGGTAGCTTAGTGGTGAAGAGTTGGACTGTCAAACCAAAGGCACaTGGTTCAAATCCGACAGCTGCT Str: >>..>.>...>>>.......<<<..>>>>.........<<<<.....>..>>.......<<<.<.<..<<. gi|408541802|gb|JH947130.1|.trna19 (9134278-9134348) Length: 71 bp Type: Asn Anticodon: GTT at 35-37 (9134312-9134314) Score: 20.14 * | * | * | * | * | * | * | Seq: GGCTcTGGTGGCCTAGTGGGtAAGGAGTTATGCTGTTAACCTGAAGGCaAATGGTTTGAATCCACCAGCTG Str: >>>>..>>...>>>........<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna20 (9697508-9697577) Length: 70 bp Type: Asp Anticodon: GTC at 33-35 (9697540-9697542) Score: 24.24 Possible pseudogene: HMM Sc=9.06 Sec struct Sc=15.18 * | * | * | * | * | * | * Seq: CTGCTGGTGACTTACTGGTAAGGAGTTGTGCTGTCAACTCAAAGGCtCATGGTTCAAATCCACCAGCTGC Str: >.>>>>>...>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<<.<. gi|408541802|gb|JH947130.1|.trna21 (10268694-10268763) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (10268727-10268729) Score: 26.33 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCCTAGTGGTAAGGCCTTGTGCTGCCAACCTAAAGGCtTTCAGTTCGAATCTGCCAGCTG Str: >>>>..>>..>>>>.......<<<<.>>>.>.......<.<<<.......>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna22 (10350642-10350712) Length: 71 bp Type: Glu Anticodon: TTC at 33-35 (10350674-10350676) Score: 23.04 Possible pseudogene: HMM Sc=30.04 Sec struct Sc=-7.00 * | * | * | * | * | * | * | Seq: GCAGTTGTGGTTCAATGGCAGAATTCTCACTTTTCACGCTGGAGACCAAGGTTCGATTCtCAAGCAATGCA Str: >>>.>>>..>>>>.......<<<<.>>..>.......<..<<....>..>>.......<.<..<<<<<<<. gi|408541802|gb|JH947130.1|.trna23 (11961687-11961760) Length: 74 bp Type: Gln Anticodon: CTG at 33-35 (11961719-11961721) Score: 20.45 * | * | * | * | * | * | * | Seq: CCTCCAGTGACCTAGTGGCAAGGAGTTGTGCCCTGAACTCACAGGCCTGtGGTTCAAATCCctCAGCTGTTTCA Str: ....>>>...>>>.......<<<...>>.>.......<.<<.....>>>.>>.......<<..<<<<<<..... gi|408541802|gb|JH947130.1|.trna24 (13322958-13323028) Length: 71 bp Type: Arg Anticodon: GCG at 33-35 (13322990-13322992) Score: 26.18 Possible pseudogene: HMM Sc=34.68 Sec struct Sc=-8.50 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGGAATTGTGCTGCGAACCTAAAGGCaCAAGGTTCGAATCCATCTGTGGCC Str: >>>.>>>...>>>.......<<<..>>>.>.......<.<<<......>.>>.......<<.<<<<.<<<. gi|408541802|gb|JH947130.1|.trna25 (13730611-13730682) Length: 72 bp Type: Cys Anticodon: ACA at 34-36 (13730644-13730646) Score: 20.23 Possible pseudogene: HMM Sc=22.16 Sec struct Sc=-1.93 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGGAGCTGcAGCTACAATCCCAGAGGCTcACGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>..>.......<.<<<....>...>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna26 (13994953-13995021) Length: 69 bp Type: Gly Anticodon: GCC at 33-35 (13994985-13994987) Score: 22.17 Possible pseudogene: HMM Sc=21.61 Sec struct Sc=0.56 * | * | * | * | * | * | * Seq: GCTCTGGTGGCTTAGTGGTAAGGAATTGTGCTGCCAACCCAAAGGCAGGTGaTTCAAACCCACCAGGCA Str: >>.>>>>...>>>.......<<<..>>>.>.......<.<<<.....>>..........<<.<<<<<<. gi|408541802|gb|JH947130.1|.trna27 (14463342-14463411) Length: 70 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 21.18 * | * | * | * | * | * | * Seq: AGCTCTGgTGGCCTAGTGGTAAGGAGTTGTGCTgCCTAACCAAAAGATGGTGGTTCGAACCCACCAGCTG Str: >>>>.......>>>.......<<<..>>..>........<..<<....>>>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna28 (15329979-15330049) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (15330011-15330013) Score: 21.16 Possible pseudogene: HMM Sc=31.58 Sec struct Sc=-10.42 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACACTGCACTGCAATCCCAGAGGtATGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.....>..>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna29 (16171683-16171765) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (16171717-16171719) Score: 51.58 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCCGAGCGGTctAAGTCACTGCGTTCAGGTCGCAGTCTCCCCTGGAGGTGTGGGTTTGAATCCCACTCCTCACA Str: >>.>>>>..>.>...........<.<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna30 (16740924-16740999) Length: 76 bp Type: Ala Anticodon: GGC at 37-39 (16740960-16740962) Score: 23.27 Possible pseudogene: HMM Sc=19.55 Sec struct Sc=3.72 * | * | * | * | * | * | * | * Seq: GGGAGctctGGTGGCCTAATGGTAAGGAGTTGTGCTGGCAACCCAAAGAtGCACAGTTCAAATCCTTGCTCTTCCT Str: >>>>>....>>...>>>.......<<<..>>>.>.......<.<<<.....>>..>.......<..<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna31 (18033274-18033348) Length: 75 bp Type: Gly Anticodon: GCC at 34-36 (18033307-18033309) Score: 26.08 Possible pseudogene: HMM Sc=23.75 Sec struct Sc=2.33 * | * | * | * | * | * | * | Seq: GCTTCGGTGGCCCAGTGGAtAAGGAGTTGAGCTGCCAACCCAAAGGcAGATGGTTCAAATTCACcaCCCGCAATG Str: >.>.>>>...>>..........<<..>>>.>.......<.<<<.....>.>>>.......<<<...<<<<.<.<. gi|408541802|gb|JH947130.1|.trna32 (20661702-20661772) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (20661734-20661736) Score: 20.39 Possible pseudogene: HMM Sc=29.64 Sec struct Sc=-9.25 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCAATCTCAGAGGtAGGTGGTTCAAATCCACCAGGTGCT Str: >>.>>.>....>>.......<<...>>>...........<<<.....>.>>>.......<<<<<.<<.<<. gi|408541802|gb|JH947130.1|.trna33 (21653365-21653435) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (21653397-21653399) Score: 22.80 Possible pseudogene: HMM Sc=19.18 Sec struct Sc=3.62 * | * | * | * | * | * | * | Seq: GCTTTTGTGGCCTAGTGGTAAGGAGTTGCGCTGCCAACCCAAACACaAGTGGTTTGAATCCACCAGCTGCT Str: >>..>>>...>>>.......<<<..>>>.>.......<.<<<......>>>>.......<<<<<<<..<<. gi|408541802|gb|JH947130.1|.trna34 (21830753-21830823) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (21830785-21830787) Score: 22.80 Possible pseudogene: HMM Sc=20.36 Sec struct Sc=2.44 * | * | * | * | * | * | * | Seq: GCACTGATGATTCTGGGGCAGAATTCTTGCCTTCCATGAGAGGGATCTGGGTTCAATTCCCAGCCAAGGTA Str: >>..>>...>>>>.......<<<<.>>>.>.......<.<<<....>>>>>.......<<<<<.<<..<<. gi|408541802|gb|JH947130.1|.trna35 (21903834-21903904) Length: 71 bp Type: Gly Anticodon: GCC at 34-36 (21903867-21903869) Score: 20.10 Possible pseudogene: HMM Sc=22.43 Sec struct Sc=-2.33 * | * | * | * | * | * | * | Seq: TCTCTGGTGGCCTAGTGGTaAAGATGTTGGGCTGCCCACCCAAAGGCaTAGGGTTCAAATCCACCAGCTGC Str: >..>>>>..>.>>........<<.<.>>>>>.......<<<<<........>>.......<<.<<<<..<. gi|408541802|gb|JH947130.1|.trna36 (21970562-21970633) Length: 72 bp Type: Asn Anticodon: ATT at 34-36 (21970595-21970597) Score: 29.80 Possible pseudogene: HMM Sc=25.27 Sec struct Sc=4.53 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCGTAGTTGGTAGCAAGTTGTGCTATTAACCCAAAGGtTGTGcAGTTCGAACCCACCAAAGCT Str: >>>.>.>....>>........<<...>>>.>.......<.<<<.....>>>..>.......<<<<<<.<<<. gi|408541802|gb|JH947130.1|.trna37 (22807013-22807083) Length: 71 bp Type: Asn Anticodon: GTT at 33-35 (22807045-22807047) Score: 24.30 Possible pseudogene: HMM Sc=27.24 Sec struct Sc=-2.94 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTCTAGTGGTAAGGAATTGGGCTGTTAACCCAATGACTTGcAGTTCAAATCCACCAGCTGCT Str: >>..>.>...>>>.......<<<..>>>>>.......<<<<<.....>>..>.......<<<.<.<..<<. gi|408541802|gb|JH947130.1|.trna38 (26259894-26259966) Length: 73 bp Type: Cys Anticodon: GCA at 33-35 (26259926-26259928) Score: 20.98 Possible pseudogene: HMM Sc=16.13 Sec struct Sc=4.85 * | * | * | * | * | * | * | Seq: GCTCAGGTGGTCTAGTGGTAAGAAGCTGTGCTGCAATCCCAAAAGcATGTGGTTCAAAACCATcACCTGCTCT Str: >..>>>>...>>>.......<<<...>>.>.......<.<<......>>>>>.......<<<<.<<<<<..<. gi|408541802|gb|JH947130.1|.trna39 (26861881-26861954) Length: 74 bp Type: Gly Anticodon: GCC at 33-35 (26861913-26861915) Score: 25.96 * | * | * | * | * | * | * | Seq: ACATTGGTGGCTGAGTGGTAAAGGGTTGTTTTGCCAACCCAAAGATGTGtGGTTCAAATCCacCACCTGCTCTG Str: >.>.>>>...>>.........<<..>>>...........<<<....>>>.>>.......<<..<<<<<<.<.<. gi|408541802|gb|JH947130.1|.trna40 (27418618-27418686) Length: 69 bp Type: Val Anticodon: GAC at 34-36 (27418651-27418653) Score: 20.18 Possible pseudogene: HMM Sc=22.78 Sec struct Sc=-2.60 * | * | * | * | * | * | * Seq: GCTCTAATGGTATAGTGCAtATTGTGTTAGACTGACAACCAAAAGGtTGATGGTTCAAATCTATCAGTG Str: >>>......>>>..........<<<.>>.>.........<.<<.....>>>>>.......<<<<<<<<. gi|408541802|gb|JH947130.1|.trna41 (27422282-27422352) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (27422314-27422316) Score: 22.63 * | * | * | * | * | * | * | Seq: GCTCTAGTGACTTAGTGGTAAGGAATTGCACTGCCAATGCAAAGGTATGcAGTTTGAATCCATCAGCTGCT Str: >>..>.>...>>>.......<<<..>>>>>.......<<<<<....>>>..>.......<<<<<.<..<<. gi|408541802|gb|JH947130.1|.trna42 (27453765-27453834) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (27453797-27453799) Score: 20.07 Possible pseudogene: HMM Sc=33.79 Sec struct Sc=-13.72 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGTACGCGGTTCAAATCCACCAGATGT Str: ..>>>>>..>.>>.......<<.<.>>>...........<<<..>><<..>>.......<<.<<<<<... gi|408541802|gb|JH947130.1|.trna43 (29625897-29625969) Length: 73 bp Type: Ser Anticodon: GCT at 34-36 (29625930-29625932) Score: 22.64 * | * | * | * | * | * | * | Seq: ACTCTGTTGACCTAGTGGGtATGGAATTGTGCTGCTAACTCAAAGGcAAGTGGTTCAAATCCACCAGCTATTC Str: >.>...>...>>..........<<..>>>.>.......<.<<<......>>>>.......<<<<.<...<.<. gi|408541802|gb|JH947130.1|.trna44 (32041698-32041766) Length: 69 bp Type: Gly Anticodon: GCC at 33-35 (32041730-32041732) Score: 23.43 Possible pseudogene: HMM Sc=8.85 Sec struct Sc=14.58 * | * | * | * | * | * | * Seq: CCCTGACAGCCTAGTGGGtAAGGTGTTGGACTGCCAATCCAAAGGcATGTGGTTCAAATTCACAAGCTG Str: ..>>....>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<... gi|408541802|gb|JH947130.1|.trna45 (35314632-35314703) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (35314664-35314666) Score: 46.67 * | * | * | * | * | * | * | Seq: GGGGGTATAGCTCAGTGGGAGAGCATTGGACTGCAGATCAAGAGAtCTCTGGTTCAGATCTGGGTGCCTCCT Str: >>>>>>>..>>>>.......<<<<.>>.>>.......<<.<<.....>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna46 (36568549-36568617) Length: 69 bp Type: Gly Anticodon: ACC at 33-35 (36568581-36568583) Score: 26.78 * | * | * | * | * | * | * Seq: TTCTGGTGGCCTAGTGGGtAAGGAGTTAGGTTACCAACCGAAAGAtAAGTGGTTCAAACCCACTAGCAG Str: >.>>.....>>>........<<<..>>.>>.......<<.<<.....>>>>>.......<<<<<<<.<. gi|408541802|gb|JH947130.1|.trna47 (36787197-36787266) Length: 70 bp Type: Gly Anticodon: GCC at 33-35 (36787229-36787231) Score: 22.16 Possible pseudogene: HMM Sc=20.82 Sec struct Sc=1.34 * | * | * | * | * | * | * Seq: GCTCTGATAGCCTAGTGGTAAGGAGTTGTGCTGCCAACCCAAATGCTtGAGGTTCAAATCCACCAGCTCT Str: >..>>>....>>>.......<<<..>>>.>.......<.<<<....>...>>.......<<<.<<<..<. gi|408541802|gb|JH947130.1|.trna48 (37536528-37536598) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (37536560-37536562) Score: 22.77 Possible pseudogene: HMM Sc=24.51 Sec struct Sc=-1.74 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTCTAGTGGCAAGAAGCTGCACTGCCATCCCAGAGGCaTGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna49 (40019091-40019161) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (40019123-40019125) Score: 20.90 Possible pseudogene: HMM Sc=35.26 Sec struct Sc=-14.36 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGATGCTGCACTGCAATCCCAGAGGTACGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<..>><<..>>.......<<.<<<<<.<<. gi|408541802|gb|JH947130.1|.trna50 (40547683-40547753) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (40547715-40547717) Score: 22.08 Possible pseudogene: HMM Sc=32.69 Sec struct Sc=-10.61 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTATGGGGCTGTGCTGCCAACCCcaAGAGCATAGGTTCGAATCCATCAGCTGCT Str: >>..>.>...>>.........<<..>>>.>.......<.<..<<...>>.>>.......<<<<<.<..<<. gi|408541802|gb|JH947130.1|.trna51 (42538642-42538712) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (42538674-42538676) Score: 22.42 Possible pseudogene: HMM Sc=23.02 Sec struct Sc=-0.60 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTCTAGTGGCAAGAAGCTGCACTGCAATTCCAGAGGtCTGCAGTTTAAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>.>.......<.<<<.....>>..>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna52 (43391757-43391826) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (43391790-43391792) Score: 20.75 Possible pseudogene: HMM Sc=3.60 Sec struct Sc=17.15 * | * | * | * | * | * | * Seq: AGCTCTGgTGGCCGATTGGTAAGGTGCTGCCCTGCCAAGGCAAAAGcAGGTGGTTCAGATCCATCAGCTG Str: >>>>......>>>.........<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna53 (43507497-43507567) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (43507529-43507531) Score: 31.35 Possible pseudogene: HMM Sc=39.30 Sec struct Sc=-7.95 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCGCAGAGGtCCGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>>.........<<<<........>>.......<<.<<<<<.<<. gi|408541802|gb|JH947130.1|.trna54 (44094416-44094486) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (44094448-44094450) Score: 53.90 * | * | * | * | * | * | * | Seq: GCATTGGTAGTTTAGTGGTAGAATTCTTGTCTTCCACACAGGAGACCTGGGTTCAATTCTCAGTCAGAGTA Str: >>.>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna55 (44447196-44447267) Length: 72 bp Type: Ser Anticodon: GCT at 33-35 (44447228-44447230) Score: 25.12 Possible pseudogene: HMM Sc=28.30 Sec struct Sc=-3.18 * | * | * | * | * | * | * | Seq: GCCATTGTGGCACAATGGTtAAGCACTCAGTTGCTAAATGAAAGGtTGGGGGTTCAAACCCACTCAGTGGAT Str: .>>>>>>..>>...........<<..>>>.........<<<......>>.>>.......<<.<<<<<<<<.. gi|408541802|gb|JH947130.1|.trna56 (44448590-44448660) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (44448622-44448624) Score: 21.56 Possible pseudogene: HMM Sc=27.99 Sec struct Sc=-6.43 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCGCTGCAATCCCAGAGGtATGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>.>.......<.<<<.....>..>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna57 (44638392-44638462) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (44638424-44638426) Score: 26.09 Possible pseudogene: HMM Sc=34.41 Sec struct Sc=-8.32 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGATGCTGCACTGCAGTTCCAGAGGTACGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>.>.......<.<<<..>><<..>>.......<<.<<<<<.<<. gi|408541802|gb|JH947130.1|.trna58 (44940413-44940482) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (44940446-44940448) Score: 20.52 Possible pseudogene: HMM Sc=16.41 Sec struct Sc=4.11 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCCAAGTGGTAAGGAGTTGCACTGCCAATCCAAAGGCTcAAGGTTCAAATACACCAGCTG Str: >>>>..>>...>>.........<<..>>>.>.......<.<<<....>...>.........<<<<<<<<. gi|408541802|gb|JH947130.1|.trna59 (45121103-45121173) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (45121135-45121137) Score: 23.40 Possible pseudogene: HMM Sc=29.03 Sec struct Sc=-5.63 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCAATTCCAGAGGtgTGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>.