No selenoprotein could be predicted in your sequence!

SECIS id: 1

Predicted by: Infernal (score 14.56)
Covels score: 9.41
Free Energy of structure: -11.64
Target name: gi|408541756|gb|JH947176.1|:subseq_9616050,419670_
Positions on target: 269041-269116 Strand: -
SECIS grade: B

  SEQ  AGAGUUGAACUUUAGAUGAAUACAUUUGGCUAAAUUAUUCUGGUGGCUUAGUGGUAAGAAGCUCUGCUUCAAUCCC
  SS   .({((((((.......([[{(((((({(((((...........)))))}))).)))}]]).......))))))}).


SECIS id: 2

Predicted by: Infernal (score 10.48)
Covels score: 13.5
Free Energy of structure: -8.78
Target name: gi|408541756|gb|JH947176.1|:subseq_9616050,419670_
Positions on target: 315212-315285 Strand: -
SECIS grade: C

  SEQ  CUAGAGUCAACUUUCAUGACAUACAUGAAGCAAAAUCUUUAGAAUCUUCAACUGCUGAUGUGGAAUGACUUAAA
  SS   .({((((((.......{[[{{(({{(((((...............)))))}}))}}]]}......))))))}).


SECIS id: 3

Predicted by: Infernal (score 10.03)
Covels score: 1.28
Free Energy of structure: -8.68
Target name: gi|408541756|gb|JH947176.1|:subseq_9616050,419670_
Positions on target: 288287-288368 Strand: -
SECIS grade: B

  SEQ  UUAAGGACUUCUCCAAAGUACUGAAGAGCAAUGAUGUCACUCUGGAGACUAAGGUGUGGCUGAUACAGGCCAUGGUCUUUGC
  SS   .((((((((......................{[[{((((({((.........))})))))}]]}.........)))))))).


SEQUANCIA FASTA

>SECIS.1 chromosome:gi|408541756|gb|JH947176.1|:subseq_9616050,419670_ strand:- positions:269041-269116
AGAGUUGAACUUUAGAUGAAUACAUUUGGCUAAAUUAUUCUGGUGGCUUAGUGGUAAGAAGCUCUGCUUCAAUCCC
>SECIS.2 chromosome:gi|408541756|gb|JH947176.1|:subseq_9616050,419670_ strand:- positions:315212-315285
CUAGAGUCAACUUUCAUGACAUACAUGAAGCAAAAUCUUUAGAAUCUUCAACUGCUGAUGUGGAAUGACUUAAA
>SECIS.3 chromosome:gi|408541756|gb|JH947176.1|:subseq_9616050,419670_ strand:- positions:288287-288368
UUAAGGACUUCUCCAAAGUACUGAAGAGCAAUGAUGUCACUCUGGAGACUAAGGUGUGGCUGAUACAGGCCAUGGUCUUUGC