>.......<.<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna60 (45465391-45465463) Length: 73 bp Type: Cys Anticodon: ACA at 34-36 (45465424-45465426) Score: 29.15 Possible pseudogene: HMM Sc=33.44 Sec struct Sc=-4.29 * | * | * | * | * | * | * | Seq: CCTTGTGTAGTGTAATAGTtAGCACACTCTGCTACAAACCAAAAGGtTGGGGGTTTGAATCCACCCAGAAGCA Str: .>>>.>>..>>>>........<<<<..>..>.......<..<......>>.>>.......<<.<<<<.<<<.. gi|408541802|gb|JH947130.1|.trna61 (45508882-45508952) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (45508914-45508916) Score: 20.37 Possible pseudogene: HMM Sc=18.60 Sec struct Sc=1.77 * | * | * | * | * | * | * | Seq: GCACCGGTGACCTGGTGGTAAGGATCTGCACTGCCAATCCACATATACGTGGTTCGAATCCTCCAGTTGCT Str: >>>.>.>...>>>.......<<<...>>.>.......<.<<.......>.>>.......<<.<<.<.<<<. gi|408541802|gb|JH947130.1|.trna62 (46471234-46471310) Length: 77 bp Type: Ala Anticodon: GGC at 36-38 (46471269-46471271) Score: 25.73 * | * | * | * | * | * | * | * Seq: GGAGCtctAGTGGCCTGGTGGTAAGGAGTTGGGATGGCAACCCAAAGATCTGgGGTTCAAACCCacCAGCTGCTCCA Str: >>>>>...>>...>>>.......<<<..>>>>>.......<<<<<....>>>.>>.......<<..<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna63 (47316032-47316102) Length: 71 bp Type: Tyr Anticodon: GTA at 33-35 (47316064-47316066) Score: 24.21 Possible pseudogene: HMM Sc=33.37 Sec struct Sc=-9.16 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACACTGCACTGTAATCCCAGAGGtATGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna64 (47895333-47895403) Length: 71 bp Type: Ser Anticodon: GCT at 34-36 (47895366-47895368) Score: 23.76 * | * | * | * | * | * | * | Seq: GCCTGATAGTGCAAATGGTtACCGTGTTCAACTGCTAAACAAAAGGtTGGTGATTCAAGTCCACCCAGGCA Str: >>>>>...>>>...........<<<.>>.............<<.....>>>>.........<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna65 (48202594-48202664) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (48202626-48202628) Score: 24.00 Possible pseudogene: HMM Sc=33.54 Sec struct Sc=-9.54 * | * | * | * | * | * | * | Seq: ACATTTGTAGTTCAGTGGTAGAGTTCTTGCCTTCCATGTGAGAGACCGGGGTTCACTTCCTGACCAATGCA Str: .>>>>.>..>>>>.......<<<<.>>>>>.......<<<<<......>>>.......<<<..<.<<<<.. gi|408541802|gb|JH947130.1|.trna66 (48317433-48317511) Length: 79 bp Type: Ser Anticodon: GCT at 33-35 (48317465-48317467) Score: 35.62 * | * | * | * | * | * | * | * Seq: GTCTCAGTGGCACAGTGGTcAATGATTTGACTGCTAATCAAAAGAtTGGTAGTTCAAATccatcagCCTCTCTGAGACA Str: >>>>>>>...>>..........<<.>>>>>.......<<<<<.....>>..>..............<..<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna67 (48759523-48759453) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (48759491-48759489) Score: 20.55 Possible pseudogene: HMM Sc=19.16 Sec struct Sc=1.39 * | * | * | * | * | * | * | Seq: ACCCTGGTGGCCTAGTGGTAAGGAGTTGTGCTGCCAACTCAAAGGCAcGCAGTTCAAATCTATCCGCTGCT Str: .>..>>>...>>>.......<<<..>>>.>.......<.<<<....>...>>.......<<.<<<<..<.. gi|408541802|gb|JH947130.1|.trna68 (48196355-48196273) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (48196321-48196319) Score: 60.86 * | * | * | * | * | * | * | * | Seq: ATCAGGATGGCTGAGCGGTctAAGGCGCTGCGTTCAGGTCGCAGTCTCCCCTGGAGGCGTGGGTTCGAATCTCACTCCTGACA Str: .>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>...<<<<..>>>>>.......<<<<<<<<<<<.. gi|408541802|gb|JH947130.1|.trna69 (47238668-47238599) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (47238635-47238633) Score: 26.73 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCTTAGTGGTAAAGAATTGTGCTGCCAACCCAAAAGCaAATGGTTCGAATCCACCAGCTG Str: >>>>..>>...>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna70 (47095183-47095113) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (47095151-47095149) Score: 24.60 Possible pseudogene: HMM Sc=30.52 Sec struct Sc=-5.92 * | * | * | * | * | * | * | Seq: GCATTGATGGCCTAGTGGCAAGACGCTGGGCTGCAATCCCAAAGGCaCATAGTTCAAATCCACCTGATGCT Str: >>>>>>...>.>>.......<<.<..>>>>.......<<<<........>.>.......<.<..<<<<<<. gi|408541802|gb|JH947130.1|.trna71 (46285594-46285521) Length: 74 bp Type: Gly Anticodon: GCC at 35-37 (46285560-46285558) Score: 22.48 * | * | * | * | * | * | * | Seq: AGTTGTTcTGGCCTAGTGGGtAGGGAGTTATGCTGCCAACCTAAAGAcAGGAGGTTCAAATCCACCAGCTGTTC Str: >>>.>>>....>>>........<<<..>>>.>.......<.<<<.....>>.>>.......<<.<<<<<.<<<. gi|408541802|gb|JH947130.1|.trna72 (45875754-45875679) Length: 76 bp Type: Ser Anticodon: ACT at 33-35 (45875722-45875720) Score: 21.43 Possible pseudogene: HMM Sc=23.32 Sec struct Sc=-1.89 * | * | * | * | * | * | * | * Seq: GCTCTCGTGGCTTAGTGGTAAGGTGTTGTGCTACTAACACAAAGGctCACAGTTCGAATccaCCTGTTGTTAtGTG Str: >>>..>>..>>>>.......<<<<.>>>>>.......<<<<<......>>>>...........<<<<<<..<.<<. gi|408541802|gb|JH947130.1|.trna73 (45326876-45326806) Length: 71 bp Type: Ser Anticodon: GCT at 35-37 (45326842-45326840) Score: 20.12 * | * | * | * | * | * | * | Seq: CCAGGGGTGATGCAATTAGTtAACATGTCTGGTTGCTAACCAGAAGAtTCAAGGTTCAAGTCCACCCAGAG Str: .>.>>>...>>>...........<<<.>>>>>.......<<<<<........>>.......<<.<<<.<.. gi|408541802|gb|JH947130.1|.trna74 (45289541-45289469) Length: 73 bp Type: Gly Anticodon: GCC at 33-35 (45289509-45289507) Score: 20.33 Possible pseudogene: HMM Sc=27.79 Sec struct Sc=-7.46 * | * | * | * | * | * | * | Seq: GCTCTGTTGGCTTAGTGGTAAGGAATTGTGCTGCCAATGCAAAGGtATGGGGTTCAAATCCaCCAGCTGCTCC Str: >..>.>>...>>>.......<<<..>>>>>.......<<<<<.....>>>>>.......<<.<<<<<.<..<. gi|408541802|gb|JH947130.1|.trna75 (44958800-44958731) Length: 70 bp Type: Gly Anticodon: GCC at 33-35 (44958768-44958766) Score: 20.46 Possible pseudogene: HMM Sc=23.41 Sec struct Sc=-2.95 * | * | * | * | * | * | * Seq: TCACTGGTAGCCTAGTGGTAAGGAGTTGCACTGCCAACCTGACGGCaTGTGGTTCGAATCCACCAGTTAC Str: >.>>>>>...>>>.......<<<..>>>...........<<<.......>>>.......<<<<<<<<.<. gi|408541802|gb|JH947130.1|.trna76 (44445352-44445282) Length: 71 bp Type: Phe Anticodon: GAA at 33-35 (44445320-44445318) Score: 22.09 Possible pseudogene: HMM Sc=33.55 Sec struct Sc=-11.46 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGAAATCCCAGAGGtATGCGGTTCAAATCCACTAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.....>..>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna77 (44436345-44436276) Length: 70 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 25.44 * | * | * | * | * | * | * Seq: GCAGTGATGAGTCAGTGGTAGAATTTCATCTTCTATGTTGGAGAGCTGGGTTCAATTCTCAGCCATTGCT Str: >>>>>>...>.>>.......<<.<.>>>.>......<.<<<....>>>>>.......<<<<<.<<<<<<. gi|408541802|gb|JH947130.1|.trna78 (44281169-44281099) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (44281137-44281135) Score: 20.94 * | * | * | * | * | * | * | Seq: ACAGTGGTGGTTCAACGACAGAATTCAAGCTATCCATGCTGGAGACCAGGGTTCGATTCCCAGCCAATAAT Str: ..>.>>>..>>>>.......<<<<.>.>>>.......<<<.<....>.>>>.......<<<.<<<<.<... gi|408541802|gb|JH947130.1|.trna79 (44135597-44135528) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (44135565-44135563) Score: 32.34 * | * | * | * | * | * | * Seq: CCTCTGGTGGCCTAGTGGCAGGAAGCTGCACTGCAATTGCAGAGGCaCGTGGTTCGAATCCACCAGGGAC Str: .>>>>>>....>>.......<<...>>>>>.......<<<<<.......>>>.......<<<<<<<<<.. gi|408541802|gb|JH947130.1|.trna80 (43472243-43472173) Length: 71 bp Type: Cys Anticodon: ACA at 33-35 (43472211-43472209) Score: 20.77 Possible pseudogene: HMM Sc=30.30 Sec struct Sc=-9.53 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGGAGCTGCACTACAATCCCAGAGGCgCACGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>...........<<<........>>.......<<.<<<<<.<<. gi|408541802|gb|JH947130.1|.trna81 (42311814-42311744) Length: 71 bp Type: Gly Anticodon: GCC at 35-37 (42311780-42311778) Score: 27.19 * | * | * | * | * | * | * | Seq: AACTCTGgTGGCCCAGTGGTtATGGTGTTGTGTTGCCACCCCAAAGGtAGGTGGTTTAAATCCACCAGCTG Str: >.>>......>>>..........<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<<<.<. gi|408541802|gb|JH947130.1|.trna82 (41698983-41698910) Length: 74 bp Type: Asp Anticodon: GTC at 33-35 (41698951-41698949) Score: 20.64 Possible pseudogene: HMM Sc=27.21 Sec struct Sc=-6.57 * | * | * | * | * | * | * | Seq: GTTCTGGTGGCCTAGTGGTAAGGAGTTGTGTTGTCAATGCAAAGGcACAAGGTTCAAATCCACaaGCTGCACCA Str: >.>.>>>...>>>.......<<<..>>>>>.......<<<<<.....>..>>.......<<....<<<<.<.<. gi|408541802|gb|JH947130.1|.trna83 (41167186-41167113) Length: 74 bp Type: Val Anticodon: GAC at 36-38 (41167151-41167149) Score: 24.10 Possible pseudogene: HMM Sc=7.77 Sec struct Sc=16.33 * | * | * | * | * | * | * | Seq: GGAACTCtagTGACTTAGTGGTAAAGAGTTGCATTGACAaCTGCAAGGCAAGTGGTTCAAATCCACAAGTTCCA Str: >>>>>>.......>>>.......<<<..>>>>>........<<<<<.....>>>>.......<<<<.<<<<<<. gi|408541802|gb|JH947130.1|.trna84 (40697548-40697478) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (40697516-40697514) Score: 22.37 Possible pseudogene: HMM Sc=36.68 Sec struct Sc=-14.31 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGTACGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<..>><<..>>.......<<.<<<<<.<<. gi|408541802|gb|JH947130.1|.trna85 (40582454-40582382) Length: 73 bp Type: Gly Anticodon: GCC at 33-35 (40582422-40582420) Score: 24.84 * | * | * | * | * | * | * | Seq: GAGCTGGTGGCTTAGTGGTAAGGAATGGCACTGCCAATACAAAGGtGTGTGGTTCGAATCGATcACCTGCTCC Str: >>>>.>>...>>>.......<<<..>.>.>.......<.<.<.....>>>.>.......<.<<.<<<.<<<<. gi|408541802|gb|JH947130.1|.trna86 (39449345-39449274) Length: 72 bp Type: Ser Anticodon: GCT at 32-34 (39449314-39449312) Score: 21.78 Possible pseudogene: HMM Sc=25.05 Sec struct Sc=-3.27 * | * | * | * | * | * | * | Seq: GTGTGGTGGCTTAGTGGTAAGGAGTTATGCTGCTAACCCAAAGGtAGGTAGTTCAAATCCACCaGCTGCTCC Str: >.>>>>...>>>.......<<<..>>..>.......<..<<.....>>>.>.......<.<<<..<<<<.<. gi|408541802|gb|JH947130.1|.trna87 (39165073-39165003) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (39165041-39165039) Score: 20.98 Possible pseudogene: HMM Sc=27.52 Sec struct Sc=-6.54 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTCTAGTGGCAAGAAGCTGCACTGCAATCTCAGAGGtACACGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>...........<<<........>>.......<<.<<<<<.<<. gi|408541802|gb|JH947130.1|.trna88 (38974810-38974740) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (38974778-38974776) Score: 22.14 Possible pseudogene: HMM Sc=30.20 Sec struct Sc=-8.06 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTCTAGTGGCAAGAAGCTGCACTGCAATCCCAGAGGtgCATGGTTCAAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna89 (38661614-38661544) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (38661582-38661580) Score: 81.44 * | * | * | * | * | * | * | Seq: GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTGCCATGCGGGAGGCCCGGGTTCGATTCCCGGCCCATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna90 (36417746-36417673) Length: 74 bp Type: Ser Anticodon: GCT at 35-37 (36417712-36417710) Score: 21.11 Possible pseudogene: HMM Sc=23.27 Sec struct Sc=-2.16 * | * | * | * | * | * | * | Seq: CTCTGATTAGTACAcATGGTcAAAGTATTTGGTTGCTAACCAGAAGAtTGGAAGTTCGAGTCTTCCTTAAGGTG Str: .>>>.>...>>.............<<.>>>>>.......<<<<<.....>>>>>.......<<<<<.<.<<<.. gi|408541802|gb|JH947130.1|.trna91 (35472641-35472568) Length: 74 bp Type: Tyr Anticodon: GTA at 33-35 (35472609-35472607) Score: 22.56 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGAAGCTGTGCTGTAATCCCAGAGGCATGCATGCAGTTCAAACCTCCCAGCTCC Str: >..>>>>....>>.......<<...>>>.>.......<.<<<..>>><<<..>.>>.......<<<<<<<..<. gi|408541802|gb|JH947130.1|.trna92 (34836361-34836292) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (34836329-34836327) Score: 24.98 Possible pseudogene: HMM Sc=30.24 Sec struct Sc=-5.26 * | * | * | * | * | * | * Seq: GCTCTGGTGGCTTAGTGGCAAGGAGCTGCACTGCAATGCCAGAGGtCTGCGGTTCAAATCCACCAGAATC Str: >.>>>>>...>>>.......<<<..>>>...........<<<.....>..>>.......<<<<<<<<.<. gi|408541802|gb|JH947130.1|.trna93 (32443021-32442951) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (32442989-32442987) Score: 24.84 Possible pseudogene: HMM Sc=25.75 Sec struct Sc=-0.91 * | * | * | * | * | * | * | Seq: GGAGCTCTGGTCTAGTGGCAAGATCCTGCACTGCAATCCCAGAGGtACGTGGTTCAAATCCACCAGATCCT Str: >>>.>>...>>>>.......<<<<.>>>...........<<<......>>>>.......<<<<.<<.<<<. gi|408541802|gb|JH947130.1|.trna94 (31299958-31299877) Length: 82 bp Type: Leu Anticodon: TAG at 35-37 (31299924-31299922) Score: 68.14 * | * | * | * | * | * | * | * | Seq: GGTAGCGTGGCCGAGTGGTctAAGGCGCTGGATTTAGGCTCCAGTCATTTCGATGGCGTGGGTTCGAATCCCACCGCTGCCA Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>..<<<<..>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna95 (25669868-25669798) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (25669836-25669834) Score: 20.06 Possible pseudogene: HMM Sc=34.43 Sec struct Sc=-14.37 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCAATCCCAGAGGcCCATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna96 (25133194-25133126) Length: 69 bp Type: Cys Anticodon: GCA at 33-35 (25133162-25133160) Score: 21.49 Possible pseudogene: HMM Sc=26.69 Sec struct Sc=-5.20 * | * | * | * | * | * | * Seq: ATATTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtTTGTGGTTCAAATCCACCAGATG Str: >>.>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna97 (24540648-24540576) Length: 73 bp Type: Phe Anticodon: AAA at 33-35 (24540616-24540614) Score: 20.41 Possible pseudogene: HMM Sc=35.53 Sec struct Sc=-15.12 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGACACTGCACTAAAAtcCTGAAGGTAtGTGGTTCGAATCCACcACCTGCTCT Str: >..>.>>..>.>>.......<<.<.>>.>>.........<<.<<....>>>>.......<<<<..<<.<..<. gi|408541802|gb|JH947130.1|.trna98 (23826845-23826775) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (23826813-23826811) Score: 23.21 Possible pseudogene: HMM Sc=35.76 Sec struct Sc=-12.55 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACACTGCACTGCAATCCCAGAGGtACGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna99 (23581020-23580949) Length: 72 bp Type: Ser Anticodon: GCT at 34-36 (23580987-23580985) Score: 20.03 Possible pseudogene: HMM Sc=26.36 Sec struct Sc=-6.33 * | * | * | * | * | * | * | Seq: GTCCTGGTAACATAATGGAtTAAGTGTTGGACTGCTAACCAAAAGGtTAGTGGTTCAAATCCATCAGTGACT Str: >>>.>.>..>>.>........<.<<.>>.>.........<.<<.....>.>>>.......<<<<<.<.<<<. gi|408541802|gb|JH947130.1|.trna100 (22349165-22349089) Length: 77 bp Type: Asp Anticodon: GTC at 36-38 (22349130-22349128) Score: 21.18 * | * | * | * | * | * | * | * Seq: GGAGCtctAGTGGCTTAGTGGTAAGGAATTATGCTGTCAACTCAAAGAtATGTGGTTCAAATCCACcaGCTGCTCCA Str: >>>>>...>>...>>>.......<<<..>>..>.......<..<<.....>>>>>.......<<<<..<<<<<<<<. gi|408541802|gb|JH947130.1|.trna101 (18195116-18195044) Length: 73 bp Type: Gly Anticodon: GCC at 34-36 (18195083-18195081) Score: 25.25 Possible pseudogene: HMM Sc=29.54 Sec struct Sc=-4.29 * | * | * | * | * | * | * | Seq: CGTAGGGTGACTTAGTGGTtAAGGAGTTGCACTGCCAATCCAAAGGcCGATGGTTAGAATCCACCAGGTACAT Str: .>>>......>>>........<<<..>>>.>.......<.<<<.....>.>>>.......<<<.<...<<<.. gi|408541802|gb|JH947130.1|.trna102 (16881204-16881132) Length: 73 bp Type: Gly Anticodon: GCC at 36-38 (16881169-16881167) Score: 23.07 * | * | * | * | * | * | * | Seq: GGAGCTCTggaGACTTAGTGGTAAGGAGCTGTGCTGCCAAACCAGAGGCAGTGGTTCAAATCCATCAGCTCCT Str: >>>>>>.......>>>.......<<<..>>>...........<<<....>.>>>.......<<<<.<<<<<<. gi|408541802|gb|JH947130.1|.trna103 (14961475-14961393) Length: 83 bp Type: Leu Anticodon: CAG at 35-37 (14961441-14961439) Score: 32.77 Possible pseudogene: HMM Sc=30.85 Sec struct Sc=1.92 * | * | * | * | * | * | * | * | Seq: GTCAGGATGGCTGAAGGGTctAAGGCGCTGCACTCAGGTCACAGCCTCCTCTGGAGGCATGAGTTCAAGTTCCACTTGTGACA Str: >>>>.>>..>>>...........<<<.>>>...........<<<.>>>>...<<<<...>>.>.......<.<<.<<.<<<<. gi|408541802|gb|JH947130.1|.trna104 (14390905-14390834) Length: 72 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 26.78 * | * | * | * | * | * | * | Seq: GCGCTGGTGGCCTAGTGGCAAGGAGCTGCAaCTACAATTGCAGAGGCGcATGGTTCAAATCCACCAGATGCT Str: >>>.>.>...>>>.......<<<..>>>>>........<<<<<....>..>>>.......<<<<<.<.<<<. gi|408541802|gb|JH947130.1|.trna105 (14310532-14310457) Length: 76 bp Type: Ala Anticodon: AGC at 35-37 (14310498-14310496) Score: 39.14 * | * | * | * | * | * | * | * Seq: GGAGCTTTggGGCCCAGTGGTAAGGAGTTGGGCCAGCAACCCAAAGGtATGTGGTTCAAATCCACCAGctGCTCCA Str: >>>>>>>.....>>.........<<..>>>>>.......<<<<<......>>>>.......<<<<.<<..<<<<<. gi|408541802|gb|JH947130.1|.trna106 (14302572-14302502) Length: 71 bp Type: Thr Anticodon: GGT at 35-37 (14302538-14302536) Score: 21.06 * | * | * | * | * | * | * | Seq: GACCTCTatTGGTGCAGTGGTtAAATTTTTGGCTGGTAACCAGAAGGtCAGCAGTTTGAATCTGCCGGCCG Str: >.>>.......>>...........<<.>>>>>.......<<<<<......>>>>.......<<<<.<<.<. gi|408541802|gb|JH947130.1|.trna107 (13926612-13926542) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (13926580-13926578) Score: 20.48 Possible pseudogene: HMM Sc=20.15 Sec struct Sc=0.33 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTATTGGTAAGAAGCTGCACTGCAGTTGCAGAGGtATGTGGTTCAAAGCCACCAGGTGCT Str: >>.>>.>....>>.......<<...>>>>>.......<<<<<......>>>>.......<<<<<.<<.<<. gi|408541802|gb|JH947130.1|.trna108 (13407654-13407585) Length: 70 bp Type: Phe Anticodon: GAA at 34-36 (13407621-13407619) Score: 20.01 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCCTAGTGGTAAGAAGCTGGACTGAAATTCCGGAGACaAGTGGTTCGAGTTCACCAGCTG Str: >>>>..>>....>>.......<<...>>>>>.......<<<<<.......>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna109 (12549656-12549584) Length: 73 bp Type: Asn Anticodon: GTT at 33-35 (12549624-12549622) Score: 21.66 Possible pseudogene: HMM Sc=28.34 Sec struct Sc=-6.68 * | * | * | * | * | * | * | Seq: GCTCTGGTAGCTTAGTGGTAAACGGTTGCACTGTTAACCCAAAGGCTcATGGTTTGAATCCACcATTGGAGTA Str: >>>>>>>....>>.......<<...>>>...........<<<....>..>>>.......<<<..<<<<<<<<. gi|408541802|gb|JH947130.1|.trna110 (12474846-12474778) Length: 69 bp Type: Gly Anticodon: TCC at 33-35 (12474814-12474812) Score: 20.98 * | * | * | * | * | * | * Seq: AGCTCAGTGGCTTAGTGGAAAGGAAGTGTGCTTCCAACACAAAAGtGCATGGTTCAAATCCATGGGCTG Str: >>>>......>>>.......<<<...>>>>.......<<<<......>>>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna111 (12393127-12393056) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (12393095-12393093) Score: 21.28 Possible pseudogene: HMM Sc=27.77 Sec struct Sc=-6.49 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCAATCACAGAGAtAAGTGGTTCAAATCCACTCTGCTGGA Str: .>..>>>....>>.......<<...>>>...........<<<.....>>>>>.......<<<<<<<<..<.. gi|408541802|gb|JH947130.1|.trna112 (10979858-10979789) Length: 70 bp Type: His Anticodon: GTG at 33-35 (10979826-10979824) Score: 23.18 Possible pseudogene: HMM Sc=7.99 Sec struct Sc=15.19 * | * | * | * | * | * | * Seq: GCTCTGGTGGCTTAGTTaTAAAGAGCTGTGCTGTGAACTCAAAGGCaTGTGGTTCGAATCCACCAGAGTT Str: >>>>>>>...>>>.......<<<...>>.>.......<.<<........>>>.......<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna113 (10976058-10975989) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (10976026-10976024) Score: 20.38 Possible pseudogene: HMM Sc=23.94 Sec struct Sc=-3.56 * | * | * | * | * | * | * Seq: GCTCTGGTAGCCTAGTGGCAAGAAGCTGCACTGCAATCCCAGAGGtgTGTGGTTCAAATCCACCAGATTA Str: >.>>>>>....>>.......<<...>>>...........<<<.......>>>.......<<<<<<<<.<. gi|408541802|gb|JH947130.1|.trna114 (10836977-10836904) Length: 74 bp Type: Gly Anticodon: GCC at 36-38 (10836942-10836940) Score: 30.45 * | * | * | * | * | * | * | Seq: GCAGTCTTtggAGCTTAGTGGTAAGGTGTTGTGCTGCCAACTCAAAGGtTCGAGGTTCAAATCCACTAGCTGCC Str: >>>>.>>.....>>>>.......<<<<.>>>.>.......<.<<<......>.>>.......<<.<.<<<<<<. gi|408541802|gb|JH947130.1|.trna115 (9800986-9800916) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (9800954-9800952) Score: 24.93 Possible pseudogene: HMM Sc=37.48 Sec struct Sc=-12.55 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtACGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna116 (9548443-9548373) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (9548411-9548409) Score: 22.37 Possible pseudogene: HMM Sc=36.68 Sec struct Sc=-14.31 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGTACGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<..>><<..>>.......<<.<<<<<.<<. gi|408541802|gb|JH947130.1|.trna117 (9423039-9422966) Length: 74 bp Type: Cys Anticodon: GCA at 33-35 (9423007-9423005) Score: 28.78 Possible pseudogene: HMM Sc=33.14 Sec struct Sc=-4.36 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCACTCCCAGAGGtACGTGGTTCAAATCCACcaGCTGGAGAA Str: .>>>>>>..>.>>.......<<.<.>>>...........<<<.....>>>>>.......<<<<..<<<<<<<.. gi|408541802|gb|JH947130.1|.trna118 (8875407-8875338) Length: 70 bp Type: Gly Anticodon: GCC at 33-35 (8875375-8875373) Score: 31.97 * | * | * | * | * | * | * Seq: GGTCTGATGGCCTAGTGGTAAGGAGTTGTGCTGCCAACCCAAAGtCaTGTGGTTCAAATCCATCAGTTTC Str: >>.>>>>...>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna119 (8735842-8735772) Length: 71 bp Type: Arg Anticodon: TCT at 33-35 (8735810-8735808) Score: 27.81 Possible pseudogene: HMM Sc=39.84 Sec struct Sc=-12.03 * | * | * | * | * | * | * | Seq: GAGTAAGTGGTTCAGTGGTAGAATTCTTGCCTTCTGTGTGAGAGACCTCAGTTCAATTCCTGGTCAGTGCA Str: >.>>..>..>>>>.......<<<<.>>>>>.......<<<<<....>>..>.......<..<<<..<<.<. gi|408541802|gb|JH947130.1|.trna120 (7454150-7454080) Length: 71 bp Type: Arg Anticodon: TCT at 33-35 (7454118-7454116) Score: 44.88 * | * | * | * | * | * | * | Seq: ACATTGCTAGGTCAATGGTAGACTATCCACCTTCTGTGTGGAAGATCTGGGTTTGATTCCCAGCCAATGTA Str: >>>>>>...>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<.<<<<<<. gi|408541802|gb|JH947130.1|.trna121 (7433079-7433009) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (7433047-7433045) Score: 35.80 Possible pseudogene: HMM Sc=39.63 Sec struct Sc=-3.83 * | * | * | * | * | * | * | Seq: GCAGCGGTGGCTCAGCGGTAGGATTCTCACCTGCCACGGGAACGATCTGGGTTCAATTCCCAGCTGATGAA Str: .>>.>>>..>.>>.......<<.<..>>.>.......<.<<.....>>>>>.......<<<<<<<<.<<.. gi|408541802|gb|JH947130.1|.trna122 (7375097-7375028) Length: 70 bp Type: Tyr Anticodon: GTA at 33-35 (7375065-7375063) Score: 23.10 Possible pseudogene: HMM Sc=26.37 Sec struct Sc=-3.27 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTGGTAGGAAACTGTGCTGTAATCCCAAAGGCaCATGGTTCAAATCCACTAGCTCA Str: >..>>>>....>>.......<<....>>.>.......<.<<........>>>.......<<<<<<<..<. gi|408541802|gb|JH947130.1|.trna123 (7210123-7210053) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (7210091-7210089) Score: 22.87 Possible pseudogene: HMM Sc=33.29 Sec struct Sc=-10.42 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtATGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.....>..>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna124 (5446239-5446165) Length: 75 bp Type: Arg Anticodon: TCT at 34-36 (5446206-5446204) Score: 21.01 Possible pseudogene: HMM Sc=29.89 Sec struct Sc=-8.88 * | * | * | * | * | * | * | Seq: GACTTGGTGGTACAGTGGTtAAAACACTCGGCTTCTAACTGCAGGGtTTGTGGTTCAAACCCACcaGCCACTCCA Str: >...>>>..>>............<<...>>>.......<<<.......>>>>>.......<<<<..<<<<...<. gi|408541802|gb|JH947130.1|.trna125 (5438908-5438838) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (5438876-5438874) Score: 26.33 Possible pseudogene: HMM Sc=26.73 Sec struct Sc=-0.40 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCAATTGCAGAGAtGTGAGGTTCGAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>>>.......<<<<<.....>..>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna126 (4879012-4878894) Length: 119 bp Type: Cys Anticodon: ACA at 34-36 (4878979-4878977) Score: 21.62 Possible intron: 38-84 (4878975-4878929) Possible pseudogene: HMM Sc=21.96 Sec struct Sc=-0.34 * | * | * | * | * | * | * | * | * | * | * | * Seq: GCTCTGGTGGTCTAGTGGGtAGGGAGTTGGACTACAGcacatgcttcgcggggaaagactggcaatttcctcccgattatcagcTTCCAGAAAAGTCGGTTCGAACCCGACCCAGTTGA Str: ...>>>>...>>>........<<<..>>>>>......................................................<<<<<....>>>>>.......<<<<<<<<<.... gi|408541802|gb|JH947130.1|.trna127 (4387137-4387067) Length: 71 bp Type: Tyr Anticodon: GTA at 33-35 (4387105-4387103) Score: 20.40 Possible pseudogene: HMM Sc=30.57 Sec struct Sc=-10.17 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGTAATCCCAGAGGCaCATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna128 (2140399-2140329) Length: 71 bp Type: Gly Anticodon: GCC at 35-37 (2140365-2140363) Score: 23.26 * | * | * | * | * | * | * | Seq: AGCTcTGGTGGCCTACTGGTtAAGGAGTTGAACTGCCAATCCGAAGGCaCATGGTTCAAATCCACCAGCTG Str: >>>>..>>...>>>........<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna129 (1522657-1522587) Length: 71 bp Type: Arg Anticodon: TCT at 33-35 (1522625-1522623) Score: 31.81 Possible pseudogene: HMM Sc=32.84 Sec struct Sc=-1.03 * | * | * | * | * | * | * | Seq: GTAGTGGAGGTTCAGTGGTAGAATTCTTGCCTTCTGTGTGGGAGACCTGGGTTCGATTTTCAGCTGATGCG Str: >>>.>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<.<<<. gi|408541802|gb|JH947130.1|.trna130 (1478082-1478011) Length: 72 bp Type: Cys Anticodon: ACA at 34-36 (1478049-1478047) Score: 20.91 Possible pseudogene: HMM Sc=20.28 Sec struct Sc=0.63 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGGAGCTGcAACTACAAtCTCAGAGGCgCATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>..>........<<<<.......>>>.......<<<<<<<<.<<. gi|408541802|gb|JH947130.1|.trna131 (1120235-1120164) Length: 72 bp Type: SeC Anticodon: TCA at 34-36 (1120202-1120200) Score: 28.90 * | * | * | * | * | * | * | Seq: GCTTTTATGTCACAGTGGTtAAAGAGTTCCATTTCAAACCAAAAGGtCAGTGGTTCAAATCCACTAGCAGCT Str: >>>.>>>..>>............<<.>>.............<<......>>>>.......<<<<<<<.<<<. gi|408541802|gb|JH947130.1|.trna132 (1039543-1039473) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (1039511-1039509) Score: 81.62 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna133 (1038625-1038555) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (1038593-1038591) Score: 81.62 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna134 (636020-635950) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (635988-635986) Score: 81.62 * | * | * | * | * | * | * | Seq: GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGCCACGCGGGAGGCCCGGGTTCGATTCCCGGCCAATGCA Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna135 (552250-552181) Length: 70 bp Type: Ser Anticodon: GCT at 33-35 (552218-552216) Score: 23.37 Possible pseudogene: HMM Sc=31.18 Sec struct Sc=-7.81 * | * | * | * | * | * | * Seq: GCCTTGGTGGTGCAGTGGTtAAATGCTTGGTTGCTAATCCAGAGGtCAGTGGTTTGAACCTACCAGGGTC Str: >>>>>>>..>>...........<<.>>.>>.......<<.<<.......>>>.......<<<<<<<<<<. gi|408541802|gb|JH947130.1|.trna136 (277955-277886) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (277923-277921) Score: 20.64 Possible pseudogene: HMM Sc=30.68 Sec struct Sc=-10.04 * | * | * | * | * | * | * Seq: GTTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtACACGGTTCAAATCCACCAGATTC Str: >.>>>>>..>.>>.......<<.<.>>>...........<<<........>>.......<<.<<<<<.<. gi|408541801|gb|JH947131.1|.trna1 (2779538-2779619) Length: 82 bp Type: Ser Anticodon: GCT at 34-36 (2779571-2779573) Score: 25.09 * | * | * | * | * | * | * | * | Seq: CCCTGGTGACCCTAGTGGGtAGGGAGTTGAGCTGCTAACCCAAACGTGTGTGTCTCTGGTGGTTCAAATCCACCACCAGCAG Str: ..>>>>>...>>>........<<<..>>>.>.......<.<<<..>.......<...>>>>>.......<<<<<<<<<<... gi|408541801|gb|JH947131.1|.trna2 (3023708-3023779) Length: 72 bp Type: Glu Anticodon: CTC at 34-36 (3023741-3023743) Score: 76.61 * | * | * | * | * | * | * | Seq: TCCCTGGTGGTCTAGTGGTtAGGATTCGGCGCTCTCACCGCCGCGGCCCGGGTTCGATTCCCGGTCAGGGAA Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna3 (4280881-4280952) Length: 72 bp Type: Gln Anticodon: TTG at 34-36 (4280914-4280916) Score: 25.09 Possible pseudogene: HMM Sc=26.38 Sec struct Sc=-1.29 * | * | * | * | * | * | * | Seq: GAACCCATGGTGCGATGGTtAGCACCCTGGAATTTGAATCCAGCGATCTGAGTTCAAATCTTGGGGGAGACT Str: >...>>...>>>>........<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<.<<...<. gi|408541801|gb|JH947131.1|.trna4 (5636371-5636442) Length: 72 bp Type: Tyr Anticodon: GTA at 33-35 (5636403-5636405) Score: 23.80 Possible pseudogene: HMM Sc=34.49 Sec struct Sc=-10.69 * | * | * | * | * | * | * | Seq: GCCCTAATGGCTTAGTGGTAAGGAGTTGCATTGTAAATCCAAAGGCATGcaAGTTCGAATCCATGGGAGGAA Str: .>>.>.....>>>.......<<<..>>>.>.......<.<<<....>>>...>.......<<<<..<.<<.. gi|408541801|gb|JH947131.1|.trna5 (5973071-5973144) Length: 74 bp Type: Pro Anticodon: AGG at 34-36 (5973104-5973106) Score: 23.50 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGAGGGtAAGGTGTTGTGCTAGGAACCCAAAGACAAATGaTTCAAATcCTTTACCTGCTCA Str: >..>.>>..>>>>........<<<<.>>>.>.......<.<<<.....>>.>.........<.<<.<<.<..<. gi|408541801|gb|JH947131.1|.trna6 (8691470-8691542) Length: 73 bp Type: Cys Anticodon: ACA at 34-36 (8691503-8691505) Score: 22.87 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGGAGCTGcAACTACAAATCcCAGAGGCgCATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>..>.......<..<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna7 (8802081-8802151) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (8802113-8802115) Score: 27.03 Possible pseudogene: HMM Sc=29.82 Sec struct Sc=-2.79 * | * | * | * | * | * | * | Seq: GCTCTCGTGGCCTAGTGGTAAGAAGTTGGGTTGCAAACCCAAAGGCATGtAGTTCGAATCCACCAGCTGCT Str: >>..>.>....>>.......<<...>>>>>.......<<<<<.....>>..>.......<<<.<.<..<<. gi|408541801|gb|JH947131.1|.trna8 (11730610-11730679) Length: 70 bp Type: Cys Anticodon: ACA at 33-35 (11730642-11730644) Score: 24.31 Possible pseudogene: HMM Sc=23.81 Sec struct Sc=0.50 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTCGCAAGATGCTGCACTACAATTCCAGAGGtATGTGGTTCAAATCCACCAGAGGC Str: .>>>>>>..>.>>.......<<.<.>>>.>.......<.<<<.......>>>.......<<<<<<<<<.. gi|408541801|gb|JH947131.1|.trna9 (11797194-11797265) Length: 72 bp Type: Cys Anticodon: GCA at 33-35 (11797226-11797228) Score: 23.37 Possible pseudogene: HMM Sc=19.48 Sec struct Sc=3.89 * | * | * | * | * | * | * | Seq: TGTTGTTTGTCCTAGTGGTAAGAAGCTGTCCTGCAATCCCAAAGGcATGTGGTTCGAATCCACAAGCAGCTC Str: .>>>>>>..>.>>.......<<.<..>>...........<<......>>>>>.......<<<<<<<<<<<.. gi|408541801|gb|JH947131.1|.trna10 (12780414-12780484) Length: 71 bp Type: Cys Anticodon: ACA at 33-35 (12780446-12780448) Score: 20.37 Possible pseudogene: HMM Sc=34.68 Sec struct Sc=-14.31 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACACTGCACTACAATCCCAGAGGTACGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<..>><<..>>.......<<.<<<<<.<<. gi|408541801|gb|JH947131.1|.trna11 (12885169-12885239) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (12885201-12885203) Score: 21.48 Possible pseudogene: HMM Sc=31.90 Sec struct Sc=-10.42 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAGTCCCAGAGGtATGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.....>..>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna12 (12886314-12886386) Length: 73 bp Type: Ala Anticodon: AGC at 33-35 (12886346-12886348) Score: 26.56 * | * | * | * | * | * | * | Seq: GAACTGGTGGCCTGGTGGTAAGGAGTTGTGCTAGCAACTCAAAGGcATATGGTTCAAATCCACcATCTGTTCT Str: >>>>.>>...>>>.......<<<..>>>.>.......<.<<<.....>.>>>.......<<<..<<<.<<<<. gi|408541801|gb|JH947131.1|.trna13 (13618060-13618130) Length: 71 bp Type: Asp Anticodon: GTC at 35-37 (13618094-13618096) Score: 20.29 Possible pseudogene: HMM Sc=21.78 Sec struct Sc=-1.49 * | * | * | * | * | * | * | Seq: GGCTCTGgTGGCCTAGTAGGTAAGGTGTTGCACTGTCAACCCAAAGGgAGCTGGTTCAAATCTATCAGCTA Str: >>>>......>>>>........<<<<.>>>...........<<<.....>.>>>.......<<<.<<<<<. gi|408541801|gb|JH947131.1|.trna14 (14429079-14429152) Length: 74 bp Type: Ser Anticodon: GCT at 34-36 (14429112-14429114) Score: 21.64 Possible pseudogene: HMM Sc=27.92 Sec struct Sc=-6.28 * | * | * | * | * | * | * | Seq: GCTTTACTAGTGTAATGGTtAATACGCTGGGCTGCTAACTAAAAGGtCAGTGGTTCAAATTCACcAGTGGCTCC Str: >..>>>>..>>>>........<<<<..>.>>.......<<.<.......>>>>.......<<<<..<<<<..<. gi|408541801|gb|JH947131.1|.trna15 (14429221-14429292) Length: 72 bp Type: Asp Anticodon: ATC at 33-35 (14429253-14429255) Score: 25.84 Possible pseudogene: HMM Sc=24.00 Sec struct Sc=1.84 * | * | * | * | * | * | * | Seq: GCTCTGGTGACTTAGTGGTAAAGAGTTGAGCCATCAATGCAAAGGtAAGTGGTTCAAATCCACCCTCTATTC Str: >.>..>>...>>>.......<<<..>>>.>.......<.<<<......>>>>.......<<<<.<<..<.<. gi|408541801|gb|JH947131.1|.trna16 (14487632-14487705) Length: 74 bp Type: Ser Anticodon: GCT at 33-35 (14487664-14487666) Score: 27.96 Possible pseudogene: HMM Sc=33.33 Sec struct Sc=-5.37 * | * | * | * | * | * | * | Seq: GTGTTGGTGGCCCAGTGGTAAGGAATTGTGCTGCTAACCCAAAGGcTCATGGTTCGAATCtaCCTGCTGCTCCA Str: >.>.>>>...>>.........<<..>>>.>.......<.<<<.....>>.>>.......<..<.<<<<<.<.<. gi|408541801|gb|JH947131.1|.trna17 (15527066-15527135) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (15527099-15527101) Score: 30.48 * | * | * | * | * | * | * Seq: GGCTCTGgTGGTTTAGTGGTAAGACATTGCACTGCCAATGCAAGGGtATGTGGTTTGAATCCACTAGCTG Str: >>>>......>>>>.......<<<<.>>>>>.......<<<<<......>>>>.......<<<<.<<<<. gi|408541801|gb|JH947131.1|.trna18 (15706838-15706910) Length: 73 bp Type: SeC Anticodon: TCA at 33-35 (15706870-15706872) Score: 27.25 * | * | * | * | * | * | * | Seq: GCTTTGATGTCTTAGTGGTAAGGGATTGTGCTTCAAACTCAAAGGCATGtGGTTCAAATCCaCAGGCAGCTCA Str: >..>>>...>>>>.......<<<<.>>>.>.......<.<<<.....>>.>>.......<<.<<..<<<..<. gi|408541801|gb|JH947131.1|.trna19 (16127984-16128051) Length: 68 bp Type: Asn Anticodon: GTT at 29-31 (16128012-16128014) Score: 20.07 * | * | * | * | * | * | * Seq: TGTGGTATAGTACATTGTACGTTGGGCTGTTAAATGAAAGGtCAGTGGTTCAATTCCATTAGCCACTC Str: .>>>>>...>>>>...<<<<.>>.>.........<.<<.....>>>>>.......<<<<<.<<<<<.. gi|408541801|gb|JH947131.1|.trna20 (16190304-16190373) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (16190337-16190339) Score: 26.33 * | * | * | * | * | * | * Seq: AGCcATGGTGGCTTAGTGGTAAAGTATTGCACTGCCAATGTAAATATAtATGGTTCGACTCCACCAGCTG Str: >>>..>>>..>>>>.......<<<<.>>>>>.......<<<<<.......>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna21 (17098564-17098634) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (17098596-17098598) Score: 20.81 Possible pseudogene: HMM Sc=33.44 Sec struct Sc=-12.63 * | * | * | * | * | * | * | Seq: GCCTTGGTGGCCTAGTGGCAAGAAGCTGTGCTGCAATTCCAGAGGtACGTGGTTCGAATCCACCAGATGCT Str: >>.>>.>....>>.......<<...>>>.>.......<.<<<......>>>>.......<<<<<.<<.<<. gi|408541801|gb|JH947131.1|.trna22 (23959181-23959251) Length: 71 bp Type: Tyr Anticodon: GTA at 33-35 (23959213-23959215) Score: 24.32 Possible pseudogene: HMM Sc=33.34 Sec struct Sc=-9.02 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCATTGTAATTCCAGAGGtgCGTGGTTCGAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>.>.......<.<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna23 (24217893-24217964) Length: 72 bp Type: Tyr Anticodon: ATA at 33-35 (24217925-24217927) Score: 26.12 Possible pseudogene: HMM Sc=33.02 Sec struct Sc=-6.90 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTATAATTCCAGAGGTGTGcAGTTCAAATCCACCTAGAtGCT Str: >>>>>>>....>>.......<<...>>>.>.......<.<<<....>>>..>.......<<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna24 (24770723-24770793) Length: 71 bp Type: Cys Anticodon: ACA at 33-35 (24770755-24770757) Score: 22.38 Possible pseudogene: HMM Sc=22.95 Sec struct Sc=-0.57 * | * | * | * | * | * | * | Seq: GCTGTGGTGGAACAGTGGTtAAGTATTCGGCTACAATCCGAAAGGtCAGCAGTTCAAACCTACCAGCAACT Str: >.>>>.>..>.............<.>>>>>.......<<<<<......>.>>.......<<.<<.<<<.<. gi|408541801|gb|JH947131.1|.trna25 (26263628-26263698) Length: 71 bp Type: Tyr Anticodon: ATA at 33-35 (26263660-26263662) Score: 30.47 Possible pseudogene: HMM Sc=34.36 Sec struct Sc=-3.89 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGGTGCTGCACTATAATCCCAGAGGtATGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>>>>.......<<<<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna26 (27703244-27703313) Length: 70 bp Type: Arg Anticodon: GCG at 34-36 (27703277-27703279) Score: 27.92 * | * | * | * | * | * | * Seq: AGCTTTGgTGGCTTAGTGGTAAGGAATTGCACTGCGAGTGCAAAGGtAAGTGGTTCAAATCCACTGGCTG Str: >>>>.......>>>.......<<<..>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna27 (27708654-27708729) Length: 76 bp Type: Gly Anticodon: GCC at 33-35 (27708686-27708688) Score: 21.14 Possible pseudogene: HMM Sc=9.09 Sec struct Sc=12.05 * | * | * | * | * | * | * | * Seq: GCTTTGGTGGCCTAGTGGTGAGGAGTTGTGCTGCCAACCCAAGGGCACAaGGTTTGAATCCacTGTCTGctGAGCA Str: >>>>>>>...>>>.......<<<..>>>.>.......<.<<<....>>>.>>.......<<..<<<<<<..<<<<. gi|408541801|gb|JH947131.1|.trna28 (27788824-27788893) Length: 70 bp Type: Tyr Anticodon: GTA at 33-35 (27788856-27788858) Score: 26.51 Possible pseudogene: HMM Sc=29.53 Sec struct Sc=-3.02 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTGGTATGAAGCTGCGCTGTAGTCCCAGAGGCaCGTGGTTCGAATCCACCAGCTTC Str: >..>>>>....>.........<...>>>.>.......<.<<<.......>>>.......<<<<<<<..<. gi|408541801|gb|JH947131.1|.trna29 (28224968-28225037) Length: 70 bp Type: Ser Anticodon: GCT at 34-36 (28225001-28225003) Score: 20.14 Possible pseudogene: HMM Sc=17.34 Sec struct Sc=2.80 * | * | * | * | * | * | * Seq: AGCTcTGGTAGCCTAGTGGTAAGGAGCTGCACTGCTGACACAGAGGCaCGGGGTTCGAATCCACCAGCTG Str: >>>>..>>...>>>.......<<<..>>>...........<<<........>>.......<<.<<<<<<. gi|408541801|gb|JH947131.1|.trna30 (28359888-28359960) Length: 73 bp Type: Val Anticodon: GAC at 36-38 (28359923-28359925) Score: 22.42 * | * | * | * | * | * | * | Seq: GTGTTGGcgTGGCCTAGTGGCtAGGGAGCTGCGCTGACAACCCGAAGGCaGATGGTTCGAATCCACTAACACT Str: >>>>>>>.....>>>........<<<...>>.>.......<.<<........>>>.......<<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna31 (29798523-29798591) Length: 69 bp Type: Arg Anticodon: TCT at 33-35 (29798555-29798557) Score: 27.36 * | * | * | * | * | * | * Seq: TTGGTGTTGGCTCAGGGGTATAATTCCAGCTTTCTGTGCAGGAGATCTAAGTTCGATTCTTGGACCAAG Str: >>>..>>..>.>.........<.<.>>.>>.......<<.<<....>>>>>.......<<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna32 (31130564-31130633) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (31130597-31130599) Score: 20.13 Possible pseudogene: HMM Sc=9.19 Sec struct Sc=10.94 * | * | * | * | * | * | * Seq: AGtTCTGGTGGCTTAATGGTAAGGGTCTGGGCTGCCAACCCAGAGACaCATGGTTCACATCCACCAGCTG Str: >>..>>>>...>>>.......<<<..>>>>>.......<<<<<.......>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna33 (32088597-32088668) Length: 72 bp Type: Arg Anticodon: TCT at 34-36 (32088630-32088632) Score: 32.87 Possible pseudogene: HMM Sc=31.56 Sec struct Sc=1.31 * | * | * | * | * | * | * | Seq: ACAGTGGTGGTTCAGGGGGtAGAATTTTTATCTTCTGTGCAGGAGACCAGGGTTCGATTCCTAGCCGATGTG Str: >>>.>>>..>>>>........<<<<.>>>.>.......<.<<<....>.>>>.......<<<.<<<<.<<<. gi|408541801|gb|JH947131.1|.trna34 (32683900-32683970) Length: 71 bp Type: Arg Anticodon: TCT at 33-35 (32683932-32683934) Score: 38.29 * | * | * | * | * | * | * | Seq: GCAGTGGTGGTTCTGTGGCAGGATTCCCCCCTTCTGCGTGGGAGACCCAGGTTCGATTTCCGGCCAGTGCC Str: >>>.>>>..>>>>.......<<<<.>>>.>.......<.<<<....>>.>>.......<<.<<<<<.<<<. gi|408541801|gb|JH947131.1|.trna35 (32746017-32746088) Length: 72 bp Type: Asn Anticodon: GTT at 33-35 (32746049-32746051) Score: 35.74 Possible pseudogene: HMM Sc=34.52 Sec struct Sc=1.22 * | * | * | * | * | * | * | Seq: GCTCTGGAGGCCTAATGGTAAGGCATTGTGCTGTTAACCCAAAGGcAGACAGTTCGAATCCACCTCAGGGCA Str: >>>>>>>..>>>>.......<<<<.>>>.>.......<.<<<.....>...>.......<...<<<<<<<<. gi|408541801|gb|JH947131.1|.trna36 (33027623-33027693) Length: 71 bp Type: Cys Anticodon: ACA at 33-35 (33027655-33027657) Score: 22.99 Possible pseudogene: HMM Sc=35.53 Sec struct Sc=-12.54 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTACAATCCCAGAGGtACGTGGTTCAAGTCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna37 (33410753-33410825) Length: 73 bp Type: Gly Anticodon: GCC at 35-37 (33410787-33410789) Score: 27.84 Possible pseudogene: HMM Sc=29.01 Sec struct Sc=-1.17 * | * | * | * | * | * | * | Seq: GCTCTGGTAGCTCAGTGGGTtAAGGCATTGTGCTGCCAACCCAAAGGAaGGTGGTTCAAGTCCACCTGCTGCT Str: >>..>>>..>>>...........<<<.>>>.>.......<.<<<......>>>>.......<<<<<<<..<<. gi|408541801|gb|JH947131.1|.trna38 (34643552-34643622) Length: 71 bp Type: Ser Anticodon: ACT at 33-35 (34643584-34643586) Score: 26.50 * | * | * | * | * | * | * | Seq: GTTCTGGTGGCTGAGTGGTAAAGAGTTGTGCTACTAACACAAAAGggaGGTGGTTCAAATCCACCAGCATC Str: >>.>>>>...>>.........<<..>>>>>.......<<<<<........>>>.......<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna39 (34990901-34990971) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (34990933-34990935) Score: 23.24 Possible pseudogene: HMM Sc=31.52 Sec struct Sc=-8.28 * | * | * | * | * | * | * | Seq: GCACTGGTGGTTCAGGGGCAGGATACTCACCTTCCATGCTGGAGACCCAGGTTTGAATCCGAGTCAATGTA Str: >>>.>>>..>>>>.......<<<<.>>..>.......<..<<....>..>>.......<<..<<<<.<<<. gi|408541801|gb|JH947131.1|.trna40 (35065419-35065489) Length: 71 bp Type: Glu Anticodon: TTC at 33-35 (35065451-35065453) Score: 38.51 * | * | * | * | * | * | * | Seq: GCATCGGTGGTTCAGTGGAAGAGTTCTTGCCTTTCATGACAGAAGCCTGGATTCCAGTCCCAGCCGATACA Str: >.>>>>>..>>>>.......<<<<.>>..>.......<..<<....>>>>.........<<<<<<<<<.<. gi|408541801|gb|JH947131.1|.trna41 (36292400-36292473) Length: 74 bp Type: Ile Anticodon: AAT at 35-37 (36292434-36292436) Score: 80.66 * | * | * | * | * | * | * | Seq: GGCCGGTTAGCTCAGTTGGTtAGAGCGTGGTGCTAATAACGCCAAGGtCGCGGGTTCGATCCCCGTACGGGCCA Str: >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<. gi|408541801|gb|JH947131.1|.trna42 (36976197-36976271) Length: 75 bp Type: Gly Anticodon: GCC at 35-37 (36976231-36976233) Score: 22.20 Possible pseudogene: HMM Sc=27.78 Sec struct Sc=-5.58 * | * | * | * | * | * | * | Seq: GAGCtcTGGTAGCCTAATGGTAAAGTGCTTTACTGCCAATGTGAAGGtACGTGGTTCGAATCCACcaGCTGCTCA Str: >>>>...>>..>>.>.......<.<<..>.>>.......<<.<......>>>>>.......<<<<..<<<<<<<. gi|408541801|gb|JH947131.1|.trna43 (37962330-37962400) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (37962362-37962364) Score: 26.70 Possible pseudogene: HMM Sc=34.37 Sec struct Sc=-7.67 * | * | * | * | * | * | * | Seq: GCTGTGGTGGTTCAGTGGCAGAAGTCCCGCCTGCCAGACAGGAGGCCTGGGTTCGGTTCCCAGTCCGTGTA Str: >>...>>...>>>.......<<<..>>.>.........<.<<....>>>>>.......<<<<<<<...<<. gi|408541801|gb|JH947131.1|.trna44 (38839399-38839468) Length: 70 bp Type: Gly Anticodon: GCC at 33-35 (38839431-38839433) Score: 28.83 Possible pseudogene: HMM Sc=24.63 Sec struct Sc=4.20 * | * | * | * | * | * | * Seq: GCTCTGGTAGCCTAGTGGTAAGGAATTGTGCTGCCAACCCAAAGGCaTCTGGTTCAAATCCACCAGTTTC Str: >..>>>>...>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<..<. gi|408541801|gb|JH947131.1|.trna45 (39051007-39051077) Length: 71 bp Type: Arg Anticodon: GCG at 35-37 (39051041-39051043) Score: 22.10 * | * | * | * | * | * | * | Seq: AGtCTTGGTAGCATAGTGGTtAAAGTGTTTGGCTGCGCACTAAAAGGTGtCTGGTTCGAGCCCACCAGCTG Str: >>..>>>>..>>.>........<.<<.>>>>>.......<<<<<.......>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna46 (39436306-39436375) Length: 70 bp Type: Ile Anticodon: GAT at 34-36 (39436339-39436341) Score: 25.63 Possible pseudogene: HMM Sc=9.83 Sec struct Sc=15.80 * | * | * | * | * | * | * Seq: AGCTcTGGTGACCTAGTGGTAAGGAATTGCGCTGATAACCCAAAATTACATGGTTCGAATCCACCGGCTA Str: >>>>..>>...>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna47 (40433991-40434060) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (40434024-40434026) Score: 22.23 * | * | * | * | * | * | * Seq: AGCTcTGGTAGCCTAGTAGTAAGGAGTTAGATTGCCAATCCAAAGGCaAGTGGTTCAAATCCACCAGCTG Str: >>>>..>>...>>>.......<<<..>>.>>.......<<.<<.......>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna48 (40755289-40755355) Length: 67 bp Type: Gly Anticodon: TCC at 31-33 (40755319-40755321) Score: 21.93 Possible pseudogene: HMM Sc=17.10 Sec struct Sc=4.83 * | * | * | * | * | * | * Seq: GGTGAAGGTTCAGTGGTAGAATTCTCGCTTTCCATGCTGGGGACCCAAGTTTGATTCCCGGCTACCA Str: >>>>...>>>>.......<<<<.>>.>>.......<<.<<....>>..>.......<..<<.<<<<. gi|408541801|gb|JH947131.1|.trna49 (42172457-42172526) Length: 70 bp Type: Gly Anticodon: GCC at 33-35 (42172489-42172491) Score: 20.48 Possible pseudogene: HMM Sc=15.88 Sec struct Sc=4.60 * | * | * | * | * | * | * Seq: CGTCTGGTGGCTTAGTGGTAAAGAACTGGGCTGCCAACCCAAAGGCaCATGGTTGAAATTCACCAGCTGC Str: >>.>>>>...>>>.......<<<...>>>>.......<<<<........>>>.......<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna50 (42483803-42483873) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (42483835-42483837) Score: 20.50 Possible pseudogene: HMM Sc=27.25 Sec struct Sc=-6.75 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCAATTTCAGAGGtACACGGTTCAAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>.>.......<.<<<........>>.......<<.<<<<<.<<. gi|408541801|gb|JH947131.1|.trna51 (43103055-43103131) Length: 77 bp Type: Cys Anticodon: GCA at 32-34 (43103086-43103088) Score: 21.50 Possible pseudogene: HMM Sc=9.40 Sec struct Sc=12.10 * | * | * | * | * | * | * | * Seq: CTCTGGTGGTCTCGTGGCAGGACGCTGCACTGCAGTTCCAGAGGCGCGtGGTTCAAATCCCGAtgctctGCTGGAGA Str: >>>>>>..>>>>.......<<<<.>>>.>.......<.<<<.....>>.>>.......<<<<........<<<<<<. gi|408541801|gb|JH947131.1|.trna52 (43331111-43331183) Length: 73 bp Type: Ser Anticodon: ACT at 34-36 (43331144-43331146) Score: 31.10 Possible pseudogene: HMM Sc=35.22 Sec struct Sc=-4.12 * | * | * | * | * | * | * | Seq: GCGTTGTtGGCACAGTAGTtAATGGCTTGGGCTACTAACCAAAAGGtTGGTGGTTCAAACCCACCCAGCAGCT Str: >>>>>>....>>..........<<..>>.>>.......<<.<<.....>>>>>.......<<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna53 (43693755-43693829) Length: 75 bp Type: Ser Anticodon: GCT at 36-38 (43693790-43693792) Score: 20.93 Possible pseudogene: HMM Sc=28.05 Sec struct Sc=-7.12 * | * | * | * | * | * | * | Seq: GAGAGCTTggtAGCCTAGTGGTAAAGTGTTATACTGCTAACCCAAAGGtAGATGGTTCAAGTCCACCAGCTTCTC Str: >.>>>>>.....>>.>.......<.<<.>>.............<<.....>.>>>.......<<<.<<<<<<.<. gi|408541801|gb|JH947131.1|.trna54 (43930883-43930959) Length: 77 bp Type: Gly Anticodon: GCC at 32-34 (43930914-43930916) Score: 22.82 * | * | * | * | * | * | * | * Seq: TCCTGGTGGCCTAGTGGTAAGGAGTTATGTTGCCAACTCAAAAGcAGGGGGTTCGAATCCACCagctacCCCAGGAG Str: >>>>>>...>>>.......<<<..>>..>.......<..<<.....>>.>>.......<<.<<.......<<<<<<. gi|408541801|gb|JH947131.1|.trna55 (44068441-44068508) Length: 68 bp Type: Gly Anticodon: CCC at 30-32 (44068470-44068472) Score: 24.43 Possible pseudogene: HMM Sc=31.65 Sec struct Sc=-7.22 * | * | * | * | * | * | * Seq: GCATTGGTTCAGTGGTAACATTCTCACCTCCCAATCTAGAGGCCTGGGTTCTATTCCCGACCAATGCA Str: >>>>>>>>...........<<.>>.............<<.....>>>>.......<<<<..<<<<<<. gi|408541801|gb|JH947131.1|.trna56 (44160305-44160377) Length: 73 bp Type: Gly Anticodon: GCC at 33-35 (44160337-44160339) Score: 20.43 Possible pseudogene: HMM Sc=21.88 Sec struct Sc=-1.45 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCCAATGGCAAGGAGCTGTGCTGCCAACGCAAAGGtGTGTGGTTCAAATCCACcAGCTGCTCT Str: >..>.>....>>.........<<...>>>>.......<<<<......>>>>>.......<<<<.<.<.<..<. gi|408541801|gb|JH947131.1|.trna57 (44194542-44194613) Length: 72 bp Type: Asp Anticodon: GTC at 33-35 (44194574-44194576) Score: 25.49 Possible pseudogene: HMM Sc=20.65 Sec struct Sc=4.84 * | * | * | * | * | * | * | Seq: AACAACGTAATCTAGTGGTAAAGAGTTGGGCTGTCAAACAAAAGGcAGGTGGTTTGAATCCACCTGTTGCTC Str: >.>>>>>...>.>.......<.<..>>.>.........<.<<.....>>>>>.......<<<<<<<<<<.<. gi|408541801|gb|JH947131.1|.trna58 (44487016-44487090) Length: 75 bp Type: Ser Anticodon: ACT at 35-37 (44487050-44487052) Score: 21.28 Possible pseudogene: HMM Sc=23.46 Sec struct Sc=-2.18 * | * | * | * | * | * | * | Seq: ACACTGCTGGCACAGTGGTtaAAAGAGTGTGACTACTAACCAAAAGGtCAATGGTTCAAAACCAAcTGCTCTGTA Str: >>>..>>...>.............<..>.>>.........<<.<.....>.>>>.......<<<..<<<..<<<. gi|408541801|gb|JH947131.1|.trna59 (44799786-44799856) Length: 71 bp Type: Asp Anticodon: GTC at 34-36 (44799819-44799821) Score: 22.07 Possible pseudogene: HMM Sc=28.67 Sec struct Sc=-6.60 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGGtAAAGAGTTGTGCTGTCAAGCCAATGGCaCGTGGTTCGAATCCACAGGAGAA Str: .>>>>.>...>.>........<.<..>>>...........<<<.......>>>.......<<<<.<<<<.. gi|408541801|gb|JH947131.1|.trna60 (44807012-44807081) Length: 70 bp Type: Ala Anticodon: GGC at 33-35 (44807044-44807046) Score: 30.27 * | * | * | * | * | * | * Seq: CTTCTGGTGGCCTAGTGGTAAGGAGTTGTGCTGGCAACCCAAAGGCaTGTGGTTCAAATCCACCAGCTGC Str: >..>>>>...>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<..<. gi|408541801|gb|JH947131.1|.trna61 (45406868-45406940) Length: 73 bp Type: Gly Anticodon: GCC at 34-36 (45406901-45406903) Score: 31.13 Possible pseudogene: HMM Sc=33.13 Sec struct Sc=-2.00 * | * | * | * | * | * | * | Seq: GCTCTGATGGCCTAGTGGAtAAGGAGTGGGGCTGCCACCCCAAAGGcAGGCAGTTCAAATCTGCTAGGGTGCT Str: >>.>>.....>>>........<<<..>.>>>.......<<<.<.....>>>>>.......<<<<<..<<.<<. gi|408541801|gb|JH947131.1|.trna62 (45945320-45945390) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (45945352-45945354) Score: 22.64 Possible pseudogene: HMM Sc=28.01 Sec struct Sc=-5.37 * | * | * | * | * | * | * | Seq: GTTCTGGTGGCCTAATGGTAAGGAGTTGCGCTGCCAACCCAAAGGCGtGTGGTTCAAGTCTGCCAGTAGCT Str: >>>.>.>...>>>.......<<<..>>>.>.......<.<<<....>..>>>.......<<<<<.<.<<<. gi|408541801|gb|JH947131.1|.trna63 (46301348-46301417) Length: 70 bp Type: Cys Anticodon: GCA at 34-36 (46301381-46301383) Score: 21.41 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCCTAGTGGTAGGAAATTGTGCTGCAATCCCAAAGGCaCATGGTTCAAATCCACTAGCTA Str: >>>>..>>....>>.......<<...>>>.>.......<.<<<.......>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna64 (46369651-46369720) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (46369683-46369685) Score: 21.09 Possible pseudogene: HMM Sc=27.19 Sec struct Sc=-6.10 * | * | * | * | * | * | * Seq: GCACTGGTGGTCTAGTGGGAAGAAGCTGCACTGCAATCCCAGAGGtgCCTGGTTCAAATCCACCAGATCC Str: >..>>>>...>>>.......<<<..>>>...........<<<.......>>>.......<<<<<<<..<. gi|408541801|gb|JH947131.1|.trna65 (47438117-47438048) Length: 70 bp Type: Asp Anticodon: GTC at 33-35 (47438085-47438083) Score: 21.48 * | * | * | * | * | * | * Seq: CTTCTGGTGGCTTAGTGGTAAGGAGTTGTGCTGTCACCACAAAGGCaAGCGGTTCAAATCTGCCAGTTGC Str: >..>>>>...>>>.......<<<..>>>>>.......<<<<<.......>>>.......<<<<<<<..<. gi|408541801|gb|JH947131.1|.trna66 (46704357-46704288) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (46704324-46704322) Score: 28.20 * | * | * | * | * | * | * Seq: AGtTCTAGTGGCCTAGTGATAAGGCGTTGAGCTGCCAACCCAAAGGCaCGTGGTTCGACTCCACTAGCTA Str: >>..>>>>..>>>>.......<<<<.>>>.>.......<.<<<.......>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna67 (46601360-46601288) Length: 73 bp Type: Ser Anticodon: GCT at 34-36 (46601327-46601325) Score: 29.22 * | * | * | * | * | * | * | Seq: AACACTGTGTCCAAATGGTcAAGGCGCCTGGCTGCTGGCCAAAAGCtCAGTGGTTCGAACCCACCCAGTGGTT Str: >.>>>>>...>>..........<<....>>>.......<<<........>>>>.......<<<<.<<<<<.<. gi|408541801|gb|JH947131.1|.trna68 (46389653-46389581) Length: 73 bp Type: Cys Anticodon: GCA at 33-35 (46389621-46389619) Score: 21.24 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGAAAATGTGCTGCAATCTCATAGGcATGTGGTTCAAATCCACcACCCGTTCC Str: >..>.>>....>>.......<<...>>>.>.......<.<<<.....>>>>>.......<<<<.<<<.<..<. gi|408541801|gb|JH947131.1|.trna69 (46301310-46301240) Length: 71 bp Type: Glu Anticodon: TTC at 33-35 (46301278-46301276) Score: 32.58 Possible pseudogene: HMM Sc=39.74 Sec struct Sc=-7.16 * | * | * | * | * | * | * | Seq: GCACTAGTGGTTCAGGGGTAGAATTCTTGCCTTTCATGAAGATGGCTTGGGTTCAACTCCTGGCTAAGGCA Str: >>..>>>..>>>>.......<<<<..>>.>.......<.<<.....>>>>>.......<<<<<<<<..<<. gi|408541801|gb|JH947131.1|.trna70 (46211597-46211527) Length: 71 bp Type: Arg Anticodon: TCT at 33-35 (46211565-46211563) Score: 24.18 Possible pseudogene: HMM Sc=35.62 Sec struct Sc=-11.44 * | * | * | * | * | * | * | Seq: GCAATGCTAGTTCAGTGGTAGAATTTTTACCTTCTATGTGGGAGGCCCAGGTTCAGTTCCCAGCCAAGGCA Str: >>..>>...>>>>.......<<<<.>>>>>.......<<<<<....>..>>.......<<..<.<<..<<. gi|408541801|gb|JH947131.1|.trna71 (45495470-45495399) Length: 72 bp Type: Cys Anticodon: ACA at 34-36 (45495437-45495435) Score: 25.62 Possible pseudogene: HMM Sc=27.97 Sec struct Sc=-2.35 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGGAGCTGcAGCTACAATCCCAGAGGtgCATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>..>.......<.<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna72 (45412820-45412742) Length: 79 bp Type: Gly Anticodon: GCC at 33-35 (45412788-45412786) Score: 21.00 Possible pseudogene: HMM Sc=9.05 Sec struct Sc=11.95 * | * | * | * | * | * | * | * Seq: TCCCTGGTGGCCTAGTGGCAAGGAATTGTTCTGCCAACACAAAGGtACACGGTTCAAATccaccatCCGCTCTATGGAG Str: >>>.>>>...>>>.......<<<..>>>>.........<<<<.......>>>..............<<<..<<<.<<<. gi|408541801|gb|JH947131.1|.trna73 (45321992-45321915) Length: 78 bp Type: Gly Anticodon: GCC at 33-35 (45321960-45321958) Score: 21.29 Possible pseudogene: HMM Sc=17.41 Sec struct Sc=3.88 * | * | * | * | * | * | * | * Seq: CTGTGGATGGCCTAGTGGTAAGGCGCTGTGCTGCCAACCCAAAGATAGGCAGTTTGAATcccctgGCTGCTCTGCAGG Str: >>>>>>>..>>>>.......<<<<..>>.>.......<.<<.......>>>>..............<<<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna74 (45247739-45247669) Length: 71 bp Type: Tyr Anticodon: GTA at 33-35 (45247707-45247705) Score: 24.21 Possible pseudogene: HMM Sc=36.01 Sec struct Sc=-11.80 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACACTGCACTGTAATCCCAGAGGtACATGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna75 (44893545-44893474) Length: 72 bp Type: Gly Anticodon: TCC at 34-36 (44893512-44893510) Score: 73.26 * | * | * | * | * | * | * | Seq: GCGTTGGTGGTATAGTGGTgAGCATAGCTGCCTTCCAAGCAGTTGACCCGGGTTCGATTCCCGGCCAACGCA Str: >>>>>>>..>>.>........<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna76 (44626975-44626905) Length: 71 bp Type: Ser Anticodon: GCT at 33-35 (44626943-44626941) Score: 22.46 Possible pseudogene: HMM Sc=24.09 Sec struct Sc=-1.63 * | * | * | * | * | * | * | Seq: GCTCTGGTAGTTCAGTGGTCAAACATTCAGCTGCTAACTAAAAGGtTAGTGGTTCAAGCCCACCAGTTGCT Str: >>..>.>..>>>.........<<<.>>.>>.......<<.<<......>>>>.......<<<<<.<..<<. gi|408541801|gb|JH947131.1|.trna77 (43878846-43878777) Length: 70 bp Type: Gly Anticodon: GCC at 33-35 (43878814-43878812) Score: 33.12 * | * | * | * | * | * | * Seq: ACTCTGGTGGCCCAGTGGTAAGGTGTTGTTTTGCCAACCCAAAGGcCTGAGGTTCGAATCCACCAGCTTA Str: >..>>>>..>>>.........<<<.>>>...........<<<.....>..>>.......<<<<<<<..<. gi|408541801|gb|JH947131.1|.trna78 (42467183-42467111) Length: 73 bp Type: Gly Anticodon: TCC at 33-35 (42467151-42467149) Score: 34.43 Possible pseudogene: HMM Sc=38.03 Sec struct Sc=-3.60 * | * | * | * | * | * | * | Seq: GCCGTGGTGGCTCAGTGGTAGAATTCTCACCTTCCATGTGGGAGACCGGGGTTCGATTCCTGGCTcaGTGGTA Str: >>>>>>>..>.>>.......<<.<.>>>>>.......<<<<<....>.>>>.......<<<.<<<..<<<<<. gi|408541801|gb|JH947131.1|.trna79 (42458321-42458251) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (42458289-42458287) Score: 21.39 Possible pseudogene: HMM Sc=22.79 Sec struct Sc=-1.40 * | * | * | * | * | * | * | Seq: TGACAGATGGTTAGGTGGTAGAATTCTCACCTTCCCCGTGGGAGACCTAGGTTCGATTCCCAGCCAGTGTG Str: ..>>.>...>>>.........<<<.>>>>>.......<<<<<....>>.>>.......<<.<<.<.<<... gi|408541801|gb|JH947131.1|.trna80 (42392631-42392560) Length: 72 bp Type: Phe Anticodon: GAA at 31-33 (42392601-42392599) Score: 27.10 * | * | * | * | * | * | * | Seq: GTAGCCGGCCTAGTGGTATGAAGCTGTGCTGAAATCCCAGAGGcAGGTGGTTCAAATCCACCagCTGCTCCA Str: >.>>>.>..>.........<...>>>.>.......<.<<<.....>>>>>.......<<<<<..<.<<<.<. gi|408541801|gb|JH947131.1|.trna81 (42210994-42210924) Length: 71 bp Type: Cys Anticodon: ACA at 33-35 (42210962-42210960) Score: 20.04 Possible pseudogene: HMM Sc=19.18 Sec struct Sc=0.86 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTCTAGTGGCAAGAAGCTGGGCTACAGTCCCGAAGGCaTGTGGTTTGAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<...>>>>.......<<<<........>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna82 (41816745-41816671) Length: 75 bp Type: Gly Anticodon: GCC at 37-39 (41816709-41816707) Score: 20.65 Possible pseudogene: HMM Sc=9.69 Sec struct Sc=10.96 * | * | * | * | * | * | * | Seq: GGAGCTCcgaTAGCCTAGATGGCAAGGAGTTGCACTGCCAATCCAAAGAcAGGTGGTTCAAATCCACCAACTCCT Str: >>>>.>.......>>>........<<<..>>>.>.......<.<<<.....>>>>>.......<<<<<<.<<<<. gi|408541801|gb|JH947131.1|.trna83 (41661734-41661664) Length: 71 bp Type: Tyr Anticodon: GTA at 33-35 (41661702-41661700) Score: 22.09 Possible pseudogene: HMM Sc=29.23 Sec struct Sc=-7.14 * | * | * | * | * | * | * | Seq: AATCTGGTGGCTTAGTGGTAAGGAGTTGAGCTGTAAACCCAAAGGCCAgTGGTTCAAATCTTACCAGTTGC Str: .>.>>>>...>>>.......<<<..>>>.>.......<.<<<.....>..>>.......<<<.<<<<.<.. gi|408541801|gb|JH947131.1|.trna84 (41287792-41287722) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (41287760-41287758) Score: 22.28 Possible pseudogene: HMM Sc=34.99 Sec struct Sc=-12.71 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCTTAGTGGCAAGAAGCTGCACTGCAATTCCAGAGGtACGTGGTTCGAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>.>.......<.<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna85 (41028885-41028816) Length: 70 bp Type: Glu Anticodon: TTC at 33-35 (41028853-41028851) Score: 29.60 Possible pseudogene: HMM Sc=27.48 Sec struct Sc=2.12 * | * | * | * | * | * | * Seq: GCTCTGGTGGCTTAGTGGTAAGGAGTTGCACTTTCAACTCAAAGACaTGTGGTTCGAATCCACTGGAGAA Str: .>>>>>>...>>>.......<<<..>>>...........<<<.......>>>.......<<<<<<<<<.. gi|408541801|gb|JH947131.1|.trna86 (40982734-40982662) Length: 73 bp Type: Gly Anticodon: GCC at 37-39 (40982698-40982696) Score: 20.51 Possible pseudogene: HMM Sc=19.36 Sec struct Sc=1.15 * | * | * | * | * | * | * | Seq: CTCTGAAgtgaTGGCTTAGTGGTAAGGAGTTGCACTGCCAATCCAAAGGtTCATGGTTCAAATCCACAGGAGA Str: >>>>..........>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<..<<<<. gi|408541801|gb|JH947131.1|.trna87 (40704184-40704114) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (40704152-40704150) Score: 35.95 Possible pseudogene: HMM Sc=37.88 Sec struct Sc=-1.93 * | * | * | * | * | * | * | Seq: GCAGTGGTGGTCCAGTGGTTGGATTCTCGCCGTCCATGCTGGAGATCCTGGTTCAATACCCGGCCCGTGCA Str: >>>..>>..>>>>.......<<<<.>>.>>.......<<.<<....>>.>>.......<<.<<<<..<<<. gi|408541801|gb|JH947131.1|.trna88 (40531298-40531220) Length: 79 bp Type: Ser Anticodon: GCT at 34-36 (40531265-40531263) Score: 22.30 Possible pseudogene: HMM Sc=25.32 Sec struct Sc=-3.02 * | * | * | * | * | * | * | * Seq: GCCGTGATGGCATAGTGGTtAAACTGCTTGGTTGCTAACCTCGAGGtCAGTGGTTCAAGCcactagCCATTCCACAGCT Str: >>.>>>...>..>........<..<.>..>>.......<<..<.....>>>>>.............<<<<<.<<<.<<. gi|408541801|gb|JH947131.1|.trna89 (40476763-40476693) Length: 71 bp Type: Asp Anticodon: GTC at 33-35 (40476731-40476729) Score: 22.80 Possible pseudogene: HMM Sc=26.76 Sec struct Sc=-3.96 * | * | * | * | * | * | * | Seq: GCACTTGTGGCTTAGTGGTAAGGAGTTTTGTTGTCAACCAAAAGGcACTAGGTTCAAATACACCAGATGCA Str: >>>.>>>...>>>.......<<<..>>>.>.......<.<<<......>.>.........<<.<<<.<<<. gi|408541801|gb|JH947131.1|.trna90 (39528794-39528724) Length: 71 bp Type: Ser Anticodon: GCT at 34-36 (39528761-39528759) Score: 32.19 Possible pseudogene: HMM Sc=35.62 Sec struct Sc=-3.43 * | * | * | * | * | * | * | Seq: TCTGTGGTGGCCCAATGGTtAGAGTGCTTGGCTGCTATCTAGGAGGtCAGGGGTTCAATTCACCAGCAGCT Str: .>>>>.>..>>.>........<.<<.>>>>>.......<<<<<.......>.>.......<.<<.<<<<.. gi|408541801|gb|JH947131.1|.trna91 (38678940-38678867) Length: 74 bp Type: Gly Anticodon: GCC at 33-35 (38678908-38678906) Score: 22.98 Possible pseudogene: HMM Sc=23.65 Sec struct Sc=-0.67 * | * | * | * | * | * | * | Seq: ACTCTGGTGGCTTAGTGGTAAGGAGTTGTGCTGCCAACTCAAAGGtGTGTGGTTCGAACCTACcaGCTGGTCTG Str: >..>>>>...>>>.......<<<..>>>.>.......<.<<<.....>>>>>.......<<<<..<<<<<..<. gi|408541801|gb|JH947131.1|.trna92 (38656078-38656008) Length: 71 bp Type: Thr Anticodon: GGT at 34-36 (38656045-38656043) Score: 22.76 Possible pseudogene: HMM Sc=18.44 Sec struct Sc=4.32 * | * | * | * | * | * | * | Seq: GCTTTGGTGGCTATGTGGTtAAAGCACTTGCTTGGTAAGCAAAAGGtCAGCCGTTCAAGCCTATCAACTCT Str: >..>>>>..>>>..........<<<..>>>>.......<<<<.......>..>.......<<.<<<<..<. gi|408541801|gb|JH947131.1|.trna93 (38304001-38303932) Length: 70 bp Type: Arg Anticodon: GCG at 33-35 (38303969-38303967) Score: 22.76 Possible pseudogene: HMM Sc=30.71 Sec struct Sc=-7.95 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCGATCCCAGAGGtACATGGTTCGAATCCACTAGAGAA Str: .>>>>>>....>>.......<<...>>>...........<<<.......>>>.......<<<<<<<<<.. gi|408541801|gb|JH947131.1|.trna94 (38136924-38136851) Length: 74 bp Type: Cys Anticodon: GCA at 33-35 (38136892-38136890) Score: 20.53 Possible pseudogene: HMM Sc=30.13 Sec struct Sc=-9.60 * | * | * | * | * | * | * | Seq: GTGTTGGTGGCCTAGTGGTAAGACACTGCACTGCAGTTTTGAAGGCCTGtGGTTCAAATCCacCAGCTACTCCA Str: >.>.>>>..>.>>.......<<.<..>>.>.......<.<<.....>>>.>>.......<<..<<<<<<.<.<. gi|408541801|gb|JH947131.1|.trna95 (37920886-37920815) Length: 72 bp Type: Ser Anticodon: GCT at 33-35 (37920854-37920852) Score: 25.57 Possible pseudogene: HMM Sc=28.77 Sec struct Sc=-3.20 * | * | * | * | * | * | * | Seq: GGTGGGTGGTATAGTGGTtAGAACATCCGGCTGCTAACCAGCAGGtCAGAGGTTAGAACCTGTCAgTCACTG Str: >>>>>>..>>.>........<.<<..>.>>.......<<.<......>.>>>......<<<.<<..<<<<<. gi|408541801|gb|JH947131.1|.trna96 (37855757-37855687) Length: 71 bp Type: Ser Anticodon: GCT at 35-37 (37855723-37855721) Score: 21.11 Possible pseudogene: HMM Sc=20.55 Sec struct Sc=0.56 * | * | * | * | * | * | * | Seq: GGTACCTGGGGGtcAGTGGTtACCGTGCTTGGCTGCTCACCAAAAGGtCAGTGGTTCGAATCCCCTGACCA Str: >>>..>..>.>>..........<<.<..>>>>.......<<<<......>>.>>.......<<.<<<<<<. gi|408541801|gb|JH947131.1|.trna97 (37676171-37676100) Length: 72 bp Type: Tyr Anticodon: GTA at 33-35 (37676139-37676137) Score: 25.08 Possible pseudogene: HMM Sc=32.72 Sec struct Sc=-7.64 * | * | * | * | * | * | * | Seq: GCCTTCATGGTCCAGTGGTTAAACATTTGTCTGTAAACTAAAAGGtTGGTGGTTTGAACCCACCAGTTGCTT Str: >.>..>...>>...........<<.>>>>.........<<<<.....>>>>>.......<<<<<.<..<.<. gi|408541801|gb|JH947131.1|.trna98 (37577307-37577231) Length: 77 bp Type: Gly Anticodon: ACC at 36-38 (37577272-37577270) Score: 23.43 * | * | * | * | * | * | * | * Seq: GGAGCTctgTTGGCTGAGTGGTAAGGAGTTGTGCTACCAACACAAAGGcCCATAGTTCAAAACCACGAacTGCTTCA Str: >>>>>....>...>>.........<<..>>>>>.......<<<<<.....>.>.>.......<.<.<<...<<<<<. gi|408541801|gb|JH947131.1|.trna99 (37557076-37557007) Length: 70 bp Type: Gly Anticodon: TCC at 33-35 (37557044-37557042) Score: 29.08 Possible pseudogene: HMM Sc=35.07 Sec struct Sc=-5.99 * | * | * | * | * | * | * Seq: GCATGGGTGGTTTAGTGGCAGAGCGCTTGCCTTCCACGTGGGAGACCTGGGTTTGATTCCTGACCATGCA Str: >>>>>>...>>>>.......<<<<.>>>>>.......<<<<<....>.>>>.......<<<<.<<<<<<. gi|408541801|gb|JH947131.1|.trna100 (37503076-37503006) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (37503044-37503042) Score: 31.55 Possible pseudogene: HMM Sc=36.60 Sec struct Sc=-5.05 * | * | * | * | * | * | * | Seq: GCACTAGTGGTTTGGTGGTAGAATTCTTGCCTTCCATGCAGGAGACCCAGGTTCAGTTCCCAGCCAATACA Str: >.>.>.>..>>>>.......<<<<.>>>>>.......<<<<<....>..>>.......<<..<<.<.<.<. gi|408541801|gb|JH947131.1|.trna101 (37156907-37156836) Length: 72 bp Type: Ser Anticodon: GCT at 33-35 (37156875-37156873) Score: 31.11 Possible pseudogene: HMM Sc=32.05 Sec struct Sc=-0.94 * | * | * | * | * | * | * | Seq: GTCTTGGTGGCATAATGGTtcAGTGTTTGGCTGCTAACTGAAAGGtCAGTGGTTTGAGTCCACTCTGGGGAA Str: .>>>>>>..>>>>.........<<<<.>>>.......<<..<.....>>>>>.......<<<<<<<<<<<.. gi|408541801|gb|JH947131.1|.trna102 (36587345-36587275) Length: 71 bp Type: Gly Anticodon: GCC at 35-37 (36587311-36587309) Score: 23.62 * | * | * | * | * | * | * | Seq: GGCTCTGgTGGCCTAGTGGGtAAGGAGTTGTGCTGCCAACCCAAAGGcCAGTGGTTCCAATCCACCAGCTG Str: >>>>.......>>>........<<<..>>>.>.......<.<<<......>>>>.......<<<<.<<<<. gi|408541801|gb|JH947131.1|.trna103 (35981919-35981850) Length: 70 bp Type: Asp Anticodon: GTC at 34-36 (35981886-35981884) Score: 22.30 * | * | * | * | * | * | * Seq: AGCTCTGgTGGCTTAGTGGTAAGGTGTTATGCTGTCAATTCAAAGGtAGGTGGTTTGAATCCACTAGCTG Str: >>>>......>>>>.......<<<<.>>..>.......<..<<.....>>>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna104 (33830699-33830629) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (33830667-33830665) Score: 29.49 Possible pseudogene: HMM Sc=38.55 Sec struct Sc=-9.06 * | * | * | * | * | * | * | Seq: GTGTTGGTAGTGCAAGGGTAGAATCCCCAGCTTCCATGCTGGAGACCTGGGTTCAACTCCCGGTCAGTGCA Str: >>>>>>>..>>.>.......<.<<.>>.............<<....>>>>>.......<<<<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna105 (33826449-33826379) Length: 71 bp Type: Arg Anticodon: TCT at 33-35 (33826417-33826415) Score: 21.44 Possible pseudogene: HMM Sc=41.93 Sec struct Sc=-20.49 * | * | * | * | * | * | * | Seq: GCCGTGGTGGTCCAGTGGTAGAATTCTCACCTTCTACTTGGGAGACCCAAGTTCTATTCCCAGTCGGTGCA Str: >>..>>>..>>.>.......<.<<.>>>>.........<<<<....>...>.......<...<<<<..<<. gi|408541801|gb|JH947131.1|.trna106 (33814427-33814356) Length: 72 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 21.70 Possible pseudogene: HMM Sc=28.14 Sec struct Sc=-6.44 * | * | * | * | * | * | * | Seq: CCTTTGGTGGTGCAGTGGTtAGATCATTAGCTTTGAAGCACAAGGtCAGTGGTTCAACTCTACCCTGAGAGG Str: >.>>>>>..>..>........<..<.>..>>......<<..<......>>>>.......<<<<.<<<<<.<. gi|408541801|gb|JH947131.1|.trna107 (33711779-33711709) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (33711747-33711745) Score: 20.33 Possible pseudogene: HMM Sc=17.77 Sec struct Sc=2.56 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTCTAGTGGCAAGAAGCTGTGCTGCAATCCCAGAAGtATGCAGTTCAAATCCACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>.>.......<.<<<.....>>..>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna108 (33622361-33622292) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (33622328-33622326) Score: 20.67 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCCTAGTGGTAAGGAGTTGTACTGCCAACACAAAGGCaCAAGGTTCAAATCCACCAGCTG Str: >>>>..>>...>>>.......<<<..>>>>.........<<<<........>>.......<<.<<<<<<. gi|408541801|gb|JH947131.1|.trna109 (33374627-33374557) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (33374595-33374593) Score: 22.61 Possible pseudogene: HMM Sc=25.41 Sec struct Sc=-2.80 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCCAGTGGTAAGGAGTTGTGCTGCCAACTCAGAGGCaCATGGTTCAAATTCACCAGCtGCG Str: >>.>>>>...>>.........<<..>>>.>.......<.<<<.......>>>.......<<<<<<<..<<. gi|408541801|gb|JH947131.1|.trna110 (32740388-32740312) Length: 77 bp Type: Gly Anticodon: CCC at 36-38 (32740353-32740351) Score: 23.21 * | * | * | * | * | * | * | * Seq: GGAGCTCtggTGGCCCAATGGTAAGGAATTGTGCTCCCAGCGCAAAGGtAGATGGTTCAAATCCAGCagaTGCTCCA Str: >>>>>........>>.........<<..>>>>>.......<<<<<.....>.>>>.......<<<.<....<<<<<. gi|408541801|gb|JH947131.1|.trna111 (32684338-32684262) Length: 77 bp Type: Ser Anticodon: GCT at 33-35 (32684306-32684304) Score: 24.07 Possible pseudogene: HMM Sc=-1.35 Sec struct Sc=25.42 * | * | * | * | * | * | * | * Seq: CTCTGGTGGTAAAGTAGGTTATATGTTGGGTTGCTAACACAAAGGtGGGTGGTTCAAATCCGCCagtcaCTCTGAGG Str: >>>.>>..>>>..........<<<.>>>.>.......<.<<<.....>>>>>.......<<<<<......<<.<<<. gi|408541801|gb|JH947131.1|.trna112 (32475486-32475419) Length: 68 bp Type: Arg Anticodon: CCT at 29-31 (32475458-32475456) Score: 20.62 * | * | * | * | * | * | * Seq: GGTGGCTTAACTGGTtAAGTGTTTCACCCCTAACCAAAAGGtCAGTTGTTCAAATCCACCAGTCACTC Str: >>>>>>>..>>>.....<<<.>>>...........<<<......>>.>.......<.<<.<<<<<<<. gi|408541801|gb|JH947131.1|.trna113 (32386759-32386687) Length: 73 bp Type: Gly Anticodon: GCC at 33-35 (32386727-32386725) Score: 20.56 Possible pseudogene: HMM Sc=16.91 Sec struct Sc=3.65 * | * | * | * | * | * | * | Seq: GCTCTGCTGGCTTAGTGGGGAGGAACTGTGCTGCCAACCCAGAGGtTTGTGGTTCAAATCCACcAGCTGCTCC Str: >..>.>>...>>>.......<<<..>>>.>.......<.<<<.....>>>>>.......<<<<.<<<.<..<. gi|408541801|gb|JH947131.1|.trna114 (32053735-32053661) Length: 75 bp Type: Ser Anticodon: ACT at 34-36 (32053702-32053700) Score: 20.86 Possible pseudogene: HMM Sc=25.67 Sec struct Sc=-4.81 * | * | * | * | * | * | * | Seq: GCCGTGGTTTCTCAGTGGTtAGAGTTCTTAGCTACTAACATGAAGGtCCATGGTTCGAGTCCACtaGCCATCCCG Str: >..>>>>...>>>........<<<...>..>.......<..<......>.>>>.......<<<...<<<<<..<. gi|408541801|gb|JH947131.1|.trna115 (29672962-29672892) Length: 71 bp Type: Glu Anticodon: TTC at 33-35 (29672930-29672928) Score: 33.17 Possible pseudogene: HMM Sc=30.76 Sec struct Sc=2.41 * | * | * | * | * | * | * | Seq: GCAGTGGTGGTTCAGGGGTAGAATGTTCACCTTTCATGTGGGAAACACAGGTTCAGTTCCTGGTCAAGGCA Str: >>..>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>.......<<<<.<<<..<<. gi|408541801|gb|JH947131.1|.trna116 (29354937-29354868) Length: 70 bp Type: Gly Anticodon: TCC at 32-34 (29354906-29354904) Score: 26.28 Possible pseudogene: HMM Sc=22.79 Sec struct Sc=3.49 * | * | * | * | * | * | * Seq: GCAGTGCGGCTCTGTGGTGGAACCCTTGTCTTCCATGCTGGAGGCCTGGGTTCGATTCTCAGtCACTGCA Str: >>>>>>..>.>>.......<<.<.>>.>>.......<<.<<....>>>>>.......<<<<<.<<<<<<. gi|408541801|gb|JH947131.1|.trna117 (28350663-28350593) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (28350631-28350629) Score: 20.92 Possible pseudogene: HMM Sc=32.42 Sec struct Sc=-11.50 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACACTGCACTGCAATCCCAGAAGtACGTGGTTCAAATCCACCAGAAGCT Str: >>>.>.>..>.>>.......<<.<.>>>...........<<<......>>>>.......<<<<<.<.<<<. gi|408541801|gb|JH947131.1|.trna118 (24541378-24541308) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (24541346-24541344) Score: 37.91 Possible pseudogene: HMM Sc=43.95 Sec struct Sc=-6.04 * | * | * | * | * | * | * | Seq: GTGTTGTTGGTTCAGTGGTAGAATTCTTGTCTGCCACGCGGGAGACCTGAGTTCGATTACCGGCCAATGCA Str: >>>>>>...>>>>.......<<<<.>>>>>.......<<<<<....>>>...........<<<.<<<<<<. gi|408541801|gb|JH947131.1|.trna119 (24538980-24538910) Length: 71 bp Type: Gly Anticodon: TCC at 32-34 (24538949-24538947) Score: 28.00 Possible pseudogene: HMM Sc=23.66 Sec struct Sc=4.34 * | * | * | * | * | * | * | Seq: TTCTGGTGGCTCAGTGGTAAAGCTCTCACCTTCCGTACAAGAGATCTGGGTTTGATTCCTAGCCAGtGAAA Str: >>>>>>..>>>.........<<<.>>.............<<....>>>>>.......<<<<<<<<..<<<. gi|408541801|gb|JH947131.1|.trna120 (24496277-24496206) Length: 72 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 27.45 Possible pseudogene: HMM Sc=23.03 Sec struct Sc=4.42 * | * | * | * | * | * | * | Seq: TCATTGCTGTTTCAGTGGTAGAATTCTTGCCaTCTCATACAGGAAtCCCAGGTTCAAATCCTAGCTAAGGGA Str: >>.>>>....>>>.......<<<..>>>>..........<<<<....>.>>>.......<<<.<.<<<.<<. gi|408541801|gb|JH947131.1|.trna121 (23924478-23924408) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (23924446-23924444) Score: 23.15 Possible pseudogene: HMM Sc=19.77 Sec struct Sc=3.38 * | * | * | * | * | * | * | Seq: GCTTTAGTGGCTTAGCGGTAAGGAGTTGTGCTGCCAACACAGAGGCATgAGGTTCAAATCCACCTGCTGCT Str: >>..>>>...>>>.......<<<..>>>>>.......<<<<<.....>..>>.......<<<.<<<..<<. gi|408541801|gb|JH947131.1|.trna122 (21128211-21128140) Length: 72 bp Type: Lys Anticodon: TTT at 34-36 (21128178-21128176) Score: 39.93 Possible pseudogene: HMM Sc=41.49 Sec struct Sc=-1.56 * | * | * | * | * | * | * | Seq: GCCCAGCTAGTTCAGTTGGTAAAGCACAAGATTTTTAATCTCAGGGTTGGGGTTCGATCCCATTGTTGGGCA Str: >>>>>>>..>>>..........<<<...>>>.......<<<.......>.>>.......<<.<.<<<<<<<. gi|408541801|gb|JH947131.1|.trna123 (17775279-17775210) Length: 70 bp Type: Asp Anticodon: GTC at 34-36 (17775246-17775244) Score: 21.14 * | * | * | * | * | * | * Seq: AGCTCTGaTAGCTCAGTGGGAAAGAGTTGCACTGTCAATCCAAAGGcAGGTGGTTTGAACCCACTAGCTG Str: >>>>.......>>.........<<..>>>.>.......<.<<<.....>>>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna124 (17595689-17595609) Length: 81 bp Type: Ser Anticodon: TGA at 33-35 (17595657-17595655) Score: 66.57 * | * | * | * | * | * | * | * | Seq: GCTGTGATGGCCGAGTGGTtAAGGGTTGGACTTGAAATTCAATGGGGTTTACCTGCGCAGGTTCGAATCCTGTTCACAGCG Str: >>>>>>>...>>..........<<.>>>>>.......<<<<<..>>>....<<<..>>>>>.......<<<<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna125 (17523739-17523666) Length: 74 bp Type: Sup Anticodon: TTA at 34-36 (17523706-17523704) Score: 20.88 Possible pseudogene: HMM Sc=18.67 Sec struct Sc=2.21 * | * | * | * | * | * | * | Seq: GCTTTGGTGGCCTAATGGGtAAGGAGTTGTGCTTTAAACCCAAAGAcAGGTGGTTTGAATCCACCaCCTGTTCC Str: >..>.>>...>>>........<<<..>>>.>.......<.<<<.....>>>>>.......<<<<<.<<.<..<. gi|408541801|gb|JH947131.1|.trna126 (16211557-16211488) Length: 70 bp Type: Gly Anticodon: ACC at 34-36 (16211524-16211522) Score: 30.22 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCCGAGTGGTAAGGTGCTGCATTACCAATCCAAAGGCaTGTGGTTCAAATCCACCAGCTG Str: >>>>..>>..>>>.........<<<..>>.>.......<.<<........>>>.......<<<<<<<<<. gi|408541801|gb|JH947131.1|.trna127 (16061753-16061683) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (16061721-16061719) Score: 24.78 Possible pseudogene: HMM Sc=34.54 Sec struct Sc=-9.76 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCAAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtACGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>.........<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna128 (14605766-14605697) Length: 70 bp Type: Gly Anticodon: GCC at 33-35 (14605734-14605732) Score: 23.63 Possible pseudogene: HMM Sc=24.29 Sec struct Sc=-0.66 * | * | * | * | * | * | * Seq: TCCCTAGTAGCCTAGTGGTAAGGTATTATACTGCCAATCTAAATGtATAGGGTTCAAATCCACTAGATGC Str: >..>>>>..>>>>.......<<<<.>>>.>.......<.<<<.....>..>>.......<<<<<<<..<. gi|408541801|gb|JH947131.1|.trna129 (9818789-9818722) Length: 68 bp Type: Cys Anticodon: GCA at 32-34 (9818758-9818756) Score: 22.03 * | * | * | * | * | * | * Seq: TTCTGATGGCCTAGTGGCAAGACGCTGCACTGCAATCGCAGAGGCaCGTGGTTCAAATCCACCAGATG Str: .>>>>...>.>>.......<<.<.>>>>.........<<<<......>>>>.......<<<<<<<<.. gi|408541801|gb|JH947131.1|.trna130 (9623190-9623120) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (9623158-9623156) Score: 25.20 Possible pseudogene: HMM Sc=38.04 Sec struct Sc=-12.84 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAAAAGCTGCACTGCAATTCCAGAGGtACATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>.....>.......<....>>>.>.......<.<<<.......>>>.......<<<<<<<<.<<. gi|408541801|gb|JH947131.1|.trna131 (6011057-6010989) Length: 69 bp Type: Gly Anticodon: GCC at 33-35 (6011025-6011023) Score: 27.19 * | * | * | * | * | * | * Seq: AGCTCTTTGGCCTAGTGGTAGGGTGTTGTGCTGCCAACCCAAAGGCaTATTGTTCAAATCCACCAGCGA Str: .>>>..>..>>>>.......<<<<.>>>.>.......<.<<<.........>.......<.<..<<<.. gi|408541801|gb|JH947131.1|.trna132 (5401903-5401821) Length: 83 bp Type: Ser Anticodon: GCT at 34-36 (5401870-5401868) Score: 38.85 * | * | * | * | * | * | * | * | Seq: GCCGTGGTGTCCTAGCGGTtAGGGAGTTGGGCTGCTAACCCAAGGAGGCACCTCtCTgGTGGTTCAAATCCATcACCAGTTCT Str: >...>>>..>>>>........<<<<.>>>>>.......<<<<<..>>>..<<<...>.>>>>.......<<<<.<<<<...<. gi|408541801|gb|JH947131.1|.trna133 (4722331-4722258) Length: 74 bp Type: Ala Anticodon: GGC at 33-35 (4722299-4722297) Score: 23.26 Possible pseudogene: HMM Sc=32.18 Sec struct Sc=-8.92 * | * | * | * | * | * | * | Seq: GTTCTGGTGGCTTAGTGGTAAGGAATTGCACTGGCAATGCAAAGGtACACAGTTCAAATCTACcaGCTGCTCCA Str: >...>>>...>>>.......<<<..>>>>>.......<<<<<.....>..>>.......<<....<<<<...<. gi|408541801|gb|JH947131.1|.trna134 (2764693-2764623) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (2764661-2764659) Score: 21.45 Possible pseudogene: HMM Sc=17.73 Sec struct Sc=3.72 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCTTAGTGGCAATGGGTTGTGCTGCCAACTCAAAGGCaGGAGGTACGAATCCTCCAGCAGCT Str: >>>.>.>...>.>.......<.<..>>>.>.......<.<<<......>>>>.......<<<<<.<.<<<. gi|408541800|gb|JH947132.1|.trna1 (204697-204769) Length: 73 bp Type: Ala Anticodon: GGC at 33-35 (204729-204731) Score: 21.91 Possible pseudogene: HMM Sc=18.78 Sec struct Sc=3.13 * | * | * | * | * | * | * | Seq: GATCTGGTGGCTTAGTGGTAAAGGGTTGGACTGGCAACCCAAAGGCAGATTtTTCAAATctACCTGCAGCTCT Str: >>.>>>....>>>.......<<<..>>>>.........<<<<....>>.>...........<.<<.<<<.<<. gi|408541800|gb|JH947132.1|.trna2 (402768-402837) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (402800-402802) Score: 21.82 Possible pseudogene: HMM Sc=23.65 Sec struct Sc=-1.83 * | * | * | * | * | * | * Seq: ACTCTGGTGGTCTAGTGGCAAGAAGCTGTGCTGCAATCCCAAAGGtTCATGGTTCAAATCCACCAGATGC Str: ..>>>>>...>>>.......<<<...>>.>.......<.<<........>>>.......<<<<<<<<... gi|408541800|gb|JH947132.1|.trna3 (1334637-1334707) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (1334669-1334671) Score: 25.93 Possible pseudogene: HMM Sc=37.65 Sec struct Sc=-11.72 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtgCATGGTTCGAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541800|gb|JH947132.1|.trna4 (1926946-1927018) Length: 73 bp Type: Cys Anticodon: GCA at 34-36 (1926979-1926981) Score: 21.23 Possible pseudogene: HMM Sc=33.76 Sec struct Sc=-12.53 * | * | * | * | * | * | * | Seq: GCTCTGTTTGCGTAGTGGGTtATGTGTTGGGCTGCAACTCAGAAGGtTGGTGGTTCAAATCTGCCAGCTAGCT Str: >>>...>..>>............<<.>>.>>.......<<.<<.....>>>>>.......<<<<<<...<<<. gi|408541800|gb|JH947132.1|.trna5 (3205810-3205882) Length: 73 bp Type: Thr Anticodon: GGT at 33-35 (3205842-3205844) Score: 34.93 Possible pseudogene: HMM Sc=31.61 Sec struct Sc=3.32 * | * | * | * | * | * | * | Seq: GCCTTGTGGTGCAGTGGTcAAGGTGCTCAGCTGGTAACTGAGAGGtCATTGGTTCAAACCCAACCCAGTtGCT Str: >>>>.>..>>............<<.>>>>>.......<<<<<......>>>>.......<<<<.<.<<..<<. gi|408541800|gb|JH947132.1|.trna6 (3354950-3355019) Length: 70 bp Type: Val Anticodon: GAC at 33-35 (3354982-3354984) Score: 22.03 Possible pseudogene: HMM Sc=26.46 Sec struct Sc=-4.43 * | * | * | * | * | * | * Seq: CCTCTGGTGGCTTAGTGGTAAGGAGTTGTGCTGACAACCGAAAGGCaCCAGGTTCAAATCCACCAGATTA Str: ..>>>>>...>>>.......<<<..>>..>.......<..<<........>>.......<<.<<<<<... gi|408541800|gb|JH947132.1|.trna7 (3383758-3383827) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (3383791-3383793) Score: 22.70 Possible pseudogene: HMM Sc=3.21 Sec struct Sc=19.49 * | * | * | * | * | * | * Seq: AGCTcGGGTGGTCTAATGGCAAGGCGTTGAATTGCCAATACAAAGGTGTGcTGTTCAAATCCACCAGCTG Str: >>>>...>..>>>>.......<<<<.>>>.>.......<.<<<....>>>..>.......<<<<<<<<<. gi|408541800|gb|JH947132.1|.trna8 (5551408-5551477) Length: 70 bp Type: Ala Anticodon: TGC at 33-35 (5551440-5551442) Score: 20.74 Possible pseudogene: HMM Sc=29.35 Sec struct Sc=-8.61 * | * | * | * | * | * | * Seq: GCTTTAGTGGCTTAGTGGTAGGGGGCTTGATTTGCAaaCTCAAAGACATGGTTCAAATCCACCAGATGCT Str: >>.>>.>...>>>.......<<<...>>>>.........<<<<.....>>>.......<<<.<.<<.<<. gi|408541800|gb|JH947132.1|.trna9 (7576633-7576703) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (7576665-7576667) Score: 26.53 Possible pseudogene: HMM Sc=26.70 Sec struct Sc=-0.17 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGGAAGGCGCTGTGCTGCAATCCCAAAGGCaCGTGGTTCAAATCTACCAACAGCT Str: >>>.>.>..>>>>.......<<<<..>>.>.......<.<<.......>>>>.......<<<<<.<.<<<. gi|408541800|gb|JH947132.1|.trna10 (7624900-7624978) Length: 79 bp Type: Cys Anticodon: GCA at 33-35 (7624932-7624934) Score: 22.67 Possible pseudogene: HMM Sc=22.55 Sec struct Sc=0.12 * | * | * | * | * | * | * | * Seq: GCTATGGTGGCCCAGTGGTAAGGAACTGGGTTGCAAACCCAAAAAtACGCAGTTCGAATcccccagCTGCTTCATGGTA Str: >>>>>>>...>>.........<<...>>>>.......<<<<.......>>>>..............<<<<.<<<<<<<. gi|408541800|gb|JH947132.1|.trna11 (8266248-8266315) Length: 68 bp Type: Thr Anticodon: GGT at 31-33 (8266278-8266280) Score: 20.80 Possible pseudogene: HMM Sc=7.96 Sec struct Sc=12.84 * | * | * | * | * | * | * Seq: CTGCTGGCATAGTGGGtTATGGGTTGGGCTGGTGACCCAAAGGtTGGCAGTTCAAACCCACCAGCTGA Str: >.>>>..>>>........<<<..>>>>>.......<<<<<.....>>..>.......<..<<<<<.<. gi|408541800|gb|JH947132.1|.trna12 (8298232-8298308) Length: 77 bp Type: Ser Anticodon: GCT at 37-39 (8298268-8298270) Score: 22.04 * | * | * | * | * | * | * | * Seq: GGAGCcCTggTGGCGTAGTGCTtAACGTGTCAGGCTGCTAACTCGAAGtTGGTAGTTCAAATCTAGCAGctGCTCCG Str: >>>>>.>>....>>>>........<<<<.>>.>>.......<<.<<....>.>>>.......<<<.<<<..<<<<<. gi|408541800|gb|JH947132.1|.trna13 (11266357-11266428) Length: 72 bp Type: Ser Anticodon: GCT at 34-36 (11266390-11266392) Score: 22.62 Possible pseudogene: HMM Sc=29.22 Sec struct Sc=-6.60 * | * | * | * | * | * | * | Seq: GCCTTGGTTGCACAATGGTtAGAGCGTCCAGCTGCTAACCAGCAGGtCTGTGGTTTGAGCCCGTCCACAGCA Str: >>..>>>..>>.>........<.<<..>..>.......<..<.......>>>>.......<<<<<<<..<<. gi|408541800|gb|JH947132.1|.trna14 (11300118-11300189) Length: 72 bp Type: Gly Anticodon: GCC at 33-35 (11300150-11300152) Score: 22.19 Possible pseudogene: HMM Sc=30.72 Sec struct Sc=-8.53 * | * | * | * | * | * | * | Seq: GCTCTGGTGACCTAGTGGTAAGGAGTTGCACTGCCAAGCCAAAGGcAGGCAGTTCAAATCCATCCACCAGCT Str: >>>...>...>>>.......<<<..>>>...........<<<.....>>..>.......<..<<<...<<<. gi|408541800|gb|JH947132.1|.trna15 (11644295-11644368) Length: 74 bp Type: Ser Anticodon: GCT at 35-37 (11644329-11644331) Score: 31.09 Possible pseudogene: HMM Sc=31.37 Sec struct Sc=-0.28 * | * | * | * | * | * | * | Seq: CCTTGGGTGGTATAAACGGTaAACATATTTGCCTGCTAACTAAAAGGtTGGTGGTTCAAATCCACCCAGAGGTA Str: .>>>..>..>>.>.........<.<<.>>>>.........<<<<.....>>>>>.......<<<<<<..<<<.. gi|408541800|gb|JH947132.1|.trna16 (12811082-12811151) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (12811114-12811116) Score: 21.57 Possible pseudogene: HMM Sc=25.96 Sec struct Sc=-4.39 * | * | * | * | * | * | * Seq: CCTCTGGTGGCCTAGTGGCAAGGAGCTGCACTGCAATCCCAGAGGtgAGCGGTTCGAATCCACCAGATGC Str: >.>>>>>...>>>.......<<<..>>>...........<<<........>>.......<<.<<<<<.<. gi|408541800|gb|JH947132.1|.trna17 (13291623-13291693) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (13291655-13291657) Score: 20.88 Possible pseudogene: HMM Sc=27.82 Sec struct Sc=-6.94 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGAACTGCAATCCCAGAGGtATGTGGTTCGAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541800|gb|JH947132.1|.trna18 (13972615-13972685) Length: 71 bp Type: Gln Anticodon: TTG at 34-36 (13972648-13972650) Score: 25.71 * | * | * | * | * | * | * | Seq: GCTATGTTGGCAGAGTGTGtAATGTGTTGGGCTTTGAACCAAATGtTGGTGGTTCAAATGCACCAATCTCT Str: >..>>.>..>>>..........<<<.>>.>>.......<<.<<....>>>>.........<<<<<<<..<. gi|408541800|gb|JH947132.1|.trna19 (14058057-14058127) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (14058089-14058091) Score: 21.29 Possible pseudogene: HMM Sc=35.93 Sec struct Sc=-14.64 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtACACGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<........>>.......<<.<<<<<.<<. gi|408541800|gb|JH947132.1|.trna20 (14074780-14074845) Length: 66 bp Type: Gly Anticodon: TCC at 30-32 (14074809-14074811) Score: 20.75 * | * | * | * | * | * | * Seq: TGGGTGGGTCAGTGGTAGAACACTTGCCTTCCATGCAGGAGACCTGAGTTTGATCCCTAACATCAA Str: >>>>..>.>>.......<<.<.>>>>>.......<<<<<.....>>.>.......<.<<.<.<<<. gi|408541800|gb|JH947132.1|.trna21 (14613812-14613884) Length: 73 bp Type: Gly Anticodon: GCC at 33-35 (14613844-14613846) Score: 21.49 Possible pseudogene: HMM Sc=20.25 Sec struct Sc=1.24 * | * | * | * | * | * | * | Seq: GCTCTGGTGACCTAGTGGTAAGGAGTTGCCCTGCCAATCCAAAGGcATGTAGTTCAAATCCACcACCTGCTCC Str: >..>.>>...>>>.......<<<..>>>...........<<<.....>>>.>.......<.<<.<<<.<..<. gi|408541800|gb|JH947132.1|.trna22 (15629388-15629456) Length: 69 bp Type: Leu Anticodon: CAA at 52-54 (15629439-15629441) Score: 21.51 * | * | * | * | * | * | * Seq: GGTGGCTTAGTGGTgtAAGGAATTGTGCTGTCAACCCAAAGGtAAGTGGTTCAAATCCACCAGCTACTC Str: >>>>>>>...............>>>.>.......<.<<<......>>>>.......<<<<.<<<<<<<. gi|408541800|gb|JH947132.1|.trna23 (15716144-15716215) Length: 72 bp Type: Ser Anticodon: ACT at 33-35 (15716176-15716178) Score: 26.27 Possible pseudogene: HMM Sc=33.97 Sec struct Sc=-7.70 * | * | * | * | * | * | * | Seq: ACCCTTGTGGCACAATGGTtAGGCACTTGGCTACTAATCAAAAGGtTGGTGGTTCAAACTCACCCAGCAGCT Str: .>..>>>..>>.>........<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<..<.. gi|408541800|gb|JH947132.1|.trna24 (15741876-15741946) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (15741908-15741910) Score: 20.25 Possible pseudogene: HMM Sc=21.32 Sec struct Sc=-1.07 * | * | * | * | * | * | * | Seq: GCTCTGGTGTCCTAGTGGCAAGAAGCTGCACTGCAATCCCAGAGGCgTATGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541800|gb|JH947132.1|.trna25 (15783454-15783523) Length: 70 bp Type: Ala Anticodon: GGC at 33-35 (15783486-15783488) Score: 21.17 Possible pseudogene: HMM Sc=24.61 Sec struct Sc=-3.44 * | * | * | * | * | * | * Seq: TCTCTGGTAGTCTAGTGGTAAGGCGTTGCACTGGCAACCCAAAGAtATGTGGTTCAAATGCACCAGCTAG Str: >..>>>>..>>>>.......<<<<.>>>...........<<<.......>>.........<<<<<<..<. gi|408541800|gb|JH947132.1|.trna26 (16474359-16474427) Length: 69 bp Type: Asp Anticodon: GTC at 33-35 (16474391-16474393) Score: 27.94 Possible pseudogene: HMM Sc=31.78 Sec struct Sc=-3.84 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGCGGTAAGGAATTGCACTGTCAACCCAAAGGCGTGGTTCGAATCCACCAGCTGCT Str: >>..>.>...>>>.......<<<..>>>...........<<<....>>>>.......<<<<<.<..<<. gi|408541800|gb|JH947132.1|.trna27 (16568410-16568479) Length: 70 bp Type: Ile Anticodon: GAT at 33-35 (16568442-16568444) Score: 21.15 Possible pseudogene: HMM Sc=19.56 Sec struct Sc=1.59 * | * | * | * | * | * | * Seq: TCTTTGGTGGCCTAGGGGTAAGGAGTTGTGCTGATAACCCAAAGGTGCACAGTTCAAATCCACTAACTAA Str: >..>>>>...>>>.......<<<..>>>.>.......<.<<<..>>><<<.>.......<..<<<<..<. gi|408541800|gb|JH947132.1|.trna28 (16730403-16730475) Length: 73 bp Type: Asn Anticodon: GTT at 35-37 (16730437-16730439) Score: 24.73 Possible pseudogene: HMM Sc=38.35 Sec struct Sc=-13.62 * | * | * | * | * | * | * | Seq: GTCTGGGTGGTACAGCTGGTtAATGTGATTGACTGTTGACCAAGAGGtTGGAAGTTCAAGTCTACCTGGGAGC Str: .>>>.>>..>>>...........<<<..>>>.........<<<......>.>.>.......<<.<<<.<<<.. gi|408541800|gb|JH947132.1|.trna29 (16868359-16868429) Length: 71 bp Type: Gly Anticodon: ACC at 33-35 (16868391-16868393) Score: 22.82 Possible pseudogene: HMM Sc=22.86 Sec struct Sc=-0.04 * | * | * | * | * | * | * | Seq: GCACTGATGGCCTAGTGGTAAGGAGTTGCATTACCAACCCAAAGACATGtAGTTCGAATCCATCAAATGCT Str: >>>.>.....>>>.......<<<..>>>...........<<<....>>>..>.......<<<<..<.<<<. gi|408541800|gb|JH947132.1|.trna30 (17441289-17441362) Length: 74 bp Type: Gly Anticodon: GCC at 33-35 (17441321-17441323) Score: 20.68 Possible pseudogene: HMM Sc=29.21 Sec struct Sc=-8.53 * | * | * | * | * | * | * | Seq: AATCTGGTGGCTTAGTGGTAAGGAATTGGACTGCCAATGCAAAGGtGCGTGGTTCAAATCTACcaGCTGTTCTG Str: >...>>>...>>>.......<<<..>>>.>.......<.<<<.....>>>>>.......<<<<..<<<<...<. gi|408541800|gb|JH947132.1|.trna31 (18000742-18000814) Length: 73 bp Type: Met Anticodon: CAT at 34-36 (18000775-18000777) Score: 77.15 * | * | * | * | * | * | * | Seq: GCCTCGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCTGAAGGtCGTGAGTTCGACCCTCACACGGGGCA Str: >>>>>>>..>>>>........<<<<.>>>>.........<<<<.....>>>>>.......<<<<<<<<<<<<. gi|408541800|gb|JH947132.1|.trna32 (18438984-18439062) Length: 79 bp Type: Gly Anticodon: GCC at 33-35 (18439016-18439018) Score: 21.91 * | * | * | * | * | * | * | * Seq: TCTATGGTGACTTAGTGGTAAGGAGCTGGGCTGCCAATCCAGAGGCACaCAGTTCAAATccaccagCTGcTCCATGGGA Str: >>>>>>>...>>>.......<<<..>>>>>.......<<<<<....>..>>>..............<<<.<<<<<<<<. gi|408541800|gb|JH947132.1|.trna33 (19125111-19125179) Length: 69 bp Type: Gly Anticodon: GCC at 34-36 (19125144-19125146) Score: 23.42 Possible pseudogene: HMM Sc=0.59 Sec struct Sc=22.83 * | * | * | * | * | * | * Seq: AGCTCTCaTGGCTTAGCGGTAAGGCATTGCACTGCCATTGCAAAGtGCACAGTTTGAATCTATGAGCTG Str: >>>>......>>>>.......<<<<.>>>>>.......<<<<<....>>.>>.......<<.<<<<<<. gi|408541800|gb|JH947132.1|.trna34 (19787811-19787880) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (19787843-19787845) Score: 20.74 Possible pseudogene: HMM Sc=30.61 Sec struct Sc=-9.87 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTGGTAGGAAACTGCACTGCAATCCCAGAGGtgTGTGGTTCAAATCCACCAGATGG Str: ..>>>>>....>>.......<<...>>>...........<<<.......>>>.......<<<<<<<<... gi|408541800|gb|JH947132.1|.trna35 (19888708-19888781) Length: 74 bp Type: Gly Anticodon: GCC at 34-36 (19888741-19888743) Score: 25.23 Possible pseudogene: HMM Sc=27.91 Sec struct Sc=-2.68 * | * | * | * | * | * | * | Seq: GGCCAGGTGGTCTAGTTGGTCAGGCATTATACTGCCAACCTTAAGGCAaGTGGTTCGAATCCACcAGCTGGCCC Str: >>>>>>...>>>>........<<<<.>.>...........<.<......>>>>.......<<<<...<<<<<<. gi|408541800|gb|JH947132.1|.trna36 (20290216-20290287) Length: 72 bp Type: Ser Anticodon: GCT at 33-35 (20290248-20290250) Score: 25.94 Possible pseudogene: HMM Sc=23.55 Sec struct Sc=2.39 * | * | * | * | * | * | * | Seq: GCCCTTGTGGCACAGTGGTCCCATGCTTGGATGCTCACCAAAAGCtTGGTGGTTCGAAACCACCCAGTGGCT Str: >>>.>>>..>.............<..>>>>.......<<<<......>>>>>.......<<<<<<<<.<<<. gi|408541800|gb|JH947132.1|.trna37 (20467854-20467920) Length: 67 bp Type: Ser Anticodon: CGA at 50-52 (20467903-20467905) Score: 24.90 * | * | * | * | * | * | * Seq: GGTGGCTTAGTGGTAAGTAGTTAGGCTGCCAAGCCAAAGGcAGGTGGTTCGAATCCACCAGCTACTC Str: >>>>>>>.............>>.>.........<.<<.....>>>>>.......<<<<<<<<<<<<. gi|408541800|gb|JH947132.1|.trna38 (20805473-20805543) Length: 71 bp Type: Gly Anticodon: TCC at 33-35 (20805505-20805507) Score: 34.22 Possible pseudogene: HMM Sc=38.86 Sec struct Sc=-4.64 * | * | * | * | * | * | * | Seq: GCAGTGGTGGGGTAGTGGTAGAATTCTGGCCTTCCATGCAGGAGATCTGGGTTCAATTTCTAGCCAATGCA Str: >>>.>>>..>..>.......<..<.>>.>>.......<<.<<....>>>>>.......<<<<<<<<.<<<. gi|408541800|gb|JH947132.1|.trna39 (20885107-20885176) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (20885139-20885141) Score: 23.32 Possible pseudogene: HMM Sc=28.60 Sec struct Sc=-5.28 * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTGGCAAGAAGCTGCGCTGCAATCCCAGAAGtATTGGTTCGAATCCACCAGAtGCT Str: >>>>>>>....>>.......<<...>>>.>.......<.<<<......>>>.......<<<<<<<<.<<. gi|408541800|gb|JH947132.1|.trna40 (21085470-21085547) Length: 78 bp Type: Gly Anticodon: GCC at 34-36 (21085503-21085505) Score: 25.02 * | * | * | * | * | * | * | * Seq: GCTCTGGTGGCCTAGTGGGtAAGGAGTTGTGCTGCCAACTCAAAGGCACGCTGGTTCTAATCCAGCttctCCATGGGA Str: .>>.>>>...>>>........<<<..>>>.>.......<.<<<..><..>>>>>.......<<<<<....<<<.<<.. gi|408541800|gb|JH947132.1|.trna41 (21123014-21123084) Length: 71 bp Type: Gly Anticodon: ACC at 33-35 (21123046-21123048) Score: 22.59 Possible pseudogene: HMM Sc=28.85 Sec struct Sc=-6.26 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCTTAGTGGTAAGGCCCTGTGCTACCAACCCAAAGGCATGtAGTTCAAATCCATGAGTGGCA Str: >>>.>....>>>>.......<<<<..>>.>.......<.<<.....>>>..>.......<<<<..<.<<<. gi|408541800|gb|JH947132.1|.trna42 (21973266-21973344) Length: 79 bp Type: Gly Anticodon: GCC at 34-36 (21973299-21973301) Score: 26.16 * | * | * | * | * | * | * | * Seq: GCTCTGGTGGCCGAGTGGGtAAGGAGTTGCACTGCCAATGCAAAGGCAGGTGgTTCAGATTCACTAGCTGCTCAGAGAG Str: .>>>>>>...>>..........<<..>>>>>.......<<<<<..>>..<<....>>>.........<<<.<<<<<<.. gi|408541800|gb|JH947132.1|.trna43 (22034157-22034227) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (22034189-22034191) Score: 21.29 Possible pseudogene: HMM Sc=35.93 Sec struct Sc=-14.64 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtACACGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<........>>.......<<.<<<<<.<<. gi|408541800|gb|JH947132.1|.trna44 (22080356-22080432) Length: 77 bp Type: Cys Anticodon: GCA at 36-38 (22080391-22080393) Score: 33.98 * | * | * | * | * | * | * | * Seq: GGAGCtttGGTGGTCTAGTGGTAAGATATTGCACTGCAGAAGCAAAGGtACATGGTTCAAATCCACcaGCTGCTCCA Str: >>>>>...>>..>>>>.......<<<<.>>>>.........<<<<.....>.>>>.......<<<...<<<<<<<<. gi|408541800|gb|JH947132.1|.trna45 (22096232-22096302) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (22096264-22096266) Score: 21.68 Possible pseudogene: HMM Sc=31.99 Sec struct Sc=-10.31 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtATGCAGTTCGAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.....>>..>.......<<<<<<<<.<<. gi|408541800|gb|JH947132.1|.trna46 (23023321-23023388) Length: 68 bp Type: Arg Anticodon: CCT at 29-31 (23023349-23023351) Score: 21.71 * | * | * | * | * | * | * Seq: GATGGCATGGCGGGTtAGGCTTTGGGCTCCTAACTGAAAGGcCGGCGGTTCAAGTCCACCAGCTGTTG Str: >>>>>>...>>.......<<.>>.>>.......<<.<<.....>>.>>.......<<.<<.<<<<<<. gi|408541800|gb|JH947132.1|.trna47 (23133419-23133488) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (23133451-23133453) Score: 23.77 Possible pseudogene: HMM Sc=28.56 Sec struct Sc=-4.79 * | * | * | * | * | * | * Seq: CCTCTGGTGGCCTAGTGGCAAGAAGCTGCACTGCAATCCCAGAGGtCTGTGGTTCAAATCCACCAGATGC Str: >.>>>>>....>>.......<<...>>>...........<<<.......>>>.......<<<<<<<<.<. gi|408541800|gb|JH947132.1|.trna48 (23335070-23335139) Length: 70 bp Type: Ser Anticodon: GCT at 33-35 (23335102-23335104) Score: 23.18 Possible pseudogene: HMM Sc=26.53 Sec struct Sc=-3.35 * | * | * | * | * | * | * Seq: ACTCTGGTGGCCTAGTGGTAAGGAGTTGCACTGCTAACCCAAAGGCaTGTGGTTCGAATCCACCAGCTAC Str: ...>>>>...>>>.......<<<..>>>...........<<<.......>>>.......<<<<<<<.... gi|408541800|gb|JH947132.1|.trna49 (23740900-23740971) Length: 72 bp Type: Tyr Anticodon: GTA at 33-35 (23740932-23740934) Score: 26.90 * | * | * | * | * | * | * | Seq: AACAGTGTGTCCTAGTGGCAAGGAGCTGCGCTGTAATCCCATAGGcATGTGGTTCGAATCCACCAGCTGCTC Str: >.>>>>...>>>>.......<<<<..>>.>.......<.<<.......>>>>.......<<<<..<<<<.<. gi|408541800|gb|JH947132.1|.trna50 (23978223-23978292) Length: 70 bp Type: Gly Anticodon: GCC at 34-36 (23978256-23978258) Score: 27.24 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCTTAGTGGTAAGGAGTTGTGCTGCCAACCCAAAGGCaTGTGGTTCAAATCCACCAGCTA Str: >>>>..>>...>>>.......<<<..>>>.>.......<.<<<.......>>>.......<<<<<<<<<. gi|408541800|gb|JH947132.1|.trna51 (23993729-23993805) Length: 77 bp Type: Gly Anticodon: GCC at 36-38 (23993764-23993766) Score: 30.18 Possible pseudogene: HMM Sc=2.91 Sec struct Sc=27.27 * | * | * | * | * | * | * | * Seq: GGAGCTCTGGTCGcttAGTGGTAAGACATTGTGCTGCCAACACAAAGGtAATGTGaTTCAAATcCACAGCAGCTCCA Str: >>>>>>...>>>............<<<.>>>>>.......<<<<<......>>>>.........<<<<..<<<<<<. gi|408541800|gb|JH947132.1|.trna52 (28073467-28073540) Length: 74 bp Type: Asn Anticodon: GTT at 35-37 (28073501-28073503) Score: 42.79 * | * | * | * | * | * | * | Seq: GTCTCTGTGGCACAGTCAGTtAGCACATTCAGCTGTTAACTGGAAGTtTGGTGGTTTGAGCCCACCCAGGGACA Str: >>>>>>>..>..>.........<..<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<. gi|408541800|gb|JH947132.1|.trna53 (30637463-30637532) Length: 70 bp Type: Gly Anticodon: TCC at 33-35 (30637495-30637497) Score: 20.26 * | * | * | * | * | * | * Seq: GGAGTGATGGTTTAGTGGTAGAGTGGTTGTCTTCCATTCTACTACCTGAATTTGAGTCTCAGGCAATACA Str: >.>.>>...>>>>.......<<<<.>>.>.........<.<<...>>>>.........<<<<.<<.<.<. gi|408541800|gb|JH947132.1|.trna54 (31655758-31655827) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (31655790-31655792) Score: 21.11 * | * | * | * | * | * | * Seq: CCTTTGATGATTTAGTGGTAAAGAGTTGTGCTGCAAACCCAAAGGCAtGGAGTTCAAATCTTTCAGCTGC Str: >..>>>>...>>>.......<<<..>>>.>.......<.<<<....>...>>.......<<<<<<<..<. gi|408541800|gb|JH947132.1|.trna55 (32577731-32577798) Length: 68 bp Type: Ala Anticodon: GGC at 32-34 (32577762-32577764) Score: 20.33 Possible pseudogene: HMM Sc=8.61 Sec struct Sc=11.72 * | * | * | * | * | * | * Seq: CTCTGATGGCCTAGTGGTAAAGAGTTGTGGTGGCAACCCAAAGGtATGTGGTTCAAATCCACAAGATG Str: .>>>.....>.>.......<.<..>>>.>.......<.<<<.....>>>>>.......<<<<<<<<.. gi|408541800|gb|JH947132.1|.trna56 (32581623-32581693) Length: 71 bp Type: Gly Anticodon: GCC at 33-35 (32581655-32581657) Score: 31.37 * | * | * | * | * | * | * | Seq: GCTCTGGTAGCCTAGTGGTAAGGAGTTGGACTGCCAATTCAAAGACaTATGGTTCAAATCTACCAGAtGCT Str: >>>>>>>...>>>.......<<<..>>>>>.......<<<<<.......>>>.......<<<<<<<<.<<. gi|408541800|gb|JH947132.1|.trna57 (35002492-35002559) Length: 68 bp Type: Ser Anticodon: ACT at 33-35 (35002524-35002526) Score: 20.04 Possible pseudogene: HMM Sc=18.54 Sec struct Sc=1.50 * | * | * | * | * | * | * Seq: GTTCTTGTGGGTCAGTGGTAAGGAATTGCACTACTAATGCAAAGGTACAtCGTTCGAATCCACGAGCT Str: >>>>.>>....>.........<...>>>>>.......<<<<<..>><<...>.......<<<.<<<<. gi|408541800|gb|JH947132.1|.trna58 (35403123-35403199) Length: 77 bp Type: Gly Anticodon: ACC at 38-40 (35403160-35403162) Score: 24.58 Possible pseudogene: HMM Sc=8.98 Sec struct Sc=15.60 * | * | * | * | * | * | * | * Seq: TGGAATTctagTGGACTAGTGGAtAAGAAGTTGTACTACCAATCCAAAGGcAGGTGGTTCAAATCCACCAACTTCAA Str: >>>>.>>........>>........<<...>>>.>.......<.<<<.....>>>>>.......<<<<<<<.<<<<. gi|408541800|gb|JH947132.1|.trna59 (35716640-35716709) Length: 70 bp Type: Cys Anticodon: GCA at 33-35 (35716672-35716674) Score: 20.26 Possible pseudogene: HMM Sc=20.05 Sec struct Sc=0.21 * | * | * | * | * | * | * Seq: GCTCTGATGGTCTAGTGGCAAGAAGCTGTGCTGCAATCCCAGAGGTGCACAGTTCGAATCCACCAGATCC Str: >.>>>>....>>>.......<<<..>>>.>.......<.<<<..>>><<<.>.......<...<<<<.<. gi|408541800|gb|JH947132.1|.trna60 (35903206-35903275) Length: 70 bp Type: Ala Anticodon: GGC at 34-36 (35903239-35903241) Score: 27.75 * | * | * | * | * | * | * Seq: AGCTcTGGTGGCTGAGTGGTAAGGAGTTGGGCTGGCAACCCAGAGGtATACTGTTCGAATCcACCAGCTG Str: >>>>..>>...>>.........<<..>>>>>.......<<<<<.....>...>.......<.<<<<<<<. gi|408541800|gb|JH947132.1|.trna61 (35916783-35916853) Length: 71 bp Type: Ala Anticodon: TGC at 33-35 (35916815-35916817) Score: 20.58 Possible pseudogene: HMM Sc=20.27 Sec struct Sc=0.31 * | * | * | * | * | * | * | Seq: ACAATGGTGGTTAAGTGGTAGAGTTCTCATTTTGCATGTGAGAGATCTGGGATCAATGCCCAGCTAACACA Str: ....>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<..... gi|408541800|gb|JH947132.1|.trna62 (37657458-37657531) Length: 74 bp Type: Undet Anticodon: ??? at 0-0 (0-0) Score: 21.04 Possible pseudogene: HMM Sc=19.45 Sec struct Sc=1.59 * | * | * | * | * | * | * | Seq: GCCCTGGTGCTCTAGTGGTcAGGAGATTCACTCCCAACCAAACGGtACATGGTTCGAATCtgCAAGCCACGGTC Str: >>>.>>>..>>>>........<<<<.>>............<<.....>.>>>.......<..<<.<<<<.<<<. gi|408541800|gb|JH947132.1|.trna63 (38081189-38081263) Length: 75 bp Type: Ala Anticodon: GGC at 37-39 (38081225-38081227) Score: 23.18 Possible pseudogene: HMM Sc=-2.17 Sec struct Sc=25.35 * | * | * | * | * | * | * | Seq: GCAGCTCtggTGTCCTAGTCAGCAGGGAGTTGAGCTGGCAACACAAAGGcAGGGGGTTCAAATCCACTAGCTGCT Str: >>>>>>......>>>>........<<<<.>>>.>.......<.<<<.....>>.>>.......<<.<<<<<<<<. gi|408541800|gb|JH947132.1|.trna64 (38553818-38553890) Length: 73 bp Type: Gly Anticodon: GCC at 33-35 (38553850-38553852) Score: 22.80 Possible pseudogene: HMM Sc=17.84 Sec struct Sc=4.96 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTTTAGTGGCAAGAAATTGTGCTGCCAACACAAAGAtATGTGGTTCAAATCCACcAGATGTGCA Str: >>.>......>>>.......<<<..>>>>>.......<<<<<.....>>>>>.......<<<<.<...<.<<. gi|408541800|gb|JH947132.1|.trna65 (39893932-39894010) Length: 79 bp Type: Asp Anticodon: GTC at 33-35 (39893964-39893966) Score: 24.32 Possible pseudogene: HMM Sc=3.13 Sec struct Sc=21.19 * | * | * | * | * | * | * | * Seq: GCTTTGGTGCCTTAGTGGTAAGGAGTTGGGTGGTCAACACAAAGGcAAGCAGTTCAAATccaccagCTGTTCCAGAGCG Str: >>>>>>>...>>>.......<<<..>>>.>.......<.<<<.....>>>>>..............<<<<<<<<<<<<. gi|408541800|gb|JH947132.1|.trna66 (40343970-40344042) Length: 73 bp Type: Gly Anticodon: GCC at 33-35 (40344002-40344004) Score: 21.64 * | * | * | * | * | * | * | Seq: ACTCTGGTGGCCTAATGGTGAGGAGTTGTACTGCCATTGCAAAGCCCGTGGTTCAAATCCACcaGCTCCTGTA Str: >>...>>...>>>.......<<<..>>>>>.......<<<<<....>>>>>.......<<<<..<<<...<<. gi|408541800|gb|JH947132.1|.trna67 (41766697-41766769) Length: 73 bp Type: Gly Anticodon: GCC at 34-36 (41766730-41766732) Score: 22.43 Possible pseudogene: HMM Sc=21.67 Sec struct Sc=0.76 * | * | * | * | * | * | * | Seq: ATCCTGGTGGCCTAGTGGTtAGGGAGTGGCTCTGCCAGTTTCAAGGcAGGTGGTTCAAATCTACTCTTGGGTG Str: >>>>.>>...>>>........<<<..>>>...........<<<.....>>>>>.......<<<<<<<.<<<<. gi|408541800|gb|JH947132.1|.trna68 (40771010-40770936) Length: 75 bp Type: Gly Anticodon: GCC at 35-37 (40770976-40770974) Score: 20.15 * | * | * | * | * | * | * | Seq: GGGCtcTGGTGGCTTTGTGGTAAGGAATTGTATTGCCAATGCAAAGGtACATGGTTCAAATCCATcaGCTGCTCT Str: >>>>...>>...>>>.......<<<..>>>>>.......<<<<<.....>>>>>.......<<<<..<<<<<<<. gi|408541800|gb|JH947132.1|.trna69 (36923483-36923411) Length: 73 bp Type: Cys Anticodon: ACA at 33-35 (36923451-36923449) Score: 23.91 * | * | * | * | * | * | * | Seq: GCTCTGGTGGTCTAGTGGTAAGAAACTGTGCTACAATCTCAAAGGtCTGTGATTCAAATTCACcAGCTGATCC Str: >.>>.>....>>>.......<<<...>>.>.......<.<<......>>>>>.......<<<<.<.<.<<.<. gi|408541800|gb|JH947132.1|.trna70 (34390898-34390828) Length: 71 bp Type: Gly Anticodon: CCC at 33-35 (34390866-34390864) Score: 20.53 Possible pseudogene: HMM Sc=16.45 Sec struct Sc=4.08 * | * | * | * | * | * | * | Seq: GCTCTGGTGACCAAGTGGTAAAGAGTTGGACTCCCAAACCAAAGGcAGATAGTTTGAATCCACCAAGTGCT Str: >>.>>.>...>...........<..>>>>.........<<<<.....>.>.>.......<.<<<.<<.<<. gi|408541800|gb|JH947132.1|.trna71 (33320092-33320020) Length: 73 bp Type: Gly Anticodon: GCC at 35-37 (33320058-33320056) Score: 22.55 * | * | * | * | * | * | * | Seq: GCTGTGGTAGCCTAGTGGAtAAGGAGTTGGcGCTGCCATCCCAGAAGCaGGTGGTTTGAATCCACCAGCAGCT Str: >>>>>.>...>>>........<<<..>>>>.>.......<<<<<......>>>>.......<<<<<.<<<<<. gi|408541800|gb|JH947132.1|.trna72 (32377638-32377567) Length: 72 bp Type: Ser Anticodon: ACT at 33-35 (32377606-32377604) Score: 20.38 Possible pseudogene: HMM Sc=35.62 Sec struct Sc=-15.24 * | * | * | * | * | * | * | Seq: TCCTGATGGTGTAGTGGTtAAAGCACGTGGCTACTGACCAAAAGAtCAGTGGTTCAAGTCATTCTGTGGGAG Str: >>>>>>..>>.>........<.<<...>>>.......<<<........>..>.......<..<.<.<<<<<. gi|408541800|gb|JH947132.1|.trna73 (31280778-31280708) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (31280746-31280744) Score: 22.02 Possible pseudogene: HMM Sc=28.14 Sec struct Sc=-6.12 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGTTATGTGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.......>>>.......<<<<<<<<.<<. gi|408541800|gb|JH947132.1|.trna74 (30658294-30658222) Length: 73 bp Type: Asp Anticodon: GTC at 33-35 (30658262-30658260) Score: 28.65 Possible pseudogene: HMM Sc=33.00 Sec struct Sc=-4.35 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGTAAGGAATTACACTGTCAATCCAAAGGtATGTGGTTCAAATCCATcAGCTGATCC Str: >.>>.>....>>>.......<<<..>>..>.......<..<<.....>>>>>.......<<<<.<.<.<<.<. gi|408541800|gb|JH947132.1|.trna75 (29840990-29840916) Length: 75 bp Type: Val Anticodon: GAC at 36-38 (29840955-29840953) Score: 21.68 Possible pseudogene: HMM Sc=17.92 Sec struct Sc=3.76 * | * | * | * | * | * | * | Seq: AGAACTTTggtGGCCTAGTGGTAAGGAGTTGCACTGACAACTCAAAGGtAGGTGGTTCAAATTCACCAGCTGCTT Str: >>.>.>>......>>>.......<<<..>>>...........<<<.....>>>>>.......<<<<<<<.<.<<. gi|408541800|gb|JH947132.1|.trna76 (28326144-28326072) Length: 73 bp Type: Cys Anticodon: GCA at 32-34 (28326113-28326111) Score: 25.38 Possible pseudogene: HMM Sc=5.80 Sec struct Sc=19.58 * | * | * | * | * | * | * | Seq: AGACAGTGACCTAGTGGTAAGGACTTGGACTGCAACTCCAAAGAtATGTGGATCAAATCTACcaGCTGCTCTG Str: >>>>>>...>>>.......<<<..>>>>>.......<<<<<.....>>>>>.......<<<<..<<<<.<<<. gi|408541800|gb|JH947132.1|.trna77 (27453777-27453704) Length: 74 bp Type: Ser Anticodon: GCT at 34-36 (27453744-27453742) Score: 22.98 Possible pseudogene: HMM Sc=25.35 Sec struct Sc=-2.37 * | * | * | * | * | * | * | Seq: ACTTTGGTGGCACAGTTGGTtAAGCATTGGGTTGCTATCCAAAAGGtCAGTGGATCAAACCtCACTTCTAACTT Str: >.>>.>>..>>............<<.>>.>>.......<<.<<.....>>>>>.......<.<<<<<<.<<.<. gi|408541800|gb|JH947132.1|.trna78 (27186622-27186552) Length: 71 bp Type: Cys Anticodon: GCA at 33-35 (27186590-27186588) Score: 22.87 Possible pseudogene: HMM Sc=33.29 Sec struct Sc=-10.42 * | * | * | * | * | * | * | Seq: GCTCTGGTGGCCTAGTGGCAAGACGCTGCACTGCAATCCCAGAGGtATGCGGTTCAAATCCACCAGAtGCT Str: >>>>>>>..>.>>.......<<.<.>>>...........<<<.....>..>>.......<<<<<<<<.<<